RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 PSMD10O75832 226 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 PBX3P40426 434 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 NLRP11P59045 1033 aaKnown RBP9.15□□□□□ -0.94
USP48-207ENST00000471752 NLRP5P59047 1200 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 ERVFC1P60507 584 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 FAM189BP81408 668 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 SCRN1Q12765 414 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 PAK2Q13177 524 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 CTC1Q2NKJ3 1217 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 LONRF3Q496Y0 759 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 ZNF484Q5JVG2 852 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 ZNF746Q6NUN9 644 aaPredicted RBP9.15□□□□□ -0.94
USP48-207ENST00000471752 EFCAB12Q6NXP0 572 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 MIS18BP1Q6P0N0 1132 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 B3GNT9Q6UX72 402 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 RBM23Q86U06 439 aaKnown RBP9.15□□□□□ -0.94
USP48-207ENST00000471752 CKAP2LQ8IYA6 745 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 NECAB1Q8N987 351 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 IL27Q8NEV9 243 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 VN1R2Q8NFZ6 395 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 LRFN3Q9BTN0 628 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 RNF26Q9BY78 433 aaPredicted RBP9.15□□□□□ -0.94
USP48-207ENST00000471752 DISC1Q9NRI5 854 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 TBC1D22BQ9NU19 505 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 TYW1Q9NV66 732 aaKnown RBP9.15□□□□□ -0.94
USP48-207ENST00000471752 CLDND1Q9NY35 253 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 WRAP73Q9P2S5 460 aaPredicted RBP9.15□□□□□ -0.94
USP48-207ENST00000471752 PCDHA10Q9Y5I2 948 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 CYP46A1Q9Y6A2 500 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 KAT6AQ92794 2004 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 MUC6Q6W4X9 2439 aa9.15□□□□□ -0.94
USP48-207ENST00000471752 CCDC196A0A1B0GTZ2 297 aa9.14□□□□□ -0.95
USP48-207ENST00000471752 TBKBP1A7MCY6 615 aa9.14□□□□□ -0.95
USP48-207ENST00000471752 MEIS3P2A8K0S8 358 aa9.14□□□□□ -0.95
USP48-207ENST00000471752 TBX10O75333 385 aa9.14□□□□□ -0.95
USP48-207ENST00000471752 FDPSP14324 419 aaKnown RBP9.14□□□□□ -0.95
USP48-207ENST00000471752 PSMA5P28066 241 aa9.14□□□□□ -0.95
USP48-207ENST00000471752 SSRP1Q08945 709 aaKnown RBP9.14□□□□□ -0.95
USP48-207ENST00000471752 ADAM15Q13444 863 aa9.14□□□□□ -0.95
USP48-207ENST00000471752 TARBP2Q15633 366 aaKnown RBP9.14□□□□□ -0.95
USP48-207ENST00000471752 INF2Q27J81 1249 aa9.14□□□□□ -0.95
USP48-207ENST00000471752 AAK1Q2M2I8 961 aa9.14□□□□□ -0.95
USP48-207ENST00000471752 FAM160B1Q5W0V3 765 aa9.14□□□□□ -0.95
USP48-207ENST00000471752 KSR1Q8IVT5 923 aa9.14□□□□□ -0.95
USP48-207ENST00000471752 GJD3Q8N144 294 aa9.14□□□□□ -0.95
USP48-207ENST00000471752 NME8Q8N427 588 aa9.14□□□□□ -0.95
USP48-207ENST00000471752 PABPC5Q96DU9 382 aaKnown RBP9.14□□□□□ -0.95
USP48-207ENST00000471752 GLT8D2Q9H1C3 349 aa9.14□□□□□ -0.95
USP48-207ENST00000471752 NSUN3Q9H649 340 aaKnown RBP9.14□□□□□ -0.95
USP48-207ENST00000471752 CWH43Q9H720 699 aa9.14□□□□□ -0.95
USP48-207ENST00000471752 RGS18Q9NS28 235 aa9.14□□□□□ -0.95
USP48-207ENST00000471752 PDRG1Q9NUG6 133 aa9.14□□□□□ -0.95
USP48-207ENST00000471752 CLEC1BQ9P126 229 aa9.14□□□□□ -0.95
USP48-207ENST00000471752 CDH22Q9UJ99 828 aa9.14□□□□□ -0.95
USP48-207ENST00000471752 PCDHA4Q9UN74 947 aa9.14□□□□□ -0.95
USP48-207ENST00000471752 SAMM50Q9Y512 469 aa9.14□□□□□ -0.95
USP48-207ENST00000471752 CYP3A7-CYP3A51PA0A087WV96 503 aa9.13□□□□□ -0.95
USP48-207ENST00000471752 REC8O95072 547 aa9.13□□□□□ -0.95
USP48-207ENST00000471752 GLP2RO95838 553 aa9.13□□□□□ -0.95
USP48-207ENST00000471752 OATP04181 439 aa9.13□□□□□ -0.95
USP48-207ENST00000471752 RB1P06400 928 aa9.13□□□□□ -0.95
USP48-207ENST00000471752 PSAPP07602 524 aa9.13□□□□□ -0.95
USP48-207ENST00000471752 CYP3A7P24462 503 aa9.13□□□□□ -0.95
USP48-207ENST00000471752 GNA11P29992 359 aa9.13□□□□□ -0.95
USP48-207ENST00000471752 SARSP49591 514 aaKnown RBP9.13□□□□□ -0.95
USP48-207ENST00000471752 USP11P51784 963 aa9.13□□□□□ -0.95
USP48-207ENST00000471752 FOSBP53539 338 aa9.13□□□□□ -0.95
USP48-207ENST00000471752 CRYBB1P53674 252 aaPredicted RBP9.13□□□□□ -0.95
USP48-207ENST00000471752 NPEPPSP55786 919 aa9.13□□□□□ -0.95
USP48-207ENST00000471752 AKAP17AQ02040 695 aaKnown RBP9.13□□□□□ -0.95
USP48-207ENST00000471752 PRKCEQ02156 737 aa9.13□□□□□ -0.95
USP48-207ENST00000471752 ST3GAL1Q11201 340 aa9.13□□□□□ -0.95
USP48-207ENST00000471752 Q4G0T1 1027 aa9.13□□□□□ -0.95
USP48-207ENST00000471752 LRCH2Q5VUJ6 765 aa9.13□□□□□ -0.95
USP48-207ENST00000471752 PLA2G4FQ68DD2 849 aa9.13□□□□□ -0.95
USP48-207ENST00000471752 NPAS4Q8IUM7 802 aa9.13□□□□□ -0.95
USP48-207ENST00000471752 BLIDQ8IZY5 108 aa9.13□□□□□ -0.95
USP48-207ENST00000471752 ETNPPLQ8TBG4 499 aa9.13□□□□□ -0.95
USP48-207ENST00000471752 POF1BQ8WVV4 589 aa9.13□□□□□ -0.95
USP48-207ENST00000471752 BBXQ8WY36 941 aaPredicted RBP9.13□□□□□ -0.95
USP48-207ENST00000471752 HAS1Q92839 578 aa9.13□□□□□ -0.95
USP48-207ENST00000471752 ZNF274Q96GC6 653 aaPredicted RBP9.13□□□□□ -0.95
USP48-207ENST00000471752 MBOAT7Q96N66 472 aa9.13□□□□□ -0.95
USP48-207ENST00000471752 SAMD11Q96NU1 681 aa9.13□□□□□ -0.95
USP48-207ENST00000471752 CASD1Q96PB1 797 aa9.13□□□□□ -0.95
USP48-207ENST00000471752 TM6SF1Q9BZW5 370 aa9.13□□□□□ -0.95
USP48-207ENST00000471752 SQORQ9Y6N5 450 aa9.13□□□□□ -0.95
USP48-207ENST00000471752 DMDP11532 3685 aa9.12□□□□□ -0.95
USP48-207ENST00000471752 EVPLQ92817 2033 aa9.12□□□□□ -0.95
USP48-207ENST00000471752 LOXHD1Q8IVV2 1947 aa9.12□□□□□ -0.95
USP48-207ENST00000471752 DENND3A2RUS2 1198 aa9.12□□□□□ -0.95
USP48-207ENST00000471752 DDX11L8A8MPP1 907 aa9.12□□□□□ -0.95
USP48-207ENST00000471752 HIDE1A8MVS5 230 aa9.12□□□□□ -0.95
USP48-207ENST00000471752 PI4K2BG5E9Z4 385 aa9.12□□□□□ -0.95
USP48-207ENST00000471752 B4GALT3O60512 393 aa9.12□□□□□ -0.95
USP48-207ENST00000471752 JAK2O60674 1132 aa9.12□□□□□ -0.95
USP48-207ENST00000471752 PFKFB2O60825 505 aa9.12□□□□□ -0.95
USP48-207ENST00000471752 GAS7O60861 476 aa9.12□□□□□ -0.95
USP48-207ENST00000471752 ATF7P17544 494 aaPredicted RBP9.12□□□□□ -0.95
USP48-207ENST00000471752 NRIP1P48552 1158 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms