RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 TAF4O00268 1085 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 CPNE3O75131 537 aaKnown RBP5.26□□□□□ -1.57
LMNB1-205ENST00000472034 GLP2RO95838 553 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 ASGR2P07307 311 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 PMLP29590 882 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 RFC2P35250 354 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 PHKA1P46020 1223 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 RBM25P49756 843 aaKnown RBP5.26□□□□□ -1.57
LMNB1-205ENST00000472034 CLCN5P51795 746 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 SNRPNP63162 240 aaKnown RBP5.26□□□□□ -1.57
LMNB1-205ENST00000472034 COG2Q14746 738 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 RAB3GAP1Q15042 981 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 PRRT3Q5FWE3 981 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 PERM1Q5SV97 790 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 UTP14CQ5TAP6 766 aaKnown RBP5.26□□□□□ -1.57
LMNB1-205ENST00000472034 TMCO4Q5TGY1 634 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 DZIP1Q86YF9 867 aaKnown RBP5.26□□□□□ -1.57
LMNB1-205ENST00000472034 TMEM192Q8IY95 271 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 CCDC146Q8IYE0 955 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 KAZALD1Q96I82 304 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 FGD4Q96M96 766 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 FAM129BQ96TA1 746 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 TANGO6Q9C0B7 1094 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 KATNBL1Q9H079 304 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 KIAA1683Q9H0B3 1180 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 MFSD1Q9H3U5 465 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 SPC25Q9HBM1 224 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 PARD6AQ9NPB6 346 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 CNTN3Q9P232 1028 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 ABCF2Q9UG63 623 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 FEZ2Q9UHY8 353 aaPredicted RBP5.26□□□□□ -1.57
LMNB1-205ENST00000472034 AKAP13Q12802 2813 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 FANCMQ8IYD8 2048 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 ZNF462Q96JM2 2506 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 NLRC5Q86WI3 1866 aa5.26□□□□□ -1.57
LMNB1-205ENST00000472034 SALL1Q9NSC2 1324 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 A0A1W2PRG0 241 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 SRRM3A6NNA2 597 aaPredicted RBP5.25□□□□□ -1.57
LMNB1-205ENST00000472034 NBNO60934 754 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 KIF4AO95239 1232 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 TGM1P22735 817 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 RAC1P63000 192 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 NKX3-2P78367 333 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 PLCB3Q01970 1234 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 MECOMQ03112 1051 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 COASYQ13057 564 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 OS9Q13438 667 aaPredicted RBP5.25□□□□□ -1.57
LMNB1-205ENST00000472034 CAMK1Q14012 370 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 MYBPC2Q14324 1141 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 FSCN1Q16658 493 aaKnown RBP5.25□□□□□ -1.57
LMNB1-205ENST00000472034 SPTY2D1Q68D10 685 aaPredicted RBP5.25□□□□□ -1.57
LMNB1-205ENST00000472034 C20orf204Q6ZNR8 217 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 PRR23BQ6ZRT6 265 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 NOL8Q76FK4 1167 aaKnown RBP5.25□□□□□ -1.57
LMNB1-205ENST00000472034 TLK2Q86UE8 772 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 FBXO11Q86XK2 927 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 WFDC8Q8IUA0 241 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 MAPKAPK5Q8IW41 473 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 TEX11Q8IYF3 940 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 OTUD6BQ8N6M0 293 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 LINS1Q8NG48 757 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 SH3RF3Q8TEJ3 882 aaPredicted RBP5.25□□□□□ -1.57
LMNB1-205ENST00000472034 LPIN3Q9BQK8 851 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 RTKNQ9BST9 563 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 NIF3L1Q9GZT8 377 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 GZF1Q9H116 711 aaPredicted RBP5.25□□□□□ -1.57
LMNB1-205ENST00000472034 MUC3BQ9H195 1237 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 DNAJC25Q9H1X3 360 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 SEMA4AQ9H3S1 761 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 MYH16Q9H6N6 1097 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 KANSL3Q9P2N6 904 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 PI4KBQ9UBF8 816 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 SAP30BPQ9UHR5 308 aaKnown RBP5.25□□□□□ -1.57
LMNB1-205ENST00000472034 FOXD3Q9UJU5 478 aaPredicted RBP5.25□□□□□ -1.57
LMNB1-205ENST00000472034 PALD1Q9ULE6 856 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 HDAC5Q9UQL6 1122 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 DIS3Q9Y2L1 958 aaKnown RBP5.25□□□□□ -1.57
LMNB1-205ENST00000472034 STARD13Q9Y3M8 1113 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 SUPT16HQ9Y5B9 1047 aaKnown RBP5.25□□□□□ -1.57
LMNB1-205ENST00000472034 FREM2Q5SZK8 3169 aa5.25□□□□□ -1.57
LMNB1-205ENST00000472034 MICAL3Q7RTP6 2002 aa5.24□□□□□ -1.57
LMNB1-205ENST00000472034 F6X3S4 739 aa5.24□□□□□ -1.57
LMNB1-205ENST00000472034 DYNC1LI2O43237 492 aaPredicted RBP5.24□□□□□ -1.57
LMNB1-205ENST00000472034 NCK2O43639 380 aa5.24□□□□□ -1.57
LMNB1-205ENST00000472034 CABYRO75952 493 aa5.24□□□□□ -1.57
LMNB1-205ENST00000472034 CYP2E1P05181 493 aaPredicted RBP5.24□□□□□ -1.57
LMNB1-205ENST00000472034 IFIT1P09914 478 aaKnown RBP5.24□□□□□ -1.57
LMNB1-205ENST00000472034 AOC1P19801 751 aa5.24□□□□□ -1.57
LMNB1-205ENST00000472034 DNAJB1P25685 340 aa5.24□□□□□ -1.57
LMNB1-205ENST00000472034 GUCY1A2P33402 732 aa5.24□□□□□ -1.57
LMNB1-205ENST00000472034 USP14P54578 494 aa5.24□□□□□ -1.57
LMNB1-205ENST00000472034 MFAP1P55081 439 aaKnown RBP5.24□□□□□ -1.57
LMNB1-205ENST00000472034 HTRA4P83105 476 aaPredicted RBP5.24□□□□□ -1.57
LMNB1-205ENST00000472034 LMOD3Q0VAK6 560 aa5.24□□□□□ -1.57
LMNB1-205ENST00000472034 KCNMA1Q12791 1236 aa5.24□□□□□ -1.57
LMNB1-205ENST00000472034 PUM3Q15397 648 aaKnown RBP5.24□□□□□ -1.57
LMNB1-205ENST00000472034 FAM47CQ5HY64 1035 aa5.24□□□□□ -1.57
LMNB1-205ENST00000472034 N4BP2L1Q5TBK1 243 aaPredicted RBP5.24□□□□□ -1.57
LMNB1-205ENST00000472034 CCDC30Q5VVM6 783 aa5.24□□□□□ -1.57
LMNB1-205ENST00000472034 CEP135Q66GS9 1140 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms