RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 DNAJC10Q8IXB1 793 aa9.97□□□□□ -0.81
LCA5-203ENST00000467898 NUP93Q8N1F7 819 aa9.97□□□□□ -0.81
LCA5-203ENST00000467898 DCLK2Q8N568 766 aa9.97□□□□□ -0.81
LCA5-203ENST00000467898 GOLM1Q8NBJ4 401 aa9.97□□□□□ -0.81
LCA5-203ENST00000467898 GPATCH3Q96I76 525 aa9.97□□□□□ -0.81
LCA5-203ENST00000467898 ZBTB3Q9H5J0 574 aa9.97□□□□□ -0.81
LCA5-203ENST00000467898 TSKSQ9UJT2 592 aa9.97□□□□□ -0.81
LCA5-203ENST00000467898 DBNLQ9UJU6 430 aaKnown RBP9.97□□□□□ -0.81
LCA5-203ENST00000467898 HBS1LQ9Y450 684 aaKnown RBP9.97□□□□□ -0.81
LCA5-203ENST00000467898 ZNF711Q9Y462 761 aa9.97□□□□□ -0.81
LCA5-203ENST00000467898 EIF4E1BA6NMX2 242 aaKnown RBP9.96□□□□□ -0.81
LCA5-203ENST00000467898 FAM47E-STBD1D6RA91 191 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 GCOM1H8Y6P7 765 aaPredicted RBP9.96□□□□□ -0.81
LCA5-203ENST00000467898 O00370 1275 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 APOEP02649 317 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 MYZAPP0CAP1 466 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 CCNFP41002 786 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 GPC3P51654 580 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 TRIM29Q14134 588 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 PLS1Q14651 629 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 TNNI3KQ59H18 835 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 WASHC2DQ5SRD0 308 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 CCDC174Q6PII3 467 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 LMBR1LQ6UX01 489 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 Q6ZNX1 250 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 MARK2Q7KZI7 788 aaKnown RBP9.96□□□□□ -0.81
LCA5-203ENST00000467898 ATG9AQ7Z3C6 839 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 PALB2Q86YC2 1186 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 CCNJLQ8IV13 435 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 VMP1Q96GC9 406 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 KLHL4Q9C0H6 718 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 TUBE1Q9UJT0 475 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 FPGT-TNNI3KV9GXZ4 949 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 NEDD4P46934 1319 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 NUP98P52948 1817 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 SIGLEC16A6NMB1 481 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 E9PBE3 544 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 KMOO15229 486 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 SPTLC1O15269 473 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 IDH3BO43837 385 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 LGR5O75473 907 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 LDHBP07195 334 aaKnown RBP9.96□□□□□ -0.81
LCA5-203ENST00000467898 CCNB1P14635 433 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 KRT4P19013 534 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 PTH1RQ03431 593 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 RELAQ04206 551 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 RCN2Q14257 317 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 MTF1Q14872 753 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 EAPPQ56P03 285 aaPredicted RBP9.96□□□□□ -0.81
LCA5-203ENST00000467898 VPS36Q86VN1 386 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 MCF2L2Q86YR7 1114 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 LURAP1LQ8IV03 231 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 BBS5Q8N3I7 341 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 CAGE1Q8TC20 777 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 PIGOQ8TEQ8 1089 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 DPF3Q92784 378 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 NSMCE3Q96MG7 304 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 CCDC43Q96MW1 224 aaKnown RBP9.96□□□□□ -0.81
LCA5-203ENST00000467898 XPO6Q96QU8 1125 aaKnown RBP9.96□□□□□ -0.81
LCA5-203ENST00000467898 FAM129AQ9BZQ8 928 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 PLCB1Q9NQ66 1216 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 SEC63Q9UGP8 760 aaKnown RBP9.96□□□□□ -0.81
LCA5-203ENST00000467898 AGAP1Q9UPQ3 857 aa9.96□□□□□ -0.81
LCA5-203ENST00000467898 FBP2O00757 339 aa9.96□□□□□ -0.82
LCA5-203ENST00000467898 SGTAO43765 313 aa9.96□□□□□ -0.82
LCA5-203ENST00000467898 PEX11AO75192 247 aa9.96□□□□□ -0.82
LCA5-203ENST00000467898 TFRCP02786 760 aaKnown RBP9.96□□□□□ -0.82
LCA5-203ENST00000467898 SERPINB3P29508 390 aa9.96□□□□□ -0.82
LCA5-203ENST00000467898 ETV3P41162 512 aa9.96□□□□□ -0.82
LCA5-203ENST00000467898 KIF11P52732 1056 aa9.96□□□□□ -0.82
LCA5-203ENST00000467898 EMP3P54852 163 aa9.96□□□□□ -0.82
LCA5-203ENST00000467898 BASP1P80723 227 aaKnown RBP9.96□□□□□ -0.82
LCA5-203ENST00000467898 NONOQ15233 471 aaKnown RBP eCLIP9.96□□□□□ -0.82
LCA5-203ENST00000467898 ERMARDQ5T6L9 678 aa9.96□□□□□ -0.82
LCA5-203ENST00000467898 ARHGAP27Q6ZUM4 889 aa9.96□□□□□ -0.82
LCA5-203ENST00000467898 KRT27Q7Z3Y8 459 aa9.96□□□□□ -0.82
LCA5-203ENST00000467898 PATL1Q86TB9 770 aaKnown RBP9.96□□□□□ -0.82
LCA5-203ENST00000467898 RHOT2Q8IXI1 618 aa9.96□□□□□ -0.82
LCA5-203ENST00000467898 ZBED8Q8IZ13 594 aa9.96□□□□□ -0.82
LCA5-203ENST00000467898 FBXO41Q8TF61 875 aa9.96□□□□□ -0.82
LCA5-203ENST00000467898 UCMAQ8WVF2 138 aa9.96□□□□□ -0.82
LCA5-203ENST00000467898 MED30Q96HR3 178 aa9.96□□□□□ -0.82
LCA5-203ENST00000467898 PBKQ96KB5 322 aa9.96□□□□□ -0.82
LCA5-203ENST00000467898 PPP1R12CQ9BZL4 782 aa9.96□□□□□ -0.82
LCA5-203ENST00000467898 CCDC134Q9H6E4 229 aa9.96□□□□□ -0.82
LCA5-203ENST00000467898 A0A088AWK7 358 aa9.95□□□□□ -0.82
LCA5-203ENST00000467898 ECE2O60344 883 aa9.95□□□□□ -0.82
LCA5-203ENST00000467898 ZMYND10O75800 440 aa9.95□□□□□ -0.82
LCA5-203ENST00000467898 SLIT2O94813 1529 aa9.95□□□□□ -0.82
LCA5-203ENST00000467898 TCIRG1Q13488 830 aa9.95□□□□□ -0.82
LCA5-203ENST00000467898 SHROOM1Q2M3G4 852 aaPredicted RBP9.95□□□□□ -0.82
LCA5-203ENST00000467898 WDR45BQ5MNZ6 344 aa9.95□□□□□ -0.82
LCA5-203ENST00000467898 TMCO4Q5TGY1 634 aa9.95□□□□□ -0.82
LCA5-203ENST00000467898 TWF2Q6IBS0 349 aaKnown RBP9.95□□□□□ -0.82
LCA5-203ENST00000467898 OLFM4Q6UX06 510 aa9.95□□□□□ -0.82
LCA5-203ENST00000467898 IFT20Q8IY31 132 aa9.95□□□□□ -0.82
LCA5-203ENST00000467898 CRACR2BQ8N4Y2 399 aaPredicted RBP9.95□□□□□ -0.82
LCA5-203ENST00000467898 C8orf48Q96LL4 319 aa9.95□□□□□ -0.82
LCA5-203ENST00000467898 CEP295NLQ96MC4 621 aa9.95□□□□□ -0.82
LCA5-203ENST00000467898 PIH1D3Q9NQM4 214 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms