RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ARMCX2Q7L311 632 aa19.97■□□□□ 0.79
SMC4-211ENST00000469858 SAPCD2Q86UD0 394 aa19.97■□□□□ 0.79
SMC4-211ENST00000469858 IKZF4Q9H2S9 585 aa19.97■□□□□ 0.79
SMC4-211ENST00000469858 TMX1Q9H3N1 280 aa19.97■□□□□ 0.79
SMC4-211ENST00000469858 NDST4Q9H3R1 872 aa19.97■□□□□ 0.79
SMC4-211ENST00000469858 SPTLC3Q9NUV7 552 aa19.97■□□□□ 0.79
SMC4-211ENST00000469858 MAFBQ9Y5Q3 323 aaPredicted RBP19.97■□□□□ 0.79
SMC4-211ENST00000469858 GSTTP1A0A1W2PQM5 241 aa19.97■□□□□ 0.79
SMC4-211ENST00000469858 STRNO43815 780 aa19.97■□□□□ 0.79
SMC4-211ENST00000469858 FXR1P51114 621 aaKnown RBP eCLIP19.97■□□□□ 0.79
SMC4-211ENST00000469858 TRIM14Q14142 442 aa19.97■□□□□ 0.79
SMC4-211ENST00000469858 GPR142Q7Z601 462 aa19.97■□□□□ 0.79
SMC4-211ENST00000469858 ABRAQ8N0Z2 381 aa19.97■□□□□ 0.79
SMC4-211ENST00000469858 CYP26B1Q9NR63 512 aa19.97■□□□□ 0.79
SMC4-211ENST00000469858 IGF2BP3O00425 579 aaKnown RBP eCLIP19.96■□□□□ 0.79
SMC4-211ENST00000469858 CLIC2O15247 247 aa19.96■□□□□ 0.79
SMC4-211ENST00000469858 TGFB1I1O43294 461 aa19.96■□□□□ 0.79
SMC4-211ENST00000469858 MFAP3LO75121 409 aa19.96■□□□□ 0.79
SMC4-211ENST00000469858 NR3C1P04150 777 aa19.96■□□□□ 0.79
SMC4-211ENST00000469858 ATP4AP20648 1035 aa19.96■□□□□ 0.79
SMC4-211ENST00000469858 PEX3P56589 373 aa19.96■□□□□ 0.79
SMC4-211ENST00000469858 SYCP1Q15431 976 aa19.96■□□□□ 0.79
SMC4-211ENST00000469858 MTERF2Q49AM1 385 aa19.96■□□□□ 0.79
SMC4-211ENST00000469858 RGMBQ6NW40 437 aa19.96■□□□□ 0.79
SMC4-211ENST00000469858 IGKV6D-21A0A0A0MT36 114 aa19.95■□□□□ 0.78
SMC4-211ENST00000469858 MANSC4A6NHS7 340 aaPredicted RBP19.95■□□□□ 0.78
SMC4-211ENST00000469858 PPP1R37O75864 691 aa19.95■□□□□ 0.78
SMC4-211ENST00000469858 OATP04181 439 aa19.95■□□□□ 0.78
SMC4-211ENST00000469858 TCF7P36402 384 aaPredicted RBP19.95■□□□□ 0.78
SMC4-211ENST00000469858 TMEM139Q8IV31 216 aa19.95■□□□□ 0.78
SMC4-211ENST00000469858 CNGA4Q8IV77 575 aa19.95■□□□□ 0.78
SMC4-211ENST00000469858 PCMTD1Q96MG8 357 aaPredicted RBP19.95■□□□□ 0.78
SMC4-211ENST00000469858 PCYT2Q99447 389 aa19.95■□□□□ 0.78
SMC4-211ENST00000469858 BAG1Q99933 345 aaPredicted RBP19.95■□□□□ 0.78
SMC4-211ENST00000469858 STRA6Q9BX79 667 aa19.95■□□□□ 0.78
SMC4-211ENST00000469858 PDGFCQ9NRA1 345 aa19.95■□□□□ 0.78
SMC4-211ENST00000469858 CPA4Q9UI42 421 aa19.95■□□□□ 0.78
SMC4-211ENST00000469858 DGAT1O75907 488 aa19.95■□□□□ 0.78
SMC4-211ENST00000469858 MAPTP10636 758 aaKnown RBP19.95■□□□□ 0.78
SMC4-211ENST00000469858 RPL13P26373 211 aaKnown RBP19.95■□□□□ 0.78
SMC4-211ENST00000469858 KLK7P49862 253 aa19.95■□□□□ 0.78
SMC4-211ENST00000469858 MARSP56192 900 aaKnown RBP19.95■□□□□ 0.78
SMC4-211ENST00000469858 CELF3Q5SZQ8 465 aaKnown RBP19.95■□□□□ 0.78
SMC4-211ENST00000469858 SEPT1Q8WYJ6 367 aa19.95■□□□□ 0.78
SMC4-211ENST00000469858 NOP56O00567 594 aaKnown RBP19.94■□□□□ 0.78
SMC4-211ENST00000469858 TXNP10599 105 aaKnown RBP19.94■□□□□ 0.78
SMC4-211ENST00000469858 SOX10P56693 466 aa19.94■□□□□ 0.78
SMC4-211ENST00000469858 ALCAMQ13740 583 aa19.94■□□□□ 0.78
SMC4-211ENST00000469858 HSDL1Q3SXM5 330 aa19.94■□□□□ 0.78
SMC4-211ENST00000469858 FAM160B1Q5W0V3 765 aa19.94■□□□□ 0.78
SMC4-211ENST00000469858 CCDC62Q6P9F0 684 aa19.94■□□□□ 0.78
SMC4-211ENST00000469858 HS2ST1Q7LGA3 356 aa19.94■□□□□ 0.78
SMC4-211ENST00000469858 DPP9Q86TI2 863 aa19.94■□□□□ 0.78
SMC4-211ENST00000469858 DHX37Q8IY37 1157 aaKnown RBP19.94■□□□□ 0.78
SMC4-211ENST00000469858 SYCP3Q8IZU3 236 aa19.94■□□□□ 0.78
SMC4-211ENST00000469858 PANX2Q96RD6 677 aa19.94■□□□□ 0.78
SMC4-211ENST00000469858 ERGIC2Q96RQ1 377 aa19.94■□□□□ 0.78
SMC4-211ENST00000469858 GBP3Q9H0R5 595 aa19.94■□□□□ 0.78
SMC4-211ENST00000469858 ATP6V0A4Q9HBG4 840 aa19.94■□□□□ 0.78
SMC4-211ENST00000469858 PASKQ96RG2 1323 aa19.94■□□□□ 0.78
SMC4-211ENST00000469858 SLC16A4O15374 487 aa19.94■□□□□ 0.78
SMC4-211ENST00000469858 ECM2O94769 699 aaPredicted RBP19.94■□□□□ 0.78
SMC4-211ENST00000469858 MAPK4P31152 587 aa19.94■□□□□ 0.78
SMC4-211ENST00000469858 STAT5BP51692 787 aa19.94■□□□□ 0.78
SMC4-211ENST00000469858 GRB14Q14449 540 aa19.94■□□□□ 0.78
SMC4-211ENST00000469858 TTLL4Q14679 1199 aa19.94■□□□□ 0.78
SMC4-211ENST00000469858 TAF1CQ15572 869 aaPredicted RBP19.94■□□□□ 0.78
SMC4-211ENST00000469858 TMEM63BQ5T3F8 832 aa19.94■□□□□ 0.78
SMC4-211ENST00000469858 HAUS6Q7Z4H7 955 aa19.94■□□□□ 0.78
SMC4-211ENST00000469858 PLEKHH3Q7Z736 793 aa19.94■□□□□ 0.78
SMC4-211ENST00000469858 TRIM59Q8IWR1 403 aa19.94■□□□□ 0.78
SMC4-211ENST00000469858 MCPH1Q8NEM0 835 aa19.94■□□□□ 0.78
SMC4-211ENST00000469858 SCFD2Q8WU76 684 aa19.94■□□□□ 0.78
SMC4-211ENST00000469858 KIFAP3Q92845 792 aa19.94■□□□□ 0.78
SMC4-211ENST00000469858 COPS5Q92905 334 aa19.94■□□□□ 0.78
SMC4-211ENST00000469858 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.94■□□□□ 0.781e-8■■■■■ 54.3
SMC4-211ENST00000469858 RNF225M0QZC1 329 aaPredicted RBP19.93■□□□□ 0.78
SMC4-211ENST00000469858 AKAP3O75969 853 aa19.93■□□□□ 0.78
SMC4-211ENST00000469858 TRIM21P19474 475 aaKnown RBP19.93■□□□□ 0.78
SMC4-211ENST00000469858 DMP1Q13316 513 aaPredicted RBP19.93■□□□□ 0.78
SMC4-211ENST00000469858 SPATA33Q96N06 139 aa19.93■□□□□ 0.78
SMC4-211ENST00000469858 GPR20Q99678 358 aa19.93■□□□□ 0.78
SMC4-211ENST00000469858 XPNPEP1Q9NQW7 623 aa19.93■□□□□ 0.78
SMC4-211ENST00000469858 TTC26A0AVF1 554 aa19.92■□□□□ 0.78
SMC4-211ENST00000469858 CCDC169A6NNP5 214 aa19.92■□□□□ 0.78
SMC4-211ENST00000469858 USP27XA6NNY8 438 aa19.92■□□□□ 0.78
SMC4-211ENST00000469858 STX10O60499 249 aa19.92■□□□□ 0.78
SMC4-211ENST00000469858 SLC10A3P09131 477 aa19.92■□□□□ 0.78
SMC4-211ENST00000469858 CASP4P49662 377 aa19.92■□□□□ 0.78
SMC4-211ENST00000469858 POLGP54098 1239 aaPredicted RBP19.92■□□□□ 0.78
SMC4-211ENST00000469858 NCKAP1LP55160 1127 aa19.92■□□□□ 0.78
SMC4-211ENST00000469858 BSNDQ8WZ55 320 aa19.92■□□□□ 0.78
SMC4-211ENST00000469858 AZI2Q9H6S1 392 aa19.92■□□□□ 0.78
SMC4-211ENST00000469858 PDLIM7Q9NR12 457 aa19.92■□□□□ 0.78
SMC4-211ENST00000469858 AGPAT3Q9NRZ7 376 aa19.92■□□□□ 0.78
SMC4-211ENST00000469858 ARMCX3Q9UH62 379 aaPredicted RBP19.92■□□□□ 0.78
SMC4-211ENST00000469858 ADGRA2Q96PE1 1338 aa19.92■□□□□ 0.78
SMC4-211ENST00000469858 ARHGAP6O43182 974 aa19.92■□□□□ 0.78
SMC4-211ENST00000469858 EPB41P11171 864 aaKnown RBP19.92■□□□□ 0.78
SMC4-211ENST00000469858 KRT9P35527 623 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms