RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 LETM2Q2VYF4 491 aa12.99□□□□□ -0.33
COL4A3-205ENST00000471862 EARS2Q5JPH6 523 aaKnown RBP12.99□□□□□ -0.33
COL4A3-205ENST00000471862 TRMT1LQ7Z2T5 733 aaKnown RBP12.99□□□□□ -0.33
COL4A3-205ENST00000471862 MIER3Q7Z3K6 550 aa12.99□□□□□ -0.33
COL4A3-205ENST00000471862 NEK8Q86SG6 692 aa12.99□□□□□ -0.33
COL4A3-205ENST00000471862 FAM228AQ86W67 206 aa12.99□□□□□ -0.33
COL4A3-205ENST00000471862 WASF1Q92558 559 aa12.99□□□□□ -0.33
COL4A3-205ENST00000471862 TNFRSF25Q93038 417 aa12.99□□□□□ -0.33
COL4A3-205ENST00000471862 OSMRQ99650 979 aa12.99□□□□□ -0.33
COL4A3-205ENST00000471862 NRBP2Q9NSY0 501 aa12.99□□□□□ -0.33
COL4A3-205ENST00000471862 VAV3Q9UKW4 847 aa12.99□□□□□ -0.33
COL4A3-205ENST00000471862 GINS2Q9Y248 185 aa12.99□□□□□ -0.33
COL4A3-205ENST00000471862 RB1P06400 928 aa12.98□□□□□ -0.33
COL4A3-205ENST00000471862 BMPR1AP36894 532 aa12.98□□□□□ -0.33
COL4A3-205ENST00000471862 SARSP49591 514 aaKnown RBP12.98□□□□□ -0.33
COL4A3-205ENST00000471862 NEK4P51957 841 aa12.98□□□□□ -0.33
COL4A3-205ENST00000471862 NFX1Q12986 1120 aaKnown RBP12.98□□□□□ -0.33
COL4A3-205ENST00000471862 PPP2R5CQ13362 524 aa12.98□□□□□ -0.33
COL4A3-205ENST00000471862 DSC3Q14574 896 aa12.98□□□□□ -0.33
COL4A3-205ENST00000471862 AAK1Q2M2I8 961 aa12.98□□□□□ -0.33
COL4A3-205ENST00000471862 ODR4Q5SWX8 454 aa12.98□□□□□ -0.33
COL4A3-205ENST00000471862 EFCAB12Q6NXP0 572 aa12.98□□□□□ -0.33
COL4A3-205ENST00000471862 CMTR2Q8IYT2 770 aaKnown RBP12.98□□□□□ -0.33
COL4A3-205ENST00000471862 LRRC71Q8N4P6 559 aa12.98□□□□□ -0.33
COL4A3-205ENST00000471862 METTL13Q8N6R0 699 aa12.98□□□□□ -0.33
COL4A3-205ENST00000471862 ADAMTS19Q8TE59 1207 aa12.98□□□□□ -0.33
COL4A3-205ENST00000471862 HLA-CQ95604 372 aa12.98□□□□□ -0.33
COL4A3-205ENST00000471862 FAM20AQ96MK3 541 aa12.98□□□□□ -0.33
COL4A3-205ENST00000471862 PPP1R16BQ96T49 567 aa12.98□□□□□ -0.33
COL4A3-205ENST00000471862 NIFKQ9BYG3 293 aaKnown RBP12.98□□□□□ -0.33
COL4A3-205ENST00000471862 ADAMTS10Q9H324 1103 aa12.98□□□□□ -0.33
COL4A3-205ENST00000471862 RGS18Q9NS28 235 aa12.98□□□□□ -0.33
COL4A3-205ENST00000471862 ST3GAL5Q9UNP4 418 aa12.98□□□□□ -0.33
COL4A3-205ENST00000471862 RWDD3Q9Y3V2 267 aa12.98□□□□□ -0.33
COL4A3-205ENST00000471862 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.97□□□□□ -0.33
COL4A3-205ENST00000471862 IGKV6-21A0A0C4DH24 114 aa12.97□□□□□ -0.33
COL4A3-205ENST00000471862 FAM205CA6NFA0 338 aa12.97□□□□□ -0.33
COL4A3-205ENST00000471862 C9IYK1 514 aa12.97□□□□□ -0.33
COL4A3-205ENST00000471862 EML1O00423 815 aa12.97□□□□□ -0.33
COL4A3-205ENST00000471862 TBX3O15119 743 aa12.97□□□□□ -0.33
COL4A3-205ENST00000471862 GPR182O15218 404 aa12.97□□□□□ -0.33
COL4A3-205ENST00000471862 STAG3L1P0CL83 205 aa12.97□□□□□ -0.33
COL4A3-205ENST00000471862 TMOD1P28289 359 aa12.97□□□□□ -0.33
COL4A3-205ENST00000471862 CTNNB1P35222 781 aa12.97□□□□□ -0.33
COL4A3-205ENST00000471862 KCNQ1P51787 676 aa12.97□□□□□ -0.33
COL4A3-205ENST00000471862 NR5A1Q13285 461 aa12.97□□□□□ -0.33
COL4A3-205ENST00000471862 BTG3Q14201 252 aaPredicted RBP12.97□□□□□ -0.33
COL4A3-205ENST00000471862 PTPROQ16827 1216 aa12.97□□□□□ -0.33
COL4A3-205ENST00000471862 XKR3Q5GH77 459 aa12.97□□□□□ -0.33
COL4A3-205ENST00000471862 PIK3AP1Q6ZUJ8 805 aa12.97□□□□□ -0.33
COL4A3-205ENST00000471862 ZNF710Q8N1W2 664 aa12.97□□□□□ -0.33
COL4A3-205ENST00000471862 HAS1Q92839 578 aa12.97□□□□□ -0.33
COL4A3-205ENST00000471862 C1orf112Q9NSG2 853 aa12.97□□□□□ -0.33
COL4A3-205ENST00000471862 MRPL42Q9Y6G3 142 aaKnown RBP12.97□□□□□ -0.33
COL4A3-205ENST00000471862 TMEM150BA6NC51 233 aa12.96□□□□□ -0.33
COL4A3-205ENST00000471862 JAK2O60674 1132 aa12.96□□□□□ -0.33
COL4A3-205ENST00000471862 KRT2P35908 639 aa12.96□□□□□ -0.33
COL4A3-205ENST00000471862 GATMP50440 423 aa12.96□□□□□ -0.33
COL4A3-205ENST00000471862 GPC3P51654 580 aa12.96□□□□□ -0.33
COL4A3-205ENST00000471862 NLRP11P59045 1033 aaKnown RBP12.96□□□□□ -0.33
COL4A3-205ENST00000471862 FAM189BP81408 668 aa12.96□□□□□ -0.33
COL4A3-205ENST00000471862 TBC1D8BQ0IIM8 1120 aa12.96□□□□□ -0.33
COL4A3-205ENST00000471862 DRP2Q13474 957 aa12.96□□□□□ -0.33
COL4A3-205ENST00000471862 COL19A1Q14993 1142 aa12.96□□□□□ -0.33
COL4A3-205ENST00000471862 TIGD5Q53EQ6 642 aa12.96□□□□□ -0.33
COL4A3-205ENST00000471862 POTEDQ86YR6 584 aa12.96□□□□□ -0.33
COL4A3-205ENST00000471862 MAP7D2Q96T17 732 aa12.96□□□□□ -0.33
COL4A3-205ENST00000471862 UHRF1Q96T88 793 aaPredicted RBP12.96□□□□□ -0.33
COL4A3-205ENST00000471862 NAP1L4Q99733 375 aaKnown RBP12.96□□□□□ -0.33
COL4A3-205ENST00000471862 ADAM2Q99965 735 aa12.96□□□□□ -0.33
COL4A3-205ENST00000471862 C11orf84Q9BUA3 381 aaPredicted RBP12.96□□□□□ -0.33
COL4A3-205ENST00000471862 LMAN2LQ9H0V9 348 aa12.96□□□□□ -0.33
COL4A3-205ENST00000471862 UBE2ZQ9H832 354 aaPredicted RBP12.96□□□□□ -0.33
COL4A3-205ENST00000471862 SEPT9Q9UHD8 586 aaPredicted RBP12.96□□□□□ -0.33
COL4A3-205ENST00000471862 AKT3Q9Y243 479 aa12.96□□□□□ -0.33
COL4A3-205ENST00000471862 PLXNA4Q9HCM2 1894 aa12.95□□□□□ -0.34
COL4A3-205ENST00000471862 ARID2Q68CP9 1835 aa12.95□□□□□ -0.34
COL4A3-205ENST00000471862 TNFRSF10AO00220 468 aa12.95□□□□□ -0.34
COL4A3-205ENST00000471862 GRM6O15303 877 aa12.95□□□□□ -0.34
COL4A3-205ENST00000471862 CCNT1O60563 726 aaKnown RBP12.95□□□□□ -0.34
COL4A3-205ENST00000471862 MMP1P03956 469 aa12.95□□□□□ -0.34
COL4A3-205ENST00000471862 DARSP14868 501 aaKnown RBP12.95□□□□□ -0.34
COL4A3-205ENST00000471862 EIF4BP23588 611 aaKnown RBP12.95□□□□□ -0.34
COL4A3-205ENST00000471862 PSMC5P62195 406 aa12.95□□□□□ -0.34
COL4A3-205ENST00000471862 SPIRE1Q08AE8 756 aa12.95□□□□□ -0.34
COL4A3-205ENST00000471862 C8orf34Q49A92 452 aa12.95□□□□□ -0.34
COL4A3-205ENST00000471862 MTERF2Q49AM1 385 aa12.95□□□□□ -0.34
COL4A3-205ENST00000471862 SLC24A5Q71RS6 500 aa12.95□□□□□ -0.34
COL4A3-205ENST00000471862 ANO5Q75V66 913 aa12.95□□□□□ -0.34
COL4A3-205ENST00000471862 BANK1Q8NDB2 785 aa12.95□□□□□ -0.34
COL4A3-205ENST00000471862 P2RX5Q93086 422 aa12.95□□□□□ -0.34
COL4A3-205ENST00000471862 KIF2CQ99661 725 aa12.95□□□□□ -0.34
COL4A3-205ENST00000471862 PLVAPQ9BX97 442 aa12.95□□□□□ -0.34
COL4A3-205ENST00000471862 ELAC1Q9H777 363 aaKnown RBP12.95□□□□□ -0.34
COL4A3-205ENST00000471862 WRAP73Q9P2S5 460 aaPredicted RBP12.95□□□□□ -0.34
COL4A3-205ENST00000471862 DENND3A2RUS2 1198 aa12.94□□□□□ -0.34
COL4A3-205ENST00000471862 WNT7AO00755 349 aa12.94□□□□□ -0.34
COL4A3-205ENST00000471862 QARSP47897 775 aaKnown RBP12.94□□□□□ -0.34
COL4A3-205ENST00000471862 CAMK1Q14012 370 aa12.94□□□□□ -0.34
COL4A3-205ENST00000471862 EPHA7Q15375 998 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms