RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 POTEMA6NI47 508 aa11.83□□□□□ -0.52
CDHR3-209ENST00000472116 RPS6KA5O75582 802 aa11.83□□□□□ -0.52
CDHR3-209ENST00000472116 EPCAMP16422 314 aa11.83□□□□□ -0.52
CDHR3-209ENST00000472116 HOXA13P31271 388 aaPredicted RBP11.83□□□□□ -0.52
CDHR3-209ENST00000472116 KRT76Q01546 638 aa11.83□□□□□ -0.52
CDHR3-209ENST00000472116 PTPN14Q15678 1187 aa11.83□□□□□ -0.52
CDHR3-209ENST00000472116 TMEM266Q2M3C6 531 aa11.83□□□□□ -0.52
CDHR3-209ENST00000472116 IL31Q6EBC2 164 aa11.83□□□□□ -0.52
CDHR3-209ENST00000472116 KANK3Q6NY19 840 aa11.83□□□□□ -0.52
CDHR3-209ENST00000472116 POTEGQ6S5H5 508 aa11.83□□□□□ -0.52
CDHR3-209ENST00000472116 FCHSD1Q86WN1 690 aa11.83□□□□□ -0.52
CDHR3-209ENST00000472116 IL31RAQ8NI17 732 aa11.83□□□□□ -0.52
CDHR3-209ENST00000472116 TMEM169Q96HH4 297 aa11.83□□□□□ -0.52
CDHR3-209ENST00000472116 SEC62Q99442 399 aaKnown RBP11.83□□□□□ -0.52
CDHR3-209ENST00000472116 RGS18Q9NS28 235 aa11.83□□□□□ -0.52
CDHR3-209ENST00000472116 ANAPC4Q9UJX5 808 aa11.83□□□□□ -0.52
CDHR3-209ENST00000472116 GINS2Q9Y248 185 aa11.83□□□□□ -0.52
CDHR3-209ENST00000472116 TRIM6-TRIM34B2RNG4 842 aa11.82□□□□□ -0.52
CDHR3-209ENST00000472116 GCOM1H8Y6P7 765 aaPredicted RBP11.82□□□□□ -0.52
CDHR3-209ENST00000472116 POLR2MP0CAP2 368 aa11.82□□□□□ -0.52
CDHR3-209ENST00000472116 FGFR1P11362 822 aa11.82□□□□□ -0.52
CDHR3-209ENST00000472116 SHC2P98077 582 aa11.82□□□□□ -0.52
CDHR3-209ENST00000472116 SPEM2Q0P670 501 aa11.82□□□□□ -0.52
CDHR3-209ENST00000472116 TRAF1Q13077 416 aa11.82□□□□□ -0.52
CDHR3-209ENST00000472116 ASPRV1Q53RT3 343 aa11.82□□□□□ -0.52
CDHR3-209ENST00000472116 ELMSAN1Q6PJG2 1045 aa11.82□□□□□ -0.52
CDHR3-209ENST00000472116 SLC44A3Q8N4M1 653 aa11.82□□□□□ -0.52
CDHR3-209ENST00000472116 RSAD2Q8WXG1 361 aa11.82□□□□□ -0.52
CDHR3-209ENST00000472116 FOXQ1Q9C009 403 aa11.82□□□□□ -0.52
CDHR3-209ENST00000472116 TMX1Q9H3N1 280 aa11.82□□□□□ -0.52
CDHR3-209ENST00000472116 SMARCAD1Q9H4L7 1026 aa11.82□□□□□ -0.52
CDHR3-209ENST00000472116 BCAS3Q9H6U6 928 aa11.82□□□□□ -0.52
CDHR3-209ENST00000472116 ELAC1Q9H777 363 aaKnown RBP11.82□□□□□ -0.52
CDHR3-209ENST00000472116 KDM3AQ9Y4C1 1321 aa11.82□□□□□ -0.52
CDHR3-209ENST00000472116 SPATA31C2B4DYI2 1134 aa11.81□□□□□ -0.52
CDHR3-209ENST00000472116 GPR182O15218 404 aa11.81□□□□□ -0.52
CDHR3-209ENST00000472116 FOXD2O60548 495 aaPredicted RBP11.81□□□□□ -0.52
CDHR3-209ENST00000472116 PMLP29590 882 aa11.81□□□□□ -0.52
CDHR3-209ENST00000472116 PBX3P40426 434 aa11.81□□□□□ -0.52
CDHR3-209ENST00000472116 MAGEA9P43362 315 aa11.81□□□□□ -0.52
CDHR3-209ENST00000472116 ALDH7A1P49419 539 aaKnown RBP11.81□□□□□ -0.52
CDHR3-209ENST00000472116 GHRHRQ02643 423 aa11.81□□□□□ -0.52
CDHR3-209ENST00000472116 C15orf39Q6ZRI6 1047 aa11.81□□□□□ -0.52
CDHR3-209ENST00000472116 VPS52Q8N1B4 723 aa11.81□□□□□ -0.52
CDHR3-209ENST00000472116 NME8Q8N427 588 aa11.81□□□□□ -0.52
CDHR3-209ENST00000472116 ZBTB44Q8NCP5 570 aa11.81□□□□□ -0.52
CDHR3-209ENST00000472116 KAT14Q9H8E8 782 aa11.81□□□□□ -0.52
CDHR3-209ENST00000472116 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.81□□□□□ -0.52
CDHR3-209ENST00000472116 LAMA4Q16363 1823 aa11.81□□□□□ -0.52
CDHR3-209ENST00000472116 BAZ2BQ9UIF8 2168 aaKnown RBP11.81□□□□□ -0.52
CDHR3-209ENST00000472116 CARNS1A5YM72 827 aa11.8□□□□□ -0.52
CDHR3-209ENST00000472116 C9IYK1 514 aa11.8□□□□□ -0.52
CDHR3-209ENST00000472116 LRP3O75074 770 aa11.8□□□□□ -0.52
CDHR3-209ENST00000472116 FGRP09769 529 aa11.8□□□□□ -0.52
CDHR3-209ENST00000472116 PARP1P09874 1014 aaKnown RBP11.8□□□□□ -0.52
CDHR3-209ENST00000472116 RLBP1P12271 317 aa11.8□□□□□ -0.52
CDHR3-209ENST00000472116 METAP2P50579 478 aaKnown RBP eCLIP11.8□□□□□ -0.52
CDHR3-209ENST00000472116 CCDC178Q5BJE1 867 aa11.8□□□□□ -0.52
CDHR3-209ENST00000472116 MARCH8Q5T0T0 291 aa11.8□□□□□ -0.52
CDHR3-209ENST00000472116 NLRX1Q86UT6 975 aa11.8□□□□□ -0.52
CDHR3-209ENST00000472116 MAML2Q8IZL2 1156 aaPredicted RBP11.8□□□□□ -0.52
CDHR3-209ENST00000472116 MIER1Q8N108 512 aa11.8□□□□□ -0.52
CDHR3-209ENST00000472116 SLC39A11Q8N1S5 342 aa11.8□□□□□ -0.52
CDHR3-209ENST00000472116 PNMA1Q8ND90 353 aa11.8□□□□□ -0.52
CDHR3-209ENST00000472116 SEPT1Q8WYJ6 367 aa11.8□□□□□ -0.52
CDHR3-209ENST00000472116 INPP4AQ96PE3 977 aaPredicted RBP11.8□□□□□ -0.52
CDHR3-209ENST00000472116 SENP7Q9BQF6 1050 aa11.8□□□□□ -0.52
CDHR3-209ENST00000472116 PARD6AQ9NPB6 346 aa11.8□□□□□ -0.52
CDHR3-209ENST00000472116 RTEL1Q9NZ71 1219 aa11.8□□□□□ -0.52
CDHR3-209ENST00000472116 ZMIZ1Q9ULJ6 1067 aa11.8□□□□□ -0.52
CDHR3-209ENST00000472116 PCDHA2Q9Y5H9 948 aa11.8□□□□□ -0.52
CDHR3-209ENST00000472116 KANSL1LA0AUZ9 987 aa11.79□□□□□ -0.52
CDHR3-209ENST00000472116 MGEA5O60502 916 aa11.79□□□□□ -0.52
CDHR3-209ENST00000472116 LILRB5O75023 590 aa11.79□□□□□ -0.52
CDHR3-209ENST00000472116 PCP11498 1178 aaKnown RBP11.79□□□□□ -0.52
CDHR3-209ENST00000472116 INSRRP14616 1297 aa11.79□□□□□ -0.52
CDHR3-209ENST00000472116 TGM1P22735 817 aa11.79□□□□□ -0.52
CDHR3-209ENST00000472116 UBXN2BQ14CS0 331 aa11.79□□□□□ -0.52
CDHR3-209ENST00000472116 LAIR1Q6GTX8 287 aa11.79□□□□□ -0.52
CDHR3-209ENST00000472116 MFSD6Q6ZSS7 791 aa11.79□□□□□ -0.52
CDHR3-209ENST00000472116 SLC22A17Q8WUG5 538 aa11.79□□□□□ -0.52
CDHR3-209ENST00000472116 PHF12Q96QT6 1004 aa11.79□□□□□ -0.52
CDHR3-209ENST00000472116 EMILIN2Q9BXX0 1053 aa11.79□□□□□ -0.52
CDHR3-209ENST00000472116 MRPL9Q9BYD2 267 aaKnown RBP11.79□□□□□ -0.52
CDHR3-209ENST00000472116 FAM126AQ9BYI3 521 aaPredicted RBP11.79□□□□□ -0.52
CDHR3-209ENST00000472116 AZI2Q9H6S1 392 aa11.79□□□□□ -0.52
CDHR3-209ENST00000472116 JMJD4Q9H9V9 463 aa11.79□□□□□ -0.52
CDHR3-209ENST00000472116 ST3GAL5Q9UNP4 418 aa11.79□□□□□ -0.52
CDHR3-209ENST00000472116 IRAK3Q9Y616 596 aa11.79□□□□□ -0.52
CDHR3-209ENST00000472116 MTCL1Q9Y4B5 1905 aaKnown RBP11.79□□□□□ -0.52
CDHR3-209ENST00000472116 SETXQ7Z333 2677 aaKnown RBP11.78□□□□□ -0.52
CDHR3-209ENST00000472116 SMIM35A0A1B0GVV1 85 aa11.78□□□□□ -0.52
CDHR3-209ENST00000472116 OPLAHO14841 1288 aa11.78□□□□□ -0.52
CDHR3-209ENST00000472116 NCAM2O15394 837 aa11.78□□□□□ -0.52
CDHR3-209ENST00000472116 LRRN2O75325 713 aa11.78□□□□□ -0.52
CDHR3-209ENST00000472116 GLULP15104 373 aa11.78□□□□□ -0.52
CDHR3-209ENST00000472116 KLRC2P26717 231 aa11.78□□□□□ -0.52
CDHR3-209ENST00000472116 POLGP54098 1239 aaPredicted RBP11.78□□□□□ -0.52
CDHR3-209ENST00000472116 STARD6P59095 220 aa11.78□□□□□ -0.52
CDHR3-209ENST00000472116 ZMYM1Q5SVZ6 1142 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms