RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 FKBP3Q00688 224 aaKnown RBP22.71■■□□□ 1.23
TMEM53-207ENST00000468117 KSR1Q8IVT5 923 aa22.71■■□□□ 1.23
TMEM53-207ENST00000468117 DRC1Q96MC2 740 aa22.71■■□□□ 1.23
TMEM53-207ENST00000468117 SPATA33Q96N06 139 aa22.71■■□□□ 1.23
TMEM53-207ENST00000468117 TUBGCP2Q9BSJ2 902 aa22.71■■□□□ 1.23
TMEM53-207ENST00000468117 TIPINQ9BVW5 301 aa22.71■■□□□ 1.23
TMEM53-207ENST00000468117 KATNBL1Q9H079 304 aa22.71■■□□□ 1.23
TMEM53-207ENST00000468117 CENPFP49454 3210 aa22.71■■□□□ 1.23
TMEM53-207ENST00000468117 FGFR1OPO95684 399 aaKnown RBP22.7■■□□□ 1.23
TMEM53-207ENST00000468117 PRKCSHP14314 528 aaPredicted RBP22.7■■□□□ 1.23
TMEM53-207ENST00000468117 STAT5BP51692 787 aa22.7■■□□□ 1.23
TMEM53-207ENST00000468117 MTERF2Q49AM1 385 aa22.7■■□□□ 1.23
TMEM53-207ENST00000468117 GJC2Q5T442 439 aaPredicted RBP22.7■■□□□ 1.23
TMEM53-207ENST00000468117 SPECC1LQ69YQ0 1117 aa22.7■■□□□ 1.23
TMEM53-207ENST00000468117 PLS3P13797 630 aa22.7■■□□□ 1.22
TMEM53-207ENST00000468117 MTIF2P46199 727 aaKnown RBP22.7■■□□□ 1.22
TMEM53-207ENST00000468117 TM4SF4P48230 202 aa22.7■■□□□ 1.22
TMEM53-207ENST00000468117 SOX10P56693 466 aa22.7■■□□□ 1.22
TMEM53-207ENST00000468117 MORN1Q5T089 497 aa22.7■■□□□ 1.22
TMEM53-207ENST00000468117 FAM160B1Q5W0V3 765 aa22.7■■□□□ 1.22
TMEM53-207ENST00000468117 TINF2Q9BSI4 451 aa22.7■■□□□ 1.22
TMEM53-207ENST00000468117 IKZF4Q9H2S9 585 aa22.7■■□□□ 1.22
TMEM53-207ENST00000468117 PES1O00541 588 aaKnown RBP22.69■■□□□ 1.22
TMEM53-207ENST00000468117 PBX1P40424 430 aa22.69■■□□□ 1.22
TMEM53-207ENST00000468117 PPP4R3CPQ6ZMV5 832 aa22.69■■□□□ 1.22
TMEM53-207ENST00000468117 LRRC8AQ8IWT6 810 aa22.69■■□□□ 1.22
TMEM53-207ENST00000468117 AFAP1L1Q8TED9 768 aa22.69■■□□□ 1.22
TMEM53-207ENST00000468117 TRAF3IP3Q9Y228 551 aa22.69■■□□□ 1.22
TMEM53-207ENST00000468117 ZMYM2Q9UBW7 1377 aa22.69■■□□□ 1.22
TMEM53-207ENST00000468117 MGAMO43451 1857 aa22.69■■□□□ 1.22
TMEM53-207ENST00000468117 K7ENM7 598 aa22.69■■□□□ 1.22
TMEM53-207ENST00000468117 PDXKO00764 312 aa22.69■■□□□ 1.22
TMEM53-207ENST00000468117 DGAT1O75907 488 aa22.69■■□□□ 1.22
TMEM53-207ENST00000468117 MSNP26038 577 aaKnown RBP22.69■■□□□ 1.22
TMEM53-207ENST00000468117 ADCYAP1R1P41586 468 aa22.69■■□□□ 1.22
TMEM53-207ENST00000468117 GSDMDP57764 484 aa22.69■■□□□ 1.22
TMEM53-207ENST00000468117 EDRF1Q3B7T1 1238 aa22.69■■□□□ 1.22
TMEM53-207ENST00000468117 ARMCX5Q6P1M9 558 aa22.69■■□□□ 1.22
TMEM53-207ENST00000468117 TRIM50Q86XT4 487 aa22.69■■□□□ 1.22
TMEM53-207ENST00000468117 AZI2Q9H6S1 392 aa22.69■■□□□ 1.22
TMEM53-207ENST00000468117 TYW1Q9NV66 732 aaKnown RBP22.69■■□□□ 1.22
TMEM53-207ENST00000468117 PEX3P56589 373 aa22.68■■□□□ 1.22
TMEM53-207ENST00000468117 UBXN1Q04323 297 aa22.68■■□□□ 1.22
TMEM53-207ENST00000468117 MAP2K5Q13163 448 aa22.68■■□□□ 1.22
TMEM53-207ENST00000468117 STXBP4Q6ZWJ1 553 aa22.68■■□□□ 1.22
TMEM53-207ENST00000468117 GLG1Q92896 1179 aa22.68■■□□□ 1.22
TMEM53-207ENST00000468117 XPNPEP1Q9NQW7 623 aa22.68■■□□□ 1.22
TMEM53-207ENST00000468117 PDLIM7Q9NR12 457 aa22.68■■□□□ 1.22
TMEM53-207ENST00000468117 SLC5A4Q9NY91 659 aa22.68■■□□□ 1.22
TMEM53-207ENST00000468117 PCDHB13Q9Y5F0 798 aa22.68■■□□□ 1.22
TMEM53-207ENST00000468117 RBM47A0AV96 593 aaKnown RBP22.67■■□□□ 1.22
TMEM53-207ENST00000468117 LGALS16A8MUM7 142 aa22.67■■□□□ 1.22
TMEM53-207ENST00000468117 PPP1R37O75864 691 aa22.67■■□□□ 1.22
TMEM53-207ENST00000468117 NR2F2P24468 414 aa22.67■■□□□ 1.22
TMEM53-207ENST00000468117 ARHGAP1Q07960 439 aa22.67■■□□□ 1.22
TMEM53-207ENST00000468117 ADAM9Q13443 819 aa22.67■■□□□ 1.22
TMEM53-207ENST00000468117 STRA6Q9BX79 667 aa22.67■■□□□ 1.22
TMEM53-207ENST00000468117 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.67■■□□□ 1.22
TMEM53-207ENST00000468117 TGFB1I1O43294 461 aa22.67■■□□□ 1.22
TMEM53-207ENST00000468117 CALUO43852 315 aaPredicted RBP22.67■■□□□ 1.22
TMEM53-207ENST00000468117 TBX2Q13207 712 aaPredicted RBP22.67■■□□□ 1.22
TMEM53-207ENST00000468117 CEP63Q96MT8 703 aa22.67■■□□□ 1.22
TMEM53-207ENST00000468117 NOC4LQ9BVI4 516 aaKnown RBP22.67■■□□□ 1.22
TMEM53-207ENST00000468117 NIFKQ9BYG3 293 aaKnown RBP22.67■■□□□ 1.22
TMEM53-207ENST00000468117 ATP6V0A4Q9HBG4 840 aa22.67■■□□□ 1.22
TMEM53-207ENST00000468117 UBE4BO95155 1302 aa22.67■■□□□ 1.22
TMEM53-207ENST00000468117 LGR5O75473 907 aa22.66■■□□□ 1.22
TMEM53-207ENST00000468117 MARK3P27448 753 aa22.66■■□□□ 1.22
TMEM53-207ENST00000468117 POLGP54098 1239 aaPredicted RBP22.66■■□□□ 1.22
TMEM53-207ENST00000468117 GOLGA8FQ08AF8 430 aa22.66■■□□□ 1.22
TMEM53-207ENST00000468117 GOLGA8DPQ0D2H9 430 aa22.66■■□□□ 1.22
TMEM53-207ENST00000468117 MIIPQ5JXC2 388 aa22.66■■□□□ 1.22
TMEM53-207ENST00000468117 ZC3H3Q8IXZ2 948 aaKnown RBP22.66■■□□□ 1.22
TMEM53-207ENST00000468117 MCPH1Q8NEM0 835 aa22.66■■□□□ 1.22
TMEM53-207ENST00000468117 KIFAP3Q92845 792 aa22.66■■□□□ 1.22
TMEM53-207ENST00000468117 ABHD16BQ9H3Z7 469 aa22.66■■□□□ 1.22
TMEM53-207ENST00000468117 CLIC2O15247 247 aa22.65■■□□□ 1.22
TMEM53-207ENST00000468117 CA12O43570 354 aa22.65■■□□□ 1.22
TMEM53-207ENST00000468117 TPM2P07951 284 aa22.65■■□□□ 1.22
TMEM53-207ENST00000468117 MAPTP10636 758 aaKnown RBP22.65■■□□□ 1.22
TMEM53-207ENST00000468117 ACVR2BQ13705 512 aa22.65■■□□□ 1.22
TMEM53-207ENST00000468117 CEP135Q66GS9 1140 aa22.65■■□□□ 1.22
TMEM53-207ENST00000468117 BSNDQ8WZ55 320 aa22.65■■□□□ 1.22
TMEM53-207ENST00000468117 NRBP2Q9NSY0 501 aa22.65■■□□□ 1.22
TMEM53-207ENST00000468117 ZHX1Q9UKY1 873 aaPredicted RBP22.65■■□□□ 1.22
TMEM53-207ENST00000468117 ZSWIM8A7E2V4 1837 aa22.65■■□□□ 1.22
TMEM53-207ENST00000468117 CETN3O15182 167 aa22.65■■□□□ 1.22
TMEM53-207ENST00000468117 SLC16A4O15374 487 aa22.65■■□□□ 1.22
TMEM53-207ENST00000468117 GH1P01241 217 aa22.65■■□□□ 1.22
TMEM53-207ENST00000468117 SFPQP23246 707 aaKnown RBP eCLIP22.65■■□□□ 1.22
TMEM53-207ENST00000468117 LAMC2Q13753 1193 aa22.65■■□□□ 1.22
TMEM53-207ENST00000468117 EMC2Q15006 297 aa22.65■■□□□ 1.22
TMEM53-207ENST00000468117 CCDC40Q4G0X9 1142 aa22.65■■□□□ 1.22
TMEM53-207ENST00000468117 HAUS6Q7Z4H7 955 aa22.65■■□□□ 1.22
TMEM53-207ENST00000468117 CCDC150Q8NCX0 1101 aa22.65■■□□□ 1.22
TMEM53-207ENST00000468117 CEP89Q96ST8 783 aa22.65■■□□□ 1.22
TMEM53-207ENST00000468117 FLRT1Q9NZU1 646 aa22.65■■□□□ 1.22
TMEM53-207ENST00000468117 PYCARDQ9ULZ3 195 aa22.65■■□□□ 1.22
TMEM53-207ENST00000468117 CCDC169A6NNP5 214 aa22.64■■□□□ 1.22
TMEM53-207ENST00000468117 NR3C1P04150 777 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms