RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 RTN4RL1Q86UN2 441 aaPredicted RBP10.67□□□□□ -0.7
GGPS1-204ENST00000471812 TEX2Q8IWB9 1127 aa10.67□□□□□ -0.7
GGPS1-204ENST00000471812 ATP8B4Q8TF62 1192 aa10.67□□□□□ -0.7
GGPS1-204ENST00000471812 CEP89Q96ST8 783 aa10.67□□□□□ -0.7
GGPS1-204ENST00000471812 AZI2Q9H6S1 392 aa10.67□□□□□ -0.7
GGPS1-204ENST00000471812 DISC1Q9NRI5 854 aa10.67□□□□□ -0.7
GGPS1-204ENST00000471812 VAV3Q9UKW4 847 aa10.67□□□□□ -0.7
GGPS1-204ENST00000471812 PCDHA11Q9Y5I1 949 aa10.67□□□□□ -0.7
GGPS1-204ENST00000471812 MAFBQ9Y5Q3 323 aaPredicted RBP10.67□□□□□ -0.7
GGPS1-204ENST00000471812 FNDC1Q4ZHG4 1894 aaPredicted RBP10.66□□□□□ -0.7
GGPS1-204ENST00000471812 A0A087WWV3 80 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 ZBTB39O15060 712 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 MGEA5O60502 916 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 GAS7O60861 476 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 CDKL5O76039 1030 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 VTNP04004 478 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 ACTN1P12814 892 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 FOSL2P15408 326 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 GATMP50440 423 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 MRPS6P82932 125 aaKnown RBP10.66□□□□□ -0.7
GGPS1-204ENST00000471812 PRKCEQ02156 737 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 PPP2R2DQ66LE6 453 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 PLA2G4FQ68DD2 849 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 MIS18BP1Q6P0N0 1132 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 KRT25Q7Z3Z0 450 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 DIS3L2Q8IYB7 885 aaKnown RBP10.66□□□□□ -0.7
GGPS1-204ENST00000471812 KIAA0319LQ8IZA0 1049 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 MYOCDQ8IZQ8 938 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 LRRC71Q8N4P6 559 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 LINC01465Q8N7H1 131 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 BANK1Q8NDB2 785 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 PPM1EQ8WY54 764 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 SLC9A7Q96T83 725 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 TMEM60Q9H2L4 133 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 TMX1Q9H3N1 280 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 KCNMB3Q9NPA1 279 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 TBC1D22BQ9NU19 505 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 DDX25Q9UHL0 483 aaKnown RBP10.66□□□□□ -0.7
GGPS1-204ENST00000471812 MSRAQ9UJ68 235 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 MTUS1Q9ULD2 1270 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 LIMCH1Q9UPQ0 1083 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 PCDHA10Q9Y5I2 948 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 TTC28Q96AY4 2481 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 VCANP13611 3396 aa10.66□□□□□ -0.7
GGPS1-204ENST00000471812 TCF20Q9UGU0 1960 aaKnown RBP10.65□□□□□ -0.7
GGPS1-204ENST00000471812 CCDC194A0A1B0GVG4 234 aa10.65□□□□□ -0.7
GGPS1-204ENST00000471812 HBP1O60381 514 aa10.65□□□□□ -0.7
GGPS1-204ENST00000471812 LPXNO60711 386 aa10.65□□□□□ -0.7
GGPS1-204ENST00000471812 BAIAP3O94812 1187 aa10.65□□□□□ -0.7
GGPS1-204ENST00000471812 UPP2O95045 317 aa10.65□□□□□ -0.7
GGPS1-204ENST00000471812 GJB5O95377 273 aa10.65□□□□□ -0.7
GGPS1-204ENST00000471812 MMP1P03956 469 aa10.65□□□□□ -0.7
GGPS1-204ENST00000471812 GNAT1P11488 350 aa10.65□□□□□ -0.7
GGPS1-204ENST00000471812 IBSPP21815 317 aaPredicted RBP10.65□□□□□ -0.7
GGPS1-204ENST00000471812 KRT2P35908 639 aa10.65□□□□□ -0.7
GGPS1-204ENST00000471812 KRT76Q01546 638 aa10.65□□□□□ -0.7
GGPS1-204ENST00000471812 SPIRE1Q08AE8 756 aa10.65□□□□□ -0.7
GGPS1-204ENST00000471812 RAB30Q15771 203 aa10.65□□□□□ -0.7
GGPS1-204ENST00000471812 CCDC85BQ15834 202 aaPredicted RBP10.65□□□□□ -0.7
GGPS1-204ENST00000471812 C6orf132Q5T0Z8 1188 aa10.65□□□□□ -0.7
GGPS1-204ENST00000471812 MIER3Q7Z3K6 550 aa10.65□□□□□ -0.7
GGPS1-204ENST00000471812 NEK8Q86SG6 692 aa10.65□□□□□ -0.7
GGPS1-204ENST00000471812 RPAINQ86UA6 219 aa10.65□□□□□ -0.7
GGPS1-204ENST00000471812 CKAP2LQ8IYA6 745 aa10.65□□□□□ -0.7
GGPS1-204ENST00000471812 MAFAQ8NHW3 353 aaPredicted RBP10.65□□□□□ -0.7
GGPS1-204ENST00000471812 GDPD5Q8WTR4 605 aa10.65□□□□□ -0.7
GGPS1-204ENST00000471812 TMUB1Q9BVT8 246 aa10.65□□□□□ -0.7
GGPS1-204ENST00000471812 TEKT3Q9BXF9 490 aa10.65□□□□□ -0.7
GGPS1-204ENST00000471812 IFIH1Q9BYX4 1025 aaKnown RBP10.65□□□□□ -0.7
GGPS1-204ENST00000471812 RGL1Q9NZL6 768 aa10.65□□□□□ -0.7
GGPS1-204ENST00000471812 GINS2Q9Y248 185 aa10.65□□□□□ -0.7
GGPS1-204ENST00000471812 SAMM50Q9Y512 469 aa10.65□□□□□ -0.7
GGPS1-204ENST00000471812 PCDHA2Q9Y5H9 948 aa10.65□□□□□ -0.7
GGPS1-204ENST00000471812 TMEM265A0A087WTH1 108 aa10.64□□□□□ -0.71
GGPS1-204ENST00000471812 SMIM35A0A1B0GVV1 85 aa10.64□□□□□ -0.71
GGPS1-204ENST00000471812 ABHD14A-ACY1A0A1B0GW23 586 aa10.64□□□□□ -0.71
GGPS1-204ENST00000471812 LINC01553A4QN01 128 aa10.64□□□□□ -0.71
GGPS1-204ENST00000471812 RRN3P2A6NIE6 340 aa10.64□□□□□ -0.71
GGPS1-204ENST00000471812 WDR64B1ANS9 1081 aa10.64□□□□□ -0.71
GGPS1-204ENST00000471812 TLL1O43897 1013 aa10.64□□□□□ -0.71
GGPS1-204ENST00000471812 CCNT1O60563 726 aaKnown RBP10.64□□□□□ -0.71
GGPS1-204ENST00000471812 CSDE1O75534 798 aaKnown RBP10.64□□□□□ -0.71
GGPS1-204ENST00000471812 PSAPP07602 524 aa10.64□□□□□ -0.71
GGPS1-204ENST00000471812 LINC00271P0C7V0 271 aa10.64□□□□□ -0.71
GGPS1-204ENST00000471812 ATP2B1P20020 1258 aa10.64□□□□□ -0.71
GGPS1-204ENST00000471812 FGFR4P22455 802 aa10.64□□□□□ -0.71
GGPS1-204ENST00000471812 KCNJ6P48051 423 aa10.64□□□□□ -0.71
GGPS1-204ENST00000471812 IKBKEQ14164 716 aa10.64□□□□□ -0.71
GGPS1-204ENST00000471812 KIZQ2M2Z5 673 aa10.64□□□□□ -0.71
GGPS1-204ENST00000471812 FAM160B1Q5W0V3 765 aa10.64□□□□□ -0.71
GGPS1-204ENST00000471812 MCTP2Q6DN12 878 aa10.64□□□□□ -0.71
GGPS1-204ENST00000471812 GALNT17Q6IS24 598 aa10.64□□□□□ -0.71
GGPS1-204ENST00000471812 TAF2Q6P1X5 1199 aa10.64□□□□□ -0.71
GGPS1-204ENST00000471812 ZNF454Q8N9F8 522 aa10.64□□□□□ -0.71
GGPS1-204ENST00000471812 ARNTL2Q8WYA1 636 aa10.64□□□□□ -0.71
GGPS1-204ENST00000471812 SEPT8Q92599 483 aa10.64□□□□□ -0.71
GGPS1-204ENST00000471812 RIT2Q99578 217 aa10.64□□□□□ -0.71
GGPS1-204ENST00000471812 OSMRQ99650 979 aa10.64□□□□□ -0.71
GGPS1-204ENST00000471812 C17orf80Q9BSJ5 609 aa10.64□□□□□ -0.71
GGPS1-204ENST00000471812 ADAM33Q9BZ11 813 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms