RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 STAT5BP51692 787 aa20.91■□□□□ 0.94
SMC4-209ENST00000468653 TBX2Q13207 712 aaPredicted RBP20.91■□□□□ 0.94
SMC4-209ENST00000468653 ADAM9Q13443 819 aa20.91■□□□□ 0.94
SMC4-209ENST00000468653 ARMCX5Q6P1M9 558 aa20.91■□□□□ 0.94
SMC4-209ENST00000468653 SPATA33Q96N06 139 aa20.91■□□□□ 0.94
SMC4-209ENST00000468653 AZI2Q9H6S1 392 aa20.91■□□□□ 0.94
SMC4-209ENST00000468653 ZFYVE28Q9HCC9 887 aa20.91■□□□□ 0.94
SMC4-209ENST00000468653 GPRC5CQ9NQ84 441 aa20.91■□□□□ 0.94
SMC4-209ENST00000468653 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.91■□□□□ 0.94
SMC4-209ENST00000468653 K7ENM7 598 aa20.9■□□□□ 0.94
SMC4-209ENST00000468653 CETN3O15182 167 aa20.9■□□□□ 0.94
SMC4-209ENST00000468653 DGAT1O75907 488 aa20.9■□□□□ 0.94
SMC4-209ENST00000468653 GNA14O95837 355 aa20.9■□□□□ 0.94
SMC4-209ENST00000468653 ATP4AP20648 1035 aa20.9■□□□□ 0.94
SMC4-209ENST00000468653 MTERF2Q49AM1 385 aa20.9■□□□□ 0.94
SMC4-209ENST00000468653 CCDC40Q4G0X9 1142 aa20.9■□□□□ 0.94
SMC4-209ENST00000468653 PPFIBP1Q86W92 1011 aa20.9■□□□□ 0.94
SMC4-209ENST00000468653 MAML3Q96JK9 1138 aa20.9■□□□□ 0.94
SMC4-209ENST00000468653 PCYT2Q99447 389 aa20.9■□□□□ 0.94
SMC4-209ENST00000468653 GPR20Q99678 358 aa20.9■□□□□ 0.94
SMC4-209ENST00000468653 NRBP2Q9NSY0 501 aa20.9■□□□□ 0.94
SMC4-209ENST00000468653 PLXNA1Q9UIW2 1896 aa20.9■□□□□ 0.94
SMC4-209ENST00000468653 MYH11P35749 1972 aa20.9■□□□□ 0.94
SMC4-209ENST00000468653 TLR2O60603 784 aa20.9■□□□□ 0.94
SMC4-209ENST00000468653 ECM2O94769 699 aaPredicted RBP20.9■□□□□ 0.94
SMC4-209ENST00000468653 NR2F2P24468 414 aa20.9■□□□□ 0.94
SMC4-209ENST00000468653 DNM2P50570 870 aa20.9■□□□□ 0.94
SMC4-209ENST00000468653 KCNA1Q09470 495 aa20.9■□□□□ 0.94
SMC4-209ENST00000468653 ALCAMQ13740 583 aa20.9■□□□□ 0.94
SMC4-209ENST00000468653 HSDL1Q3SXM5 330 aa20.9■□□□□ 0.94
SMC4-209ENST00000468653 MAMDC4Q6UXC1 1216 aa20.9■□□□□ 0.94
SMC4-209ENST00000468653 PAXIP1Q6ZW49 1069 aaPredicted RBP20.9■□□□□ 0.94
SMC4-209ENST00000468653 MCPH1Q8NEM0 835 aa20.9■□□□□ 0.94
SMC4-209ENST00000468653 AFAP1L1Q8TED9 768 aa20.9■□□□□ 0.94
SMC4-209ENST00000468653 KIFAP3Q92845 792 aa20.9■□□□□ 0.94
SMC4-209ENST00000468653 COPS5Q92905 334 aa20.9■□□□□ 0.94
SMC4-209ENST00000468653 ATP6V0A4Q9HBG4 840 aa20.9■□□□□ 0.94
SMC4-209ENST00000468653 RRAGDQ9NQL2 400 aaPredicted RBP20.9■□□□□ 0.94
SMC4-209ENST00000468653 PYCARDQ9ULZ3 195 aa20.9■□□□□ 0.94
SMC4-209ENST00000468653 MYH9P35579 1960 aaKnown RBP20.9■□□□□ 0.94
SMC4-209ENST00000468653 NRDCO43847 1150 aa20.89■□□□□ 0.93
SMC4-209ENST00000468653 RPL13P26373 211 aaKnown RBP20.89■□□□□ 0.93
SMC4-209ENST00000468653 PEX3P56589 373 aa20.89■□□□□ 0.93
SMC4-209ENST00000468653 GRM1Q13255 1194 aa20.89■□□□□ 0.93
SMC4-209ENST00000468653 TAPT1Q6NXT6 567 aa20.89■□□□□ 0.93
SMC4-209ENST00000468653 KSR1Q8IVT5 923 aa20.89■□□□□ 0.93
SMC4-209ENST00000468653 ZC3H3Q8IXZ2 948 aaKnown RBP20.89■□□□□ 0.93
SMC4-209ENST00000468653 GLG1Q92896 1179 aa20.89■□□□□ 0.93
SMC4-209ENST00000468653 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.89■□□□□ 0.933e-11■■■□□ 18.8
SMC4-209ENST00000468653 ITIH6Q6UXX5 1313 aa20.89■□□□□ 0.93
SMC4-209ENST00000468653 SKILP12757 684 aa20.88■□□□□ 0.93
SMC4-209ENST00000468653 TBC1D8BQ0IIM8 1120 aa20.88■□□□□ 0.93
SMC4-209ENST00000468653 MAN2A1Q16706 1144 aa20.88■□□□□ 0.93
SMC4-209ENST00000468653 FKBP15Q5T1M5 1219 aa20.88■□□□□ 0.93
SMC4-209ENST00000468653 C17orf99Q6UX52 265 aa20.88■□□□□ 0.93
SMC4-209ENST00000468653 SLC17A8Q8NDX2 589 aa20.88■□□□□ 0.93
SMC4-209ENST00000468653 HHIPL1Q96JK4 782 aa20.88■□□□□ 0.93
SMC4-209ENST00000468653 SNAI1O95863 264 aaPredicted RBP20.87■□□□□ 0.93
SMC4-209ENST00000468653 NR3C1P04150 777 aa20.87■□□□□ 0.93
SMC4-209ENST00000468653 TPM1P09493 284 aa20.87■□□□□ 0.93
SMC4-209ENST00000468653 SMTNP53814 917 aa20.87■□□□□ 0.93
SMC4-209ENST00000468653 POLGP54098 1239 aaPredicted RBP20.87■□□□□ 0.93
SMC4-209ENST00000468653 DMP1Q13316 513 aaPredicted RBP20.87■□□□□ 0.93
SMC4-209ENST00000468653 VWA3BQ502W6 1294 aa20.87■□□□□ 0.93
SMC4-209ENST00000468653 MIIPQ5JXC2 388 aa20.87■□□□□ 0.93
SMC4-209ENST00000468653 HS2ST1Q7LGA3 356 aa20.87■□□□□ 0.93
SMC4-209ENST00000468653 SYCP3Q8IZU3 236 aa20.87■□□□□ 0.93
SMC4-209ENST00000468653 NPLOC4Q8TAT6 608 aa20.87■□□□□ 0.93
SMC4-209ENST00000468653 STRA6Q9BX79 667 aa20.87■□□□□ 0.93
SMC4-209ENST00000468653 NIFKQ9BYG3 293 aaKnown RBP20.87■□□□□ 0.93
SMC4-209ENST00000468653 PDLIM7Q9NR12 457 aa20.87■□□□□ 0.93
SMC4-209ENST00000468653 ZMYM2Q9UBW7 1377 aa20.87■□□□□ 0.93
SMC4-209ENST00000468653 A0A1W2PQC6 194 aa20.87■□□□□ 0.93
SMC4-209ENST00000468653 RBM47A0AV96 593 aaKnown RBP20.87■□□□□ 0.93
SMC4-209ENST00000468653 LGR5O75473 907 aa20.87■□□□□ 0.93
SMC4-209ENST00000468653 PPP1R37O75864 691 aa20.87■□□□□ 0.93
SMC4-209ENST00000468653 GOLGA8FQ08AF8 430 aa20.87■□□□□ 0.93
SMC4-209ENST00000468653 GOLGA8DPQ0D2H9 430 aa20.87■□□□□ 0.93
SMC4-209ENST00000468653 MAP2K5Q13163 448 aa20.87■□□□□ 0.93
SMC4-209ENST00000468653 TMEM63BQ5T3F8 832 aa20.87■□□□□ 0.93
SMC4-209ENST00000468653 HAUS6Q7Z4H7 955 aa20.87■□□□□ 0.93
SMC4-209ENST00000468653 FAM167AQ96KS9 214 aa20.87■□□□□ 0.93
SMC4-209ENST00000468653 TINF2Q9BSI4 451 aa20.87■□□□□ 0.93
SMC4-209ENST00000468653 GBP3Q9H0R5 595 aa20.87■□□□□ 0.93
SMC4-209ENST00000468653 C17orf75Q9HAS0 396 aa20.87■□□□□ 0.93
SMC4-209ENST00000468653 CCDC169A6NNP5 214 aa20.86■□□□□ 0.93
SMC4-209ENST00000468653 AKR1B15C9JRZ8 316 aaPredicted RBP20.86■□□□□ 0.93
SMC4-209ENST00000468653 CLIC2O15247 247 aa20.86■□□□□ 0.93
SMC4-209ENST00000468653 SLC16A4O15374 487 aa20.86■□□□□ 0.93
SMC4-209ENST00000468653 TGFB1I1O43294 461 aa20.86■□□□□ 0.93
SMC4-209ENST00000468653 ZNF500O60304 480 aaPredicted RBP20.86■□□□□ 0.93
SMC4-209ENST00000468653 GH1P01241 217 aa20.86■□□□□ 0.93
SMC4-209ENST00000468653 CCZ1BP86790 482 aa20.86■□□□□ 0.93
SMC4-209ENST00000468653 CCZ1P86791 482 aaPredicted RBP20.86■□□□□ 0.93
SMC4-209ENST00000468653 LAMC2Q13753 1193 aa20.86■□□□□ 0.93
SMC4-209ENST00000468653 MORN1Q5T089 497 aa20.86■□□□□ 0.93
SMC4-209ENST00000468653 GOLGA5Q8TBA6 731 aa20.86■□□□□ 0.93
SMC4-209ENST00000468653 KIAA1524Q8TCG1 905 aa20.86■□□□□ 0.93
SMC4-209ENST00000468653 CPLX3Q8WVH0 158 aa20.86■□□□□ 0.93
SMC4-209ENST00000468653 ACCSQ96QU6 501 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms