RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 DRP2Q13474 957 aa9.21□□□□□ -0.94
GTF3A-206ENST00000470606 STIM1Q13586 685 aa9.21□□□□□ -0.94
GTF3A-206ENST00000470606 ACVR2BQ13705 512 aa9.21□□□□□ -0.94
GTF3A-206ENST00000470606 MTERF2Q49AM1 385 aa9.21□□□□□ -0.94
GTF3A-206ENST00000470606 XKR3Q5GH77 459 aa9.21□□□□□ -0.94
GTF3A-206ENST00000470606 ODR4Q5SWX8 454 aa9.21□□□□□ -0.94
GTF3A-206ENST00000470606 KCNV1Q6PIU1 500 aa9.21□□□□□ -0.94
GTF3A-206ENST00000470606 CCDC186Q7Z3E2 898 aa9.21□□□□□ -0.94
GTF3A-206ENST00000470606 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.21□□□□□ -0.94
GTF3A-206ENST00000470606 ZC3H3Q8IXZ2 948 aaKnown RBP9.21□□□□□ -0.94
GTF3A-206ENST00000470606 DHX37Q8IY37 1157 aaKnown RBP9.21□□□□□ -0.94
GTF3A-206ENST00000470606 MPHOSPH6Q99547 160 aaKnown RBP9.21□□□□□ -0.94
GTF3A-206ENST00000470606 KIFC3Q9BVG8 833 aa9.21□□□□□ -0.94
GTF3A-206ENST00000470606 THAP9Q9H5L6 903 aa9.21□□□□□ -0.94
GTF3A-206ENST00000470606 RTN4Q9NQC3 1192 aaKnown RBP9.21□□□□□ -0.94
GTF3A-206ENST00000470606 CREBZFQ9NS37 354 aa9.21□□□□□ -0.94
GTF3A-206ENST00000470606 TAB2Q9NYJ8 693 aa9.21□□□□□ -0.94
GTF3A-206ENST00000470606 GABRQQ9UN88 632 aa9.21□□□□□ -0.94
GTF3A-206ENST00000470606 TRIP12Q14669 1992 aaPredicted RBP9.2□□□□□ -0.94
GTF3A-206ENST00000470606 TISP43B9A030 160 aa9.2□□□□□ -0.94
GTF3A-206ENST00000470606 GCNT3O95395 438 aa9.2□□□□□ -0.94
GTF3A-206ENST00000470606 TBC1D8O95759 1140 aa9.2□□□□□ -0.94
GTF3A-206ENST00000470606 ZNF865P0CJ78 1059 aaPredicted RBP9.2□□□□□ -0.94
GTF3A-206ENST00000470606 GAP43P17677 238 aa9.2□□□□□ -0.94
GTF3A-206ENST00000470606 CDK11BP21127 795 aaKnown RBP9.2□□□□□ -0.94
GTF3A-206ENST00000470606 YY1P25490 414 aa9.2□□□□□ -0.94
GTF3A-206ENST00000470606 MARK3P27448 753 aa9.2□□□□□ -0.94
GTF3A-206ENST00000470606 APLP1P51693 650 aa9.2□□□□□ -0.94
GTF3A-206ENST00000470606 TPM4P67936 248 aa9.2□□□□□ -0.94
GTF3A-206ENST00000470606 LRRC63Q05C16 580 aa9.2□□□□□ -0.94
GTF3A-206ENST00000470606 LRMPQ12912 555 aa9.2□□□□□ -0.94
GTF3A-206ENST00000470606 NOGQ13253 232 aa9.2□□□□□ -0.94
GTF3A-206ENST00000470606 KNOP1Q1ED39 458 aaKnown RBP9.2□□□□□ -0.94
GTF3A-206ENST00000470606 MIIPQ5JXC2 388 aa9.2□□□□□ -0.94
GTF3A-206ENST00000470606 CEP135Q66GS9 1140 aa9.2□□□□□ -0.94
GTF3A-206ENST00000470606 VSTM4Q8IW00 320 aa9.2□□□□□ -0.94
GTF3A-206ENST00000470606 AFG1LQ8WV93 481 aa9.2□□□□□ -0.94
GTF3A-206ENST00000470606 NIFKQ9BYG3 293 aaKnown RBP9.2□□□□□ -0.94
GTF3A-206ENST00000470606 GTPBP4Q9BZE4 634 aaKnown RBP9.2□□□□□ -0.94
GTF3A-206ENST00000470606 RNPEPQ9H4A4 650 aa9.2□□□□□ -0.94
GTF3A-206ENST00000470606 DHX33Q9H6R0 707 aaKnown RBP9.2□□□□□ -0.94
GTF3A-206ENST00000470606 KAT6AQ92794 2004 aa9.2□□□□□ -0.94
GTF3A-206ENST00000470606 BICDL2A1A5D9 508 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 PLS3P13797 630 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 COPB1P53618 953 aaKnown RBP9.19□□□□□ -0.94
GTF3A-206ENST00000470606 PEX3P56589 373 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 GOLGA8FQ08AF8 430 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 GOLGA8DPQ0D2H9 430 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 MKRN4PQ13434 485 aaPredicted RBP9.19□□□□□ -0.94
GTF3A-206ENST00000470606 PLCB4Q15147 1175 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 TPD52L1Q16890 204 aaPredicted RBP9.19□□□□□ -0.94
GTF3A-206ENST00000470606 OLFML2BQ68BL8 750 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 FOXR2Q6PJQ5 311 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 TMC6Q7Z403 805 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 CREBRFQ8IUR6 639 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 FAM178BQ8IXR5 827 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 CACTINQ8WUQ7 758 aaKnown RBP9.19□□□□□ -0.94
GTF3A-206ENST00000470606 TRAPPC12Q8WVT3 735 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 EMID1Q96A84 441 aaPredicted RBP9.19□□□□□ -0.94
GTF3A-206ENST00000470606 TMEM143Q96AN5 459 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 CNOT6LQ96LI5 555 aaKnown RBP9.19□□□□□ -0.94
GTF3A-206ENST00000470606 C16orf70Q9BSU1 422 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 VPS16Q9H269 839 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 ABHD16BQ9H3Z7 469 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 ZHX1Q9UKY1 873 aaPredicted RBP9.19□□□□□ -0.94
GTF3A-206ENST00000470606 TRAF3IP3Q9Y228 551 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.19□□□□□ -0.94
GTF3A-206ENST00000470606 EMSYQ7Z589 1322 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 RNF225M0QZC1 329 aaPredicted RBP9.19□□□□□ -0.94
GTF3A-206ENST00000470606 NOP56O00567 594 aaKnown RBP9.19□□□□□ -0.94
GTF3A-206ENST00000470606 TNPO2O14787 897 aaKnown RBP9.19□□□□□ -0.94
GTF3A-206ENST00000470606 EIF3DO15371 548 aaKnown RBP eCLIP9.19□□□□□ -0.94
GTF3A-206ENST00000470606 SLC16A4O15374 487 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 DGAT1O75907 488 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 ZNF286BP0CG31 522 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 PPP1R2P41236 205 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 PSMC4P43686 418 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 NPTX2P47972 431 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 LACTBP83111 547 aaPredicted RBP9.19□□□□□ -0.94
GTF3A-206ENST00000470606 TBX2Q13207 712 aaPredicted RBP9.19□□□□□ -0.94
GTF3A-206ENST00000470606 EMC2Q15006 297 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 DUSP28Q4G0W2 176 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 FAM102BQ5T8I3 360 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 ARMCX5Q6P1M9 558 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 OTUD6AQ7L8S5 288 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 TAS1R3Q7RTX0 852 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 FILIP1Q7Z7B0 1213 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 TMEM161BQ8NDZ6 487 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 TRPV1Q8NER1 839 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 SEL1LQ9UBV2 794 aa9.19□□□□□ -0.94
GTF3A-206ENST00000470606 GNEQ9Y223 722 aaKnown RBP9.19□□□□□ -0.94
GTF3A-206ENST00000470606 CLIC2O15247 247 aa9.18□□□□□ -0.94
GTF3A-206ENST00000470606 GH1P01241 217 aa9.18□□□□□ -0.94
GTF3A-206ENST00000470606 LGALS2P05162 132 aa9.18□□□□□ -0.94
GTF3A-206ENST00000470606 HOXD8P13378 290 aaPredicted RBP9.18□□□□□ -0.94
GTF3A-206ENST00000470606 EEF1GP26641 437 aaKnown RBP9.18□□□□□ -0.94
GTF3A-206ENST00000470606 CASP4P49662 377 aa9.18□□□□□ -0.94
GTF3A-206ENST00000470606 VEGFBP49765 207 aa9.18□□□□□ -0.94
GTF3A-206ENST00000470606 NCKAP1LP55160 1127 aa9.18□□□□□ -0.94
GTF3A-206ENST00000470606 FKBP3Q00688 224 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms