RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 USP28Q96RU2 1077 aa19.8■□□□□ 0.76
VPS72-204ENST00000471423 MAP7D2Q96T17 732 aa19.8■□□□□ 0.76
VPS72-204ENST00000471423 CXXC1Q9P0U4 656 aaPredicted RBP19.8■□□□□ 0.76
VPS72-204ENST00000471423 GINS2Q9Y248 185 aa19.8■□□□□ 0.76
VPS72-204ENST00000471423 IGKV6-21A0A0C4DH24 114 aa19.79■□□□□ 0.76
VPS72-204ENST00000471423 ZBBXA8MT70 800 aa19.79■□□□□ 0.76
VPS72-204ENST00000471423 MKRN4PQ13434 485 aaPredicted RBP19.79■□□□□ 0.76
VPS72-204ENST00000471423 DRP2Q13474 957 aa19.79■□□□□ 0.76
VPS72-204ENST00000471423 LPIN1Q14693 890 aa19.79■□□□□ 0.76
VPS72-204ENST00000471423 ECM1Q16610 540 aa19.79■□□□□ 0.76
VPS72-204ENST00000471423 FBXO47Q5MNV8 452 aa19.79■□□□□ 0.76
VPS72-204ENST00000471423 RASIP1Q5U651 963 aa19.79■□□□□ 0.76
VPS72-204ENST00000471423 KRT79Q5XKE5 535 aa19.79■□□□□ 0.76
VPS72-204ENST00000471423 SLC7A3Q8WY07 619 aa19.79■□□□□ 0.76
VPS72-204ENST00000471423 MMTAG2Q9BU76 263 aaKnown RBP19.79■□□□□ 0.76
VPS72-204ENST00000471423 CELF4Q9BZC1 486 aaKnown RBP19.79■□□□□ 0.76
VPS72-204ENST00000471423 MTIF3Q9H2K0 278 aaKnown RBP19.79■□□□□ 0.76
VPS72-204ENST00000471423 ANKEF1Q9NU02 776 aa19.79■□□□□ 0.76
VPS72-204ENST00000471423 PPME1Q9Y570 386 aa19.79■□□□□ 0.76
VPS72-204ENST00000471423 STK24Q9Y6E0 443 aa19.79■□□□□ 0.76
VPS72-204ENST00000471423 MUTP22033 750 aa19.78■□□□□ 0.76
VPS72-204ENST00000471423 RFC5P40937 340 aa19.78■□□□□ 0.76
VPS72-204ENST00000471423 RARRES1P49788 294 aa19.78■□□□□ 0.76
VPS72-204ENST00000471423 GRIN1Q05586 938 aa19.78■□□□□ 0.76
VPS72-204ENST00000471423 EMC2Q15006 297 aa19.78■□□□□ 0.76
VPS72-204ENST00000471423 KIZQ2M2Z5 673 aa19.78■□□□□ 0.76
VPS72-204ENST00000471423 FOXD4L6Q3SYB3 417 aaPredicted RBP19.78■□□□□ 0.76
VPS72-204ENST00000471423 PLEKHG4Q58EX7 1191 aa19.78■□□□□ 0.76
VPS72-204ENST00000471423 FOXD4L3Q6VB84 417 aaPredicted RBP19.78■□□□□ 0.76
VPS72-204ENST00000471423 DBF4BQ8NFT6 615 aa19.78■□□□□ 0.76
VPS72-204ENST00000471423 NACC1Q96RE7 527 aa19.78■□□□□ 0.76
VPS72-204ENST00000471423 JPH2Q9BR39 696 aaPredicted RBP19.78■□□□□ 0.76
VPS72-204ENST00000471423 DHX33Q9H6R0 707 aaKnown RBP19.78■□□□□ 0.76
VPS72-204ENST00000471423 CDHR5Q9HBB8 845 aa19.78■□□□□ 0.76
VPS72-204ENST00000471423 KDM3AQ9Y4C1 1321 aa19.77■□□□□ 0.76
VPS72-204ENST00000471423 GPR32O75388 356 aa19.77■□□□□ 0.76
VPS72-204ENST00000471423 MARCKSP29966 332 aaPredicted RBP19.77■□□□□ 0.76
VPS72-204ENST00000471423 LRIT3Q3SXY7 679 aa19.77■□□□□ 0.76
VPS72-204ENST00000471423 SEPT8Q92599 483 aa19.77■□□□□ 0.76
VPS72-204ENST00000471423 ZNF668Q96K58 619 aaPredicted RBP19.77■□□□□ 0.76
VPS72-204ENST00000471423 OSMRQ99650 979 aa19.77■□□□□ 0.76
VPS72-204ENST00000471423 IFIH1Q9BYX4 1025 aaKnown RBP19.77■□□□□ 0.76
VPS72-204ENST00000471423 DDX19AQ9NUU7 478 aaKnown RBP19.77■□□□□ 0.76
VPS72-204ENST00000471423 KIAA1024Q9UPX6 916 aa19.77■□□□□ 0.76
VPS72-204ENST00000471423 LAMA2P24043 3122 aaKnown RBP19.76■□□□□ 0.75
VPS72-204ENST00000471423 SOX1O00570 391 aaPredicted RBP19.76■□□□□ 0.75
VPS72-204ENST00000471423 BAIAP3O94812 1187 aa19.76■□□□□ 0.75
VPS72-204ENST00000471423 BRD1O95696 1058 aa19.76■□□□□ 0.75
VPS72-204ENST00000471423 XRCC6P12956 609 aaKnown RBP eCLIP19.76■□□□□ 0.75
VPS72-204ENST00000471423 NASPP49321 788 aaPredicted RBP19.76■□□□□ 0.75
VPS72-204ENST00000471423 DNM2P50570 870 aa19.76■□□□□ 0.75
VPS72-204ENST00000471423 NLRP11P59045 1033 aaKnown RBP19.76■□□□□ 0.75
VPS72-204ENST00000471423 ZRSR1Q15695 479 aaKnown RBP19.76■□□□□ 0.75
VPS72-204ENST00000471423 TSHZ1Q6ZSZ6 1077 aa19.76■□□□□ 0.75
VPS72-204ENST00000471423 EXOC8Q8IYI6 725 aa19.76■□□□□ 0.75
VPS72-204ENST00000471423 TMEM40Q8WWA1 233 aa19.76■□□□□ 0.75
VPS72-204ENST00000471423 AK8Q96MA6 479 aa19.76■□□□□ 0.75
VPS72-204ENST00000471423 ZNF396Q96N95 335 aaPredicted RBP19.76■□□□□ 0.75
VPS72-204ENST00000471423 XPNPEP1Q9NQW7 623 aa19.76■□□□□ 0.75
VPS72-204ENST00000471423 SUCLA2Q9P2R7 463 aaPredicted RBP19.76■□□□□ 0.75
VPS72-204ENST00000471423 DAXXQ9UER7 740 aaPredicted RBP19.76■□□□□ 0.75
VPS72-204ENST00000471423 FBXO2Q9UK22 296 aaPredicted RBP19.76■□□□□ 0.75
VPS72-204ENST00000471423 DBR1Q9UK59 544 aaKnown RBP19.76■□□□□ 0.75
VPS72-204ENST00000471423 LOXHD1Q8IVV2 1947 aa19.75■□□□□ 0.75
VPS72-204ENST00000471423 USO1O60763 962 aaKnown RBP19.75■□□□□ 0.75
VPS72-204ENST00000471423 CD52P31358 61 aa19.75■□□□□ 0.75
VPS72-204ENST00000471423 LONP1P36776 959 aaKnown RBP19.75■□□□□ 0.75
VPS72-204ENST00000471423 GPC3P51654 580 aa19.75■□□□□ 0.75
VPS72-204ENST00000471423 IKBKEQ14164 716 aa19.75■□□□□ 0.75
VPS72-204ENST00000471423 SLC39A14Q15043 492 aa19.75■□□□□ 0.75
VPS72-204ENST00000471423 FAM109BQ6ICB4 259 aaPredicted RBP19.75■□□□□ 0.75
VPS72-204ENST00000471423 TMEM143Q96AN5 459 aa19.75■□□□□ 0.75
VPS72-204ENST00000471423 SCLT1Q96NL6 688 aa19.75■□□□□ 0.75
VPS72-204ENST00000471423 MTRQ99707 1265 aa19.75■□□□□ 0.75
VPS72-204ENST00000471423 ADAMTS10Q9H324 1103 aa19.75■□□□□ 0.75
VPS72-204ENST00000471423 AGO3Q9H9G7 860 aaKnown RBP19.75■□□□□ 0.75
VPS72-204ENST00000471423 ATP6V0A4Q9HBG4 840 aa19.75■□□□□ 0.75
VPS72-204ENST00000471423 TFIP11Q9UBB9 837 aaKnown RBP19.75■□□□□ 0.75
VPS72-204ENST00000471423 ZDHHC9Q9Y397 364 aa19.75■□□□□ 0.75
VPS72-204ENST00000471423 SLC4A7Q9Y6M7 1214 aa19.75■□□□□ 0.75
VPS72-204ENST00000471423 ABHD14A-ACY1A0A1B0GW23 586 aa19.74■□□□□ 0.75
VPS72-204ENST00000471423 ARHGEF35A5YM69 484 aa19.74■□□□□ 0.75
VPS72-204ENST00000471423 GAS2O43903 313 aaKnown RBP19.74■□□□□ 0.75
VPS72-204ENST00000471423 DGAT1O75907 488 aa19.74■□□□□ 0.75
VPS72-204ENST00000471423 CRYBB1P53674 252 aaPredicted RBP19.74■□□□□ 0.75
VPS72-204ENST00000471423 WDR5P61964 334 aaKnown RBP19.74■□□□□ 0.75
VPS72-204ENST00000471423 STK38Q15208 465 aa19.74■□□□□ 0.75
VPS72-204ENST00000471423 CABP7Q86V35 215 aa19.74■□□□□ 0.75
VPS72-204ENST00000471423 RHPN2Q8IUC4 686 aa19.74■□□□□ 0.75
VPS72-204ENST00000471423 USP38Q8NB14 1042 aa19.74■□□□□ 0.75
VPS72-204ENST00000471423 NLRP7Q8WX94 980 aa19.74■□□□□ 0.75
VPS72-204ENST00000471423 APBB2Q92870 758 aa19.74■□□□□ 0.75
VPS72-204ENST00000471423 BHMT2Q9H2M3 363 aa19.74■□□□□ 0.75
VPS72-204ENST00000471423 PADI3Q9ULW8 664 aa19.74■□□□□ 0.75
VPS72-204ENST00000471423 SRPRBQ9Y5M8 271 aaKnown RBP19.74■□□□□ 0.75
VPS72-204ENST00000471423 SQORQ9Y6N5 450 aa19.74■□□□□ 0.75
VPS72-204ENST00000471423 MICAL3Q7RTP6 2002 aa19.73■□□□□ 0.75
VPS72-204ENST00000471423 E9PMD0 336 aa19.73■□□□□ 0.75
VPS72-204ENST00000471423 KCNJ6P48051 423 aa19.73■□□□□ 0.75
VPS72-204ENST00000471423 PAK2Q13177 524 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms