RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 INF2Q27J81 1249 aa24.56■■□□□ 1.52
TTC28-204ENST00000468807 KRT25Q7Z3Z0 450 aa24.56■■□□□ 1.52
TTC28-204ENST00000468807 ADAM2Q99965 735 aa24.56■■□□□ 1.52
TTC28-204ENST00000468807 PCDHB7Q9Y5E2 793 aa24.56■■□□□ 1.52
TTC28-204ENST00000468807 CCDC194A0A1B0GVG4 234 aa24.55■■□□□ 1.52
TTC28-204ENST00000468807 SARSP49591 514 aaKnown RBP24.55■■□□□ 1.52
TTC28-204ENST00000468807 GATMP50440 423 aa24.55■■□□□ 1.52
TTC28-204ENST00000468807 LETM2Q2VYF4 491 aa24.55■■□□□ 1.52
TTC28-204ENST00000468807 FAM177A1Q8N128 213 aaPredicted RBP24.55■■□□□ 1.52
TTC28-204ENST00000468807 SCLT1Q96NL6 688 aa24.55■■□□□ 1.52
TTC28-204ENST00000468807 DDX25Q9UHL0 483 aaKnown RBP24.55■■□□□ 1.52
TTC28-204ENST00000468807 KIAA1671Q9BY89 1806 aa24.55■■□□□ 1.52
TTC28-204ENST00000468807 CYP3A7-CYP3A51PA0A087WV96 503 aa24.54■■□□□ 1.52
TTC28-204ENST00000468807 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.54■■□□□ 1.52
TTC28-204ENST00000468807 PFKFB2O60825 505 aa24.54■■□□□ 1.52
TTC28-204ENST00000468807 GPR32O75388 356 aa24.54■■□□□ 1.52
TTC28-204ENST00000468807 PSMD10O75832 226 aa24.54■■□□□ 1.52
TTC28-204ENST00000468807 CYP3A7P24462 503 aa24.54■■□□□ 1.52
TTC28-204ENST00000468807 AK2P54819 239 aa24.54■■□□□ 1.52
TTC28-204ENST00000468807 NLRP11P59045 1033 aaKnown RBP24.54■■□□□ 1.52
TTC28-204ENST00000468807 ANAPC15P60006 121 aa24.54■■□□□ 1.52
TTC28-204ENST00000468807 ANKRD1Q15327 319 aa24.54■■□□□ 1.52
TTC28-204ENST00000468807 ERICH6BQ5W0A0 696 aa24.54■■□□□ 1.52
TTC28-204ENST00000468807 FAM228AQ86W67 206 aa24.54■■□□□ 1.52
TTC28-204ENST00000468807 CRIPAKQ8N1N5 446 aa24.54■■□□□ 1.52
TTC28-204ENST00000468807 ZNF668Q96K58 619 aaPredicted RBP24.54■■□□□ 1.52
TTC28-204ENST00000468807 PHF20Q9BVI0 1012 aa24.54■■□□□ 1.52
TTC28-204ENST00000468807 ALG13Q9NP73 1137 aaKnown RBP24.54■■□□□ 1.52
TTC28-204ENST00000468807 C1orf112Q9NSG2 853 aa24.54■■□□□ 1.52
TTC28-204ENST00000468807 SEPT9Q9UHD8 586 aaPredicted RBP24.54■■□□□ 1.52
TTC28-204ENST00000468807 ATG2AQ2TAZ0 1938 aa24.54■■□□□ 1.52
TTC28-204ENST00000468807 TBC1D8BQ0IIM8 1120 aa24.53■■□□□ 1.52
TTC28-204ENST00000468807 MTERF2Q49AM1 385 aa24.53■■□□□ 1.52
TTC28-204ENST00000468807 SPOUT1Q5T280 376 aaKnown RBP24.53■■□□□ 1.52
TTC28-204ENST00000468807 PLVAPQ9BX97 442 aa24.53■■□□□ 1.52
TTC28-204ENST00000468807 LMAN2LQ9H0V9 348 aa24.53■■□□□ 1.52
TTC28-204ENST00000468807 RGS18Q9NS28 235 aa24.53■■□□□ 1.52
TTC28-204ENST00000468807 GJB4Q9NTQ9 266 aa24.53■■□□□ 1.52
TTC28-204ENST00000468807 STK36Q9NRP7 1315 aa24.53■■□□□ 1.52
TTC28-204ENST00000468807 H3BQ06 376 aaPredicted RBP24.52■■□□□ 1.52
TTC28-204ENST00000468807 SLC37A4O43826 429 aa24.52■■□□□ 1.52
TTC28-204ENST00000468807 LEXMQ3ZCV2 418 aa24.52■■□□□ 1.52
TTC28-204ENST00000468807 MOXD1Q6UVY6 613 aa24.52■■□□□ 1.52
TTC28-204ENST00000468807 SLC24A5Q71RS6 500 aa24.52■■□□□ 1.52
TTC28-204ENST00000468807 RDM1Q8NG50 284 aa24.52■■□□□ 1.52
TTC28-204ENST00000468807 ETNPPLQ8TBG4 499 aa24.52■■□□□ 1.52
TTC28-204ENST00000468807 RNF216Q9NWF9 866 aaPredicted RBP24.52■■□□□ 1.52
TTC28-204ENST00000468807 CLDND1Q9NY35 253 aa24.52■■□□□ 1.52
TTC28-204ENST00000468807 ORC3Q9UBD5 711 aaPredicted RBP24.52■■□□□ 1.52
TTC28-204ENST00000468807 TBKBP1A7MCY6 615 aa24.51■■□□□ 1.51
TTC28-204ENST00000468807 PTCRAQ6ISU1 281 aaPredicted RBP24.51■■□□□ 1.51
TTC28-204ENST00000468807 NECAB1Q8N987 351 aa24.51■■□□□ 1.51
TTC28-204ENST00000468807 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.51■■□□□ 1.51
TTC28-204ENST00000468807 SH2D3AQ9BRG2 576 aa24.51■■□□□ 1.51
TTC28-204ENST00000468807 PLAGL2Q9UPG8 496 aa24.51■■□□□ 1.51
TTC28-204ENST00000468807 FNDC1Q4ZHG4 1894 aaPredicted RBP24.5■■□□□ 1.51
TTC28-204ENST00000468807 TMEM150BA6NC51 233 aa24.5■■□□□ 1.51
TTC28-204ENST00000468807 MARCH6O60337 910 aa24.5■■□□□ 1.51
TTC28-204ENST00000468807 FAM102BQ5T8I3 360 aa24.5■■□□□ 1.51
TTC28-204ENST00000468807 PIK3AP1Q6ZUJ8 805 aa24.5■■□□□ 1.51
TTC28-204ENST00000468807 NEK8Q86SG6 692 aa24.5■■□□□ 1.51
TTC28-204ENST00000468807 LINC01465Q8N7H1 131 aa24.5■■□□□ 1.51
TTC28-204ENST00000468807 KLHL23Q8NBE8 558 aa24.5■■□□□ 1.51
TTC28-204ENST00000468807 OXER1Q8TDS5 423 aa24.5■■□□□ 1.51
TTC28-204ENST00000468807 NLRP7Q8WX94 980 aa24.5■■□□□ 1.51
TTC28-204ENST00000468807 WASF1Q92558 559 aa24.5■■□□□ 1.51
TTC28-204ENST00000468807 PABPC5Q96DU9 382 aaKnown RBP24.5■■□□□ 1.51
TTC28-204ENST00000468807 MBOAT7Q96N66 472 aa24.5■■□□□ 1.51
TTC28-204ENST00000468807 DDX11L8A8MPP1 907 aa24.49■■□□□ 1.51
TTC28-204ENST00000468807 C9IYK1 514 aa24.49■■□□□ 1.51
TTC28-204ENST00000468807 CCNT1O60563 726 aaKnown RBP24.49■■□□□ 1.51
TTC28-204ENST00000468807 CTDNEP1O95476 244 aa24.49■■□□□ 1.51
TTC28-204ENST00000468807 MMP1P03956 469 aa24.49■■□□□ 1.51
TTC28-204ENST00000468807 XKR3Q5GH77 459 aa24.49■■□□□ 1.51
TTC28-204ENST00000468807 FAM43BQ6ZT52 329 aaPredicted RBP24.49■■□□□ 1.51
TTC28-204ENST00000468807 P2RX5Q93086 422 aa24.49■■□□□ 1.51
TTC28-204ENST00000468807 ADAMTS10Q9H324 1103 aa24.49■■□□□ 1.51
TTC28-204ENST00000468807 IGFLR1Q9H665 355 aa24.49■■□□□ 1.51
TTC28-204ENST00000468807 ATP6V0A4Q9HBG4 840 aa24.49■■□□□ 1.51
TTC28-204ENST00000468807 ITGB1P05556 798 aa24.48■■□□□ 1.51
TTC28-204ENST00000468807 FGFR1P11362 822 aa24.48■■□□□ 1.51
TTC28-204ENST00000468807 IL9P15248 144 aa24.48■■□□□ 1.51
TTC28-204ENST00000468807 ZSCAN20P17040 1043 aaPredicted RBP24.48■■□□□ 1.51
TTC28-204ENST00000468807 EIF4BP23588 611 aaKnown RBP24.48■■□□□ 1.51
TTC28-204ENST00000468807 GPC3P51654 580 aa24.48■■□□□ 1.51
TTC28-204ENST00000468807 FGFR4P22455 802 aa24.47■■□□□ 1.51
TTC28-204ENST00000468807 HYAL1Q12794 435 aa24.47■■□□□ 1.51
TTC28-204ENST00000468807 DRP2Q13474 957 aa24.47■■□□□ 1.51
TTC28-204ENST00000468807 TARBP2Q15633 366 aaKnown RBP24.47■■□□□ 1.51
TTC28-204ENST00000468807 NAALADL2Q58DX5 795 aa24.47■■□□□ 1.51
TTC28-204ENST00000468807 B3GNT9Q6UX72 402 aa24.47■■□□□ 1.51
TTC28-204ENST00000468807 ZNF710Q8N1W2 664 aa24.47■■□□□ 1.51
TTC28-204ENST00000468807 RNF169Q8NCN4 708 aa24.47■■□□□ 1.51
TTC28-204ENST00000468807 NEK9Q8TD19 979 aa24.47■■□□□ 1.51
TTC28-204ENST00000468807 NIFKQ9BYG3 293 aaKnown RBP24.47■■□□□ 1.51
TTC28-204ENST00000468807 TMEM161AQ9NX61 479 aa24.47■■□□□ 1.51
TTC28-204ENST00000468807 PCDHB12Q9Y5F1 795 aa24.47■■□□□ 1.51
TTC28-204ENST00000468807 NCK2O43639 380 aa24.46■■□□□ 1.51
TTC28-204ENST00000468807 LARGE1O95461 756 aa24.46■■□□□ 1.51
TTC28-204ENST00000468807 GCFC2P16383 781 aaKnown RBP24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms