RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 FDPSP14324 419 aaKnown RBP17.32■□□□□ 0.36
COL1A1-203ENST00000471344 BMPR1AP36894 532 aa17.32■□□□□ 0.36
COL1A1-203ENST00000471344 JAK3P52333 1124 aa17.32■□□□□ 0.36
COL1A1-203ENST00000471344 DRP2Q13474 957 aa17.32■□□□□ 0.36
COL1A1-203ENST00000471344 LETM2Q2VYF4 491 aa17.32■□□□□ 0.36
COL1A1-203ENST00000471344 EFCAB12Q6NXP0 572 aa17.32■□□□□ 0.36
COL1A1-203ENST00000471344 MIER3Q7Z3K6 550 aa17.32■□□□□ 0.36
COL1A1-203ENST00000471344 KRT25Q7Z3Z0 450 aa17.32■□□□□ 0.36
COL1A1-203ENST00000471344 FAM167AQ96KS9 214 aa17.32■□□□□ 0.36
COL1A1-203ENST00000471344 ADAM2Q99965 735 aa17.32■□□□□ 0.36
COL1A1-203ENST00000471344 C22orf23Q9BZE7 217 aa17.32■□□□□ 0.36
COL1A1-203ENST00000471344 ORC3Q9UBD5 711 aaPredicted RBP17.32■□□□□ 0.36
COL1A1-203ENST00000471344 HCSTQ9UBK5 93 aa17.32■□□□□ 0.36
COL1A1-203ENST00000471344 DDX25Q9UHL0 483 aaKnown RBP17.32■□□□□ 0.36
COL1A1-203ENST00000471344 AKT3Q9Y243 479 aa17.32■□□□□ 0.36
COL1A1-203ENST00000471344 FNDC1Q4ZHG4 1894 aaPredicted RBP17.31■□□□□ 0.36
COL1A1-203ENST00000471344 C5orf67F2Z3F1 127 aa17.31■□□□□ 0.36
COL1A1-203ENST00000471344 EML1O00423 815 aa17.31■□□□□ 0.36
COL1A1-203ENST00000471344 STBD1O95210 358 aa17.31■□□□□ 0.36
COL1A1-203ENST00000471344 SFNP31947 248 aa17.31■□□□□ 0.36
COL1A1-203ENST00000471344 FOSBP53539 338 aa17.31■□□□□ 0.36
COL1A1-203ENST00000471344 CRYBB1P53674 252 aaPredicted RBP17.31■□□□□ 0.36
COL1A1-203ENST00000471344 NLRP11P59045 1033 aaKnown RBP17.31■□□□□ 0.36
COL1A1-203ENST00000471344 ST3GAL1Q11201 340 aa17.31■□□□□ 0.36
COL1A1-203ENST00000471344 AAK1Q2M2I8 961 aa17.31■□□□□ 0.36
COL1A1-203ENST00000471344 TCEAL5Q5H9L2 206 aa17.31■□□□□ 0.36
COL1A1-203ENST00000471344 GALNT17Q6IS24 598 aa17.31■□□□□ 0.36
COL1A1-203ENST00000471344 PIK3AP1Q6ZUJ8 805 aa17.31■□□□□ 0.36
COL1A1-203ENST00000471344 BANK1Q8NDB2 785 aa17.31■□□□□ 0.36
COL1A1-203ENST00000471344 GTF3C6Q969F1 213 aa17.31■□□□□ 0.36
COL1A1-203ENST00000471344 ADAMTS10Q9H324 1103 aa17.31■□□□□ 0.36
COL1A1-203ENST00000471344 SEPT9Q9UHD8 586 aaPredicted RBP17.31■□□□□ 0.36
COL1A1-203ENST00000471344 NCOR1O75376 2440 aa17.3■□□□□ 0.36
COL1A1-203ENST00000471344 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.3■□□□□ 0.36
COL1A1-203ENST00000471344 CCDC194A0A1B0GVG4 234 aa17.3■□□□□ 0.36
COL1A1-203ENST00000471344 JAK2O60674 1132 aa17.3■□□□□ 0.36
COL1A1-203ENST00000471344 FGFR4P22455 802 aa17.3■□□□□ 0.36
COL1A1-203ENST00000471344 KCNA5P22460 613 aa17.3■□□□□ 0.36
COL1A1-203ENST00000471344 SARSP49591 514 aaKnown RBP17.3■□□□□ 0.36
COL1A1-203ENST00000471344 NR5A1Q13285 461 aa17.3■□□□□ 0.36
COL1A1-203ENST00000471344 TARBP2Q15633 366 aaKnown RBP17.3■□□□□ 0.36
COL1A1-203ENST00000471344 PTPROQ16827 1216 aa17.3■□□□□ 0.36
COL1A1-203ENST00000471344 MTERF2Q49AM1 385 aa17.3■□□□□ 0.36
COL1A1-203ENST00000471344 MOXD1Q6UVY6 613 aa17.3■□□□□ 0.36
COL1A1-203ENST00000471344 CEP89Q96ST8 783 aa17.3■□□□□ 0.36
COL1A1-203ENST00000471344 ALG13Q9NP73 1137 aaKnown RBP17.3■□□□□ 0.36
COL1A1-203ENST00000471344 KCNMB3Q9NPA1 279 aa17.3■□□□□ 0.36
COL1A1-203ENST00000471344 VAV3Q9UKW4 847 aa17.3■□□□□ 0.36
COL1A1-203ENST00000471344 CEP131Q9UPN4 1083 aa17.3■□□□□ 0.36
COL1A1-203ENST00000471344 PLXNA4Q9HCM2 1894 aa17.3■□□□□ 0.36
COL1A1-203ENST00000471344 DENND3A2RUS2 1198 aa17.29■□□□□ 0.36
COL1A1-203ENST00000471344 C9IYK1 514 aa17.29■□□□□ 0.36
COL1A1-203ENST00000471344 MAGEB2O15479 319 aa17.29■□□□□ 0.36
COL1A1-203ENST00000471344 CSDE1O75534 798 aaKnown RBP17.29■□□□□ 0.36
COL1A1-203ENST00000471344 DNAJB1P25685 340 aa17.29■□□□□ 0.36
COL1A1-203ENST00000471344 DSC3Q14574 896 aa17.29■□□□□ 0.36
COL1A1-203ENST00000471344 ANKRD1Q15327 319 aa17.29■□□□□ 0.36
COL1A1-203ENST00000471344 TIGD5Q53EQ6 642 aa17.29■□□□□ 0.36
COL1A1-203ENST00000471344 FAM102BQ5T8I3 360 aa17.29■□□□□ 0.36
COL1A1-203ENST00000471344 PLA2G4FQ68DD2 849 aa17.29■□□□□ 0.36
COL1A1-203ENST00000471344 NEK8Q86SG6 692 aa17.29■□□□□ 0.36
COL1A1-203ENST00000471344 POTEDQ86YR6 584 aa17.29■□□□□ 0.36
COL1A1-203ENST00000471344 CMTR2Q8IYT2 770 aaKnown RBP17.29■□□□□ 0.36
COL1A1-203ENST00000471344 FAM177A1Q8N128 213 aaPredicted RBP17.29■□□□□ 0.36
COL1A1-203ENST00000471344 NSUN7Q8NE18 718 aaKnown RBP17.29■□□□□ 0.36
COL1A1-203ENST00000471344 C11orf84Q9BUA3 381 aaPredicted RBP17.29■□□□□ 0.36
COL1A1-203ENST00000471344 RGS18Q9NS28 235 aa17.29■□□□□ 0.36
COL1A1-203ENST00000471344 NRBP2Q9NSY0 501 aa17.29■□□□□ 0.36
COL1A1-203ENST00000471344 WRAP73Q9P2S5 460 aaPredicted RBP17.29■□□□□ 0.36
COL1A1-203ENST00000471344 LRFN2Q9ULH4 789 aa17.29■□□□□ 0.36
COL1A1-203ENST00000471344 H3BQ06 376 aaPredicted RBP17.28■□□□□ 0.36
COL1A1-203ENST00000471344 WNT7AO00755 349 aa17.28■□□□□ 0.36
COL1A1-203ENST00000471344 GPR182O15218 404 aa17.28■□□□□ 0.36
COL1A1-203ENST00000471344 CCNT1O60563 726 aaKnown RBP17.28■□□□□ 0.36
COL1A1-203ENST00000471344 STAG3L1P0CL83 205 aa17.28■□□□□ 0.36
COL1A1-203ENST00000471344 FGFR1P11362 822 aa17.28■□□□□ 0.36
COL1A1-203ENST00000471344 GTF2F1P35269 517 aaKnown RBP eCLIP17.28■□□□□ 0.36
COL1A1-203ENST00000471344 GPC3P51654 580 aa17.28■□□□□ 0.36
COL1A1-203ENST00000471344 NEK4P51957 841 aa17.28■□□□□ 0.36
COL1A1-203ENST00000471344 TBC1D8BQ0IIM8 1120 aa17.28■□□□□ 0.36
COL1A1-203ENST00000471344 CAMK1Q14012 370 aa17.28■□□□□ 0.36
COL1A1-203ENST00000471344 RDM1Q8NG50 284 aa17.28■□□□□ 0.36
COL1A1-203ENST00000471344 HAS1Q92839 578 aa17.28■□□□□ 0.36
COL1A1-203ENST00000471344 TNFRSF25Q93038 417 aa17.28■□□□□ 0.36
COL1A1-203ENST00000471344 MAP7D2Q96T17 732 aa17.28■□□□□ 0.36
COL1A1-203ENST00000471344 NSUN3Q9H649 340 aaKnown RBP17.28■□□□□ 0.36
COL1A1-203ENST00000471344 ITGB1P05556 798 aa17.27■□□□□ 0.36
COL1A1-203ENST00000471344 RB1P06400 928 aa17.27■□□□□ 0.36
COL1A1-203ENST00000471344 PPP4R3AQ6IN85 833 aa17.27■□□□□ 0.36
COL1A1-203ENST00000471344 ANO5Q75V66 913 aa17.27■□□□□ 0.36
COL1A1-203ENST00000471344 ZNF579Q8NAF0 562 aaKnown RBP17.27■□□□□ 0.36
COL1A1-203ENST00000471344 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.27■□□□□ 0.36
COL1A1-203ENST00000471344 PLAGL2Q9UPG8 496 aa17.27■□□□□ 0.36
COL1A1-203ENST00000471344 RWDD3Q9Y3V2 267 aa17.27■□□□□ 0.36
COL1A1-203ENST00000471344 PCDHB7Q9Y5E2 793 aa17.27■□□□□ 0.36
COL1A1-203ENST00000471344 PCDHGC5Q9Y5F6 944 aa17.27■□□□□ 0.36
COL1A1-203ENST00000471344 TBKBP1A7MCY6 615 aa17.26■□□□□ 0.35
COL1A1-203ENST00000471344 DDX11L8A8MPP1 907 aa17.26■□□□□ 0.35
COL1A1-203ENST00000471344 MMP1P03956 469 aa17.26■□□□□ 0.35
COL1A1-203ENST00000471344 XBP1P17861 261 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms