RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 ZNF500O60304 480 aaPredicted RBP28.61■■■□□ 2.17
U2AF1-208ENST00000471250 PPP1R37O75864 691 aa28.61■■■□□ 2.17
U2AF1-208ENST00000471250 GNA14O95837 355 aa28.61■■■□□ 2.17
U2AF1-208ENST00000471250 OATP04181 439 aa28.61■■■□□ 2.17
U2AF1-208ENST00000471250 UBXN1Q04323 297 aa28.61■■■□□ 2.17
U2AF1-208ENST00000471250 ZC2HC1CQ53FD0 456 aaPredicted RBP28.61■■■□□ 2.17
U2AF1-208ENST00000471250 FAM160B1Q5W0V3 765 aa28.61■■■□□ 2.17
U2AF1-208ENST00000471250 NOC4LQ9BVI4 516 aaKnown RBP28.61■■■□□ 2.17
U2AF1-208ENST00000471250 PDLIM7Q9NR12 457 aa28.61■■■□□ 2.17
U2AF1-208ENST00000471250 PDGFCQ9NRA1 345 aa28.61■■■□□ 2.17
U2AF1-208ENST00000471250 TXNP10599 105 aaKnown RBP28.61■■■□□ 2.17
U2AF1-208ENST00000471250 DNM2P50570 870 aa28.61■■■□□ 2.17
U2AF1-208ENST00000471250 CCZ1BP86790 482 aa28.61■■■□□ 2.17
U2AF1-208ENST00000471250 CCZ1P86791 482 aaPredicted RBP28.61■■■□□ 2.17
U2AF1-208ENST00000471250 MIIPQ5JXC2 388 aa28.61■■■□□ 2.17
U2AF1-208ENST00000471250 DHX37Q8IY37 1157 aaKnown RBP28.61■■■□□ 2.17
U2AF1-208ENST00000471250 GPR20Q99678 358 aa28.61■■■□□ 2.17
U2AF1-208ENST00000471250 A0A1W2PQC6 194 aa28.6■■■□□ 2.17
U2AF1-208ENST00000471250 RBM47A0AV96 593 aaKnown RBP28.6■■■□□ 2.17
U2AF1-208ENST00000471250 DGAT1O75907 488 aa28.6■■■□□ 2.17
U2AF1-208ENST00000471250 TCF7P36402 384 aaPredicted RBP28.6■■■□□ 2.17
U2AF1-208ENST00000471250 KCNA1Q09470 495 aa28.6■■■□□ 2.17
U2AF1-208ENST00000471250 ADAM9Q13443 819 aa28.6■■■□□ 2.17
U2AF1-208ENST00000471250 ALCAMQ13740 583 aa28.6■■■□□ 2.17
U2AF1-208ENST00000471250 FAM102BQ5T8I3 360 aa28.6■■■□□ 2.17
U2AF1-208ENST00000471250 TAPT1Q6NXT6 567 aa28.6■■■□□ 2.17
U2AF1-208ENST00000471250 KIAA1524Q8TCG1 905 aa28.6■■■□□ 2.17
U2AF1-208ENST00000471250 NIFKQ9BYG3 293 aaKnown RBP28.6■■■□□ 2.17
U2AF1-208ENST00000471250 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.6■■■□□ 2.17
U2AF1-208ENST00000471250 ZMYM2Q9UBW7 1377 aa28.59■■■□□ 2.17
U2AF1-208ENST00000471250 CETN3O15182 167 aa28.59■■■□□ 2.17
U2AF1-208ENST00000471250 STAT5BP51692 787 aa28.59■■■□□ 2.17
U2AF1-208ENST00000471250 MARSP56192 900 aaKnown RBP28.59■■■□□ 2.17
U2AF1-208ENST00000471250 NFIL3Q16649 462 aa28.59■■■□□ 2.17
U2AF1-208ENST00000471250 MAN2A1Q16706 1144 aa28.59■■■□□ 2.17
U2AF1-208ENST00000471250 C17orf99Q6UX52 265 aa28.59■■■□□ 2.17
U2AF1-208ENST00000471250 MCPH1Q8NEM0 835 aa28.59■■■□□ 2.17
U2AF1-208ENST00000471250 HHIPL1Q96JK4 782 aa28.59■■■□□ 2.17
U2AF1-208ENST00000471250 MAML3Q96JK9 1138 aa28.59■■■□□ 2.17
U2AF1-208ENST00000471250 ST6GALNAC4Q9H4F1 302 aa28.59■■■□□ 2.17
U2AF1-208ENST00000471250 GPRC5CQ9NQ84 441 aa28.59■■■□□ 2.17
U2AF1-208ENST00000471250 ABT1Q9ULW3 272 aaKnown RBP28.59■■■□□ 2.17
U2AF1-208ENST00000471250 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.59■■■□□ 2.17
U2AF1-208ENST00000471250 K7ENM7 598 aa28.58■■■□□ 2.17
U2AF1-208ENST00000471250 TGFB1I1O43294 461 aa28.58■■■□□ 2.17
U2AF1-208ENST00000471250 LGR5O75473 907 aa28.58■■■□□ 2.17
U2AF1-208ENST00000471250 SREBF2Q12772 1141 aa28.58■■■□□ 2.17
U2AF1-208ENST00000471250 KIFAP3Q92845 792 aa28.58■■■□□ 2.17
U2AF1-208ENST00000471250 KATNBL1Q9H079 304 aa28.58■■■□□ 2.17
U2AF1-208ENST00000471250 NKRFO15226 690 aaKnown RBP eCLIP28.58■■■□□ 2.16
U2AF1-208ENST00000471250 TLR2O60603 784 aa28.58■■■□□ 2.16
U2AF1-208ENST00000471250 NR2F2P24468 414 aa28.58■■■□□ 2.16
U2AF1-208ENST00000471250 CCDC40Q4G0X9 1142 aa28.58■■■□□ 2.16
U2AF1-208ENST00000471250 VWA3BQ502W6 1294 aa28.58■■■□□ 2.16
U2AF1-208ENST00000471250 SLC17A8Q8NDX2 589 aa28.58■■■□□ 2.16
U2AF1-208ENST00000471250 COPS5Q92905 334 aa28.58■■■□□ 2.16
U2AF1-208ENST00000471250 C17orf75Q9HAS0 396 aa28.58■■■□□ 2.16
U2AF1-208ENST00000471250 ATP6V0A4Q9HBG4 840 aa28.58■■■□□ 2.16
U2AF1-208ENST00000471250 NRBP2Q9NSY0 501 aa28.58■■■□□ 2.16
U2AF1-208ENST00000471250 TMEM88BA6NKF7 163 aa28.57■■■□□ 2.16
U2AF1-208ENST00000471250 PES1O00541 588 aaKnown RBP28.57■■■□□ 2.16
U2AF1-208ENST00000471250 SNAI1O95863 264 aaPredicted RBP28.57■■■□□ 2.16
U2AF1-208ENST00000471250 SKILP12757 684 aa28.57■■■□□ 2.16
U2AF1-208ENST00000471250 NCKAP1LP55160 1127 aa28.57■■■□□ 2.16
U2AF1-208ENST00000471250 HSDL1Q3SXM5 330 aa28.57■■■□□ 2.16
U2AF1-208ENST00000471250 MTERF2Q49AM1 385 aa28.57■■■□□ 2.16
U2AF1-208ENST00000471250 MORN1Q5T089 497 aa28.57■■■□□ 2.16
U2AF1-208ENST00000471250 PPFIBP1Q86W92 1011 aa28.57■■■□□ 2.16
U2AF1-208ENST00000471250 KSR1Q8IVT5 923 aa28.57■■■□□ 2.16
U2AF1-208ENST00000471250 SPATA33Q96N06 139 aa28.57■■■□□ 2.16
U2AF1-208ENST00000471250 XPNPEP1Q9NQW7 623 aa28.57■■■□□ 2.16
U2AF1-208ENST00000471250 SLC5A4Q9NY91 659 aa28.57■■■□□ 2.16
U2AF1-208ENST00000471250 NOP56O00567 594 aaKnown RBP28.56■■■□□ 2.16
U2AF1-208ENST00000471250 NR3C1P04150 777 aa28.56■■■□□ 2.16
U2AF1-208ENST00000471250 RPL13P26373 211 aaKnown RBP28.56■■■□□ 2.16
U2AF1-208ENST00000471250 PEX3P56589 373 aa28.56■■■□□ 2.16
U2AF1-208ENST00000471250 TBC1D8BQ0IIM8 1120 aa28.56■■■□□ 2.16
U2AF1-208ENST00000471250 CEP135Q66GS9 1140 aa28.56■■■□□ 2.16
U2AF1-208ENST00000471250 TC2NQ8N9U0 490 aa28.56■■■□□ 2.16
U2AF1-208ENST00000471250 NPLOC4Q8TAT6 608 aa28.56■■■□□ 2.16
U2AF1-208ENST00000471250 AZI2Q9H6S1 392 aa28.56■■■□□ 2.16
U2AF1-208ENST00000471250 ZFYVE28Q9HCC9 887 aa28.56■■■□□ 2.16
U2AF1-208ENST00000471250 RTP1P59025 263 aa28.55■■■□□ 2.16
U2AF1-208ENST00000471250 TRIM14Q14142 442 aa28.55■■■□□ 2.16
U2AF1-208ENST00000471250 TMEM63BQ5T3F8 832 aa28.55■■■□□ 2.16
U2AF1-208ENST00000471250 CEP89Q96ST8 783 aa28.55■■■□□ 2.16
U2AF1-208ENST00000471250 TMX1Q9H3N1 280 aa28.55■■■□□ 2.16
U2AF1-208ENST00000471250 NDST4Q9H3R1 872 aa28.55■■■□□ 2.16
U2AF1-208ENST00000471250 AKR1B15C9JRZ8 316 aaPredicted RBP28.54■■■□□ 2.16
U2AF1-208ENST00000471250 TM4SF4P48230 202 aa28.54■■■□□ 2.16
U2AF1-208ENST00000471250 GTF2BQ00403 316 aa28.54■■■□□ 2.16
U2AF1-208ENST00000471250 RBL2Q08999 1139 aa28.54■■■□□ 2.16
U2AF1-208ENST00000471250 GOLGA8FQ08AF8 430 aa28.54■■■□□ 2.16
U2AF1-208ENST00000471250 GOLGA8DPQ0D2H9 430 aa28.54■■■□□ 2.16
U2AF1-208ENST00000471250 FKBP15Q5T1M5 1219 aa28.54■■■□□ 2.16
U2AF1-208ENST00000471250 PLPPR4Q7Z2D5 763 aa28.54■■■□□ 2.16
U2AF1-208ENST00000471250 MSL3Q8N5Y2 521 aaKnown RBP28.54■■■□□ 2.16
U2AF1-208ENST00000471250 CCDC112Q8NEF3 446 aa28.54■■■□□ 2.16
U2AF1-208ENST00000471250 SPIRE2Q8WWL2 714 aa28.54■■■□□ 2.16
U2AF1-208ENST00000471250 FAM167AQ96KS9 214 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms