RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 GJD3Q8N144 294 aa12.39□□□□□ -0.43
COL4A3-204ENST00000469504 SLC5A5Q92911 643 aa12.39□□□□□ -0.43
COL4A3-204ENST00000469504 POP1Q99575 1024 aaKnown RBP12.39□□□□□ -0.43
COL4A3-204ENST00000469504 TEKT3Q9BXF9 490 aa12.39□□□□□ -0.43
COL4A3-204ENST00000469504 TMX1Q9H3N1 280 aa12.39□□□□□ -0.43
COL4A3-204ENST00000469504 TMEM161AQ9NX61 479 aa12.39□□□□□ -0.43
COL4A3-204ENST00000469504 CLDND1Q9NY35 253 aa12.39□□□□□ -0.43
COL4A3-204ENST00000469504 ST3GAL5Q9UNP4 418 aa12.39□□□□□ -0.43
COL4A3-204ENST00000469504 GINS2Q9Y248 185 aa12.39□□□□□ -0.43
COL4A3-204ENST00000469504 NOC2LQ9Y3T9 749 aaKnown RBP12.39□□□□□ -0.43
COL4A3-204ENST00000469504 PCDHB12Q9Y5F1 795 aa12.39□□□□□ -0.43
COL4A3-204ENST00000469504 MRPL42Q9Y6G3 142 aaKnown RBP12.39□□□□□ -0.43
COL4A3-204ENST00000469504 NLRC5Q86WI3 1866 aa12.38□□□□□ -0.43
COL4A3-204ENST00000469504 CARNS1A5YM72 827 aa12.38□□□□□ -0.43
COL4A3-204ENST00000469504 C9IYK1 514 aa12.38□□□□□ -0.43
COL4A3-204ENST00000469504 MSH4O15457 936 aa12.38□□□□□ -0.43
COL4A3-204ENST00000469504 EIF5BO60841 1220 aaKnown RBP12.38□□□□□ -0.43
COL4A3-204ENST00000469504 GPR32O75388 356 aa12.38□□□□□ -0.43
COL4A3-204ENST00000469504 OATP04181 439 aa12.38□□□□□ -0.43
COL4A3-204ENST00000469504 ALADP13716 330 aa12.38□□□□□ -0.43
COL4A3-204ENST00000469504 XBP1P17861 261 aa12.38□□□□□ -0.43
COL4A3-204ENST00000469504 TOB2Q14106 344 aaPredicted RBP12.38□□□□□ -0.43
COL4A3-204ENST00000469504 KIZQ2M2Z5 673 aa12.38□□□□□ -0.43
COL4A3-204ENST00000469504 TMEM31Q5JXX7 168 aa12.38□□□□□ -0.43
COL4A3-204ENST00000469504 LRCH2Q5VUJ6 765 aa12.38□□□□□ -0.43
COL4A3-204ENST00000469504 PDE12Q6L8Q7 609 aaKnown RBP12.38□□□□□ -0.43
COL4A3-204ENST00000469504 METTL13Q8N6R0 699 aa12.38□□□□□ -0.43
COL4A3-204ENST00000469504 LINC01465Q8N7H1 131 aa12.38□□□□□ -0.43
COL4A3-204ENST00000469504 RASGRP4Q8TDF6 673 aa12.38□□□□□ -0.43
COL4A3-204ENST00000469504 TBCKQ8TEA7 893 aa12.38□□□□□ -0.43
COL4A3-204ENST00000469504 TMEM40Q8WWA1 233 aa12.38□□□□□ -0.43
COL4A3-204ENST00000469504 ADAM2Q99965 735 aa12.38□□□□□ -0.43
COL4A3-204ENST00000469504 ATP6V0A4Q9HBG4 840 aa12.38□□□□□ -0.43
COL4A3-204ENST00000469504 TCF20Q9UGU0 1960 aaKnown RBP12.38□□□□□ -0.43
COL4A3-204ENST00000469504 H3BQ06 376 aaPredicted RBP12.37□□□□□ -0.43
COL4A3-204ENST00000469504 DKC1O60832 514 aaKnown RBP eCLIP12.37□□□□□ -0.43
COL4A3-204ENST00000469504 ITGB1P05556 798 aa12.37□□□□□ -0.43
COL4A3-204ENST00000469504 IL9P15248 144 aa12.37□□□□□ -0.43
COL4A3-204ENST00000469504 ZSCAN20P17040 1043 aaPredicted RBP12.37□□□□□ -0.43
COL4A3-204ENST00000469504 EIF4BP23588 611 aaKnown RBP12.37□□□□□ -0.43
COL4A3-204ENST00000469504 FAM189BP81408 668 aa12.37□□□□□ -0.43
COL4A3-204ENST00000469504 PRKCEQ02156 737 aa12.37□□□□□ -0.43
COL4A3-204ENST00000469504 TMEM266Q2M3C6 531 aa12.37□□□□□ -0.43
COL4A3-204ENST00000469504 EFCAB12Q6NXP0 572 aa12.37□□□□□ -0.43
COL4A3-204ENST00000469504 FAM228AQ86W67 206 aa12.37□□□□□ -0.43
COL4A3-204ENST00000469504 BLIDQ8IZY5 108 aa12.37□□□□□ -0.43
COL4A3-204ENST00000469504 KLHL23Q8NBE8 558 aa12.37□□□□□ -0.43
COL4A3-204ENST00000469504 SPPL3Q8TCT6 385 aa12.37□□□□□ -0.43
COL4A3-204ENST00000469504 MBOAT7Q96N66 472 aa12.37□□□□□ -0.43
COL4A3-204ENST00000469504 CDCA3Q99618 268 aaPredicted RBP12.37□□□□□ -0.43
COL4A3-204ENST00000469504 OSMRQ99650 979 aa12.37□□□□□ -0.43
COL4A3-204ENST00000469504 NAP1L4Q99733 375 aaKnown RBP12.37□□□□□ -0.43
COL4A3-204ENST00000469504 JPH2Q9BR39 696 aaPredicted RBP12.37□□□□□ -0.43
COL4A3-204ENST00000469504 UPF3BQ9BZI7 483 aaKnown RBP12.37□□□□□ -0.43
COL4A3-204ENST00000469504 NCOA5Q9HCD5 579 aaKnown RBP12.37□□□□□ -0.43
COL4A3-204ENST00000469504 AKT3Q9Y243 479 aa12.37□□□□□ -0.43
COL4A3-204ENST00000469504 LZTS1Q9Y250 596 aa12.37□□□□□ -0.43
COL4A3-204ENST00000469504 HCN4Q9Y3Q4 1203 aa12.37□□□□□ -0.43
COL4A3-204ENST00000469504 M0R2N6 131 aa12.36□□□□□ -0.43
COL4A3-204ENST00000469504 PSMD10O75832 226 aa12.36□□□□□ -0.43
COL4A3-204ENST00000469504 NEFLP07196 543 aa12.36□□□□□ -0.43
COL4A3-204ENST00000469504 GCFC2P16383 781 aaKnown RBP12.36□□□□□ -0.43
COL4A3-204ENST00000469504 LAG3P18627 525 aa12.36□□□□□ -0.43
COL4A3-204ENST00000469504 SSTR3P32745 418 aaPredicted RBP12.36□□□□□ -0.43
COL4A3-204ENST00000469504 TBC1D8BQ0IIM8 1120 aa12.36□□□□□ -0.43
COL4A3-204ENST00000469504 HYAL1Q12794 435 aa12.36□□□□□ -0.43
COL4A3-204ENST00000469504 SMAD4Q13485 552 aaKnown RBP12.36□□□□□ -0.43
COL4A3-204ENST00000469504 DSC3Q14574 896 aa12.36□□□□□ -0.43
COL4A3-204ENST00000469504 NONOQ15233 471 aaKnown RBP eCLIP12.36□□□□□ -0.43
COL4A3-204ENST00000469504 ANKRD1Q15327 319 aa12.36□□□□□ -0.43
COL4A3-204ENST00000469504 SMAD2Q15796 467 aaKnown RBP12.36□□□□□ -0.43
COL4A3-204ENST00000469504 XKR3Q5GH77 459 aa12.36□□□□□ -0.43
COL4A3-204ENST00000469504 EP400NLQ6ZTU2 488 aa12.36□□□□□ -0.43
COL4A3-204ENST00000469504 KRT25Q7Z3Z0 450 aa12.36□□□□□ -0.43
COL4A3-204ENST00000469504 ADHFE1Q8IWW8 467 aa12.36□□□□□ -0.43
COL4A3-204ENST00000469504 EXOC8Q8IYI6 725 aa12.36□□□□□ -0.43
COL4A3-204ENST00000469504 EFHBQ8N7U6 833 aa12.36□□□□□ -0.43
COL4A3-204ENST00000469504 POF1BQ8WVV4 589 aa12.36□□□□□ -0.43
COL4A3-204ENST00000469504 NIFKQ9BYG3 293 aaKnown RBP12.36□□□□□ -0.43
COL4A3-204ENST00000469504 TMEM117Q9H0C3 514 aa12.36□□□□□ -0.43
COL4A3-204ENST00000469504 EPHX3Q9H6B9 360 aa12.36□□□□□ -0.43
COL4A3-204ENST00000469504 CDHR5Q9HBB8 845 aa12.36□□□□□ -0.43
COL4A3-204ENST00000469504 ALG13Q9NP73 1137 aaKnown RBP12.36□□□□□ -0.43
COL4A3-204ENST00000469504 PDRG1Q9NUG6 133 aa12.36□□□□□ -0.43
COL4A3-204ENST00000469504 DACT1Q9NYF0 836 aa12.36□□□□□ -0.43
COL4A3-204ENST00000469504 PPME1Q9Y570 386 aa12.36□□□□□ -0.43
COL4A3-204ENST00000469504 STK36Q9NRP7 1315 aa12.36□□□□□ -0.43
COL4A3-204ENST00000469504 TBKBP1A7MCY6 615 aa12.35□□□□□ -0.43
COL4A3-204ENST00000469504 ADAMTS3O15072 1205 aa12.35□□□□□ -0.43
COL4A3-204ENST00000469504 EDIL3O43854 480 aa12.35□□□□□ -0.43
COL4A3-204ENST00000469504 ZNF862O60290 1169 aa12.35□□□□□ -0.43
COL4A3-204ENST00000469504 MGEA5O60502 916 aa12.35□□□□□ -0.43
COL4A3-204ENST00000469504 EYA4O95677 639 aa12.35□□□□□ -0.43
COL4A3-204ENST00000469504 VTNP04004 478 aa12.35□□□□□ -0.43
COL4A3-204ENST00000469504 PPM1AP35813 382 aa12.35□□□□□ -0.43
COL4A3-204ENST00000469504 LTBRP36941 435 aa12.35□□□□□ -0.43
COL4A3-204ENST00000469504 DNM2P50570 870 aa12.35□□□□□ -0.43
COL4A3-204ENST00000469504 GPC3P51654 580 aa12.35□□□□□ -0.43
COL4A3-204ENST00000469504 CLCN3P51790 818 aa12.35□□□□□ -0.43
COL4A3-204ENST00000469504 NLRP11P59045 1033 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms