RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 RGS18Q9NS28 235 aa23.84■■□□□ 1.41
COL9A3-207ENST00000467819 C1orf112Q9NSG2 853 aa23.84■■□□□ 1.41
COL9A3-207ENST00000467819 PRKAG3Q9UGI9 489 aa23.84■■□□□ 1.41
COL9A3-207ENST00000467819 WDR64B1ANS9 1081 aa23.83■■□□□ 1.41
COL9A3-207ENST00000467819 MBTPS2O43462 519 aa23.83■■□□□ 1.41
COL9A3-207ENST00000467819 GPR32O75388 356 aa23.83■■□□□ 1.41
COL9A3-207ENST00000467819 REC8O95072 547 aa23.83■■□□□ 1.41
COL9A3-207ENST00000467819 PDIA3P30101 505 aaKnown RBP23.83■■□□□ 1.41
COL9A3-207ENST00000467819 NDUFV1P49821 464 aa23.83■■□□□ 1.41
COL9A3-207ENST00000467819 FAM102BQ5T8I3 360 aa23.83■■□□□ 1.41
COL9A3-207ENST00000467819 SLC24A5Q71RS6 500 aa23.83■■□□□ 1.41
COL9A3-207ENST00000467819 ADHFE1Q8IWW8 467 aa23.83■■□□□ 1.41
COL9A3-207ENST00000467819 CEP131Q9UPN4 1083 aa23.83■■□□□ 1.41
COL9A3-207ENST00000467819 AKT3Q9Y243 479 aa23.83■■□□□ 1.41
COL9A3-207ENST00000467819 C9IYK1 514 aa23.82■■□□□ 1.4
COL9A3-207ENST00000467819 ALADP13716 330 aa23.82■■□□□ 1.4
COL9A3-207ENST00000467819 ADAM15Q13444 863 aa23.82■■□□□ 1.4
COL9A3-207ENST00000467819 FAM167AQ96KS9 214 aa23.82■■□□□ 1.4
COL9A3-207ENST00000467819 RNF216Q9NWF9 866 aaPredicted RBP23.82■■□□□ 1.4
COL9A3-207ENST00000467819 HCSTQ9UBK5 93 aa23.82■■□□□ 1.4
COL9A3-207ENST00000467819 CD207Q9UJ71 328 aa23.82■■□□□ 1.4
COL9A3-207ENST00000467819 PCDHGC5Q9Y5F6 944 aa23.82■■□□□ 1.4
COL9A3-207ENST00000467819 MSH4O15457 936 aa23.81■■□□□ 1.4
COL9A3-207ENST00000467819 MAGEB2O15479 319 aa23.81■■□□□ 1.4
COL9A3-207ENST00000467819 CHMP2AO43633 222 aa23.81■■□□□ 1.4
COL9A3-207ENST00000467819 EDIL3O43854 480 aa23.81■■□□□ 1.4
COL9A3-207ENST00000467819 NLRP5P59047 1200 aa23.81■■□□□ 1.4
COL9A3-207ENST00000467819 SMAD4Q13485 552 aaKnown RBP23.81■■□□□ 1.4
COL9A3-207ENST00000467819 SMAD2Q15796 467 aaKnown RBP23.81■■□□□ 1.4
COL9A3-207ENST00000467819 EFCAB12Q6NXP0 572 aa23.81■■□□□ 1.4
COL9A3-207ENST00000467819 RBM23Q86U06 439 aaKnown RBP23.81■■□□□ 1.4
COL9A3-207ENST00000467819 LRRC71Q8N4P6 559 aa23.81■■□□□ 1.4
COL9A3-207ENST00000467819 MAP7D2Q96T17 732 aa23.81■■□□□ 1.4
COL9A3-207ENST00000467819 DISC1Q9NRI5 854 aa23.81■■□□□ 1.4
COL9A3-207ENST00000467819 PCDHB12Q9Y5F1 795 aa23.81■■□□□ 1.4
COL9A3-207ENST00000467819 C19orf67A6NJJ6 358 aa23.8■■□□□ 1.4
COL9A3-207ENST00000467819 DCXO43602 365 aa23.8■■□□□ 1.4
COL9A3-207ENST00000467819 ZNF862O60290 1169 aa23.8■■□□□ 1.4
COL9A3-207ENST00000467819 GAS7O60861 476 aa23.8■■□□□ 1.4
COL9A3-207ENST00000467819 OATP04181 439 aa23.8■■□□□ 1.4
COL9A3-207ENST00000467819 FGFR1P11362 822 aa23.8■■□□□ 1.4
COL9A3-207ENST00000467819 NRIP1P48552 1158 aa23.8■■□□□ 1.4
COL9A3-207ENST00000467819 NLRP11P59045 1033 aaKnown RBP23.8■■□□□ 1.4
COL9A3-207ENST00000467819 PRKCEQ02156 737 aa23.8■■□□□ 1.4
COL9A3-207ENST00000467819 FAM43BQ6ZT52 329 aaPredicted RBP23.8■■□□□ 1.4
COL9A3-207ENST00000467819 GJA10Q969M2 543 aa23.8■■□□□ 1.4
COL9A3-207ENST00000467819 ZNF668Q96K58 619 aaPredicted RBP23.8■■□□□ 1.4
COL9A3-207ENST00000467819 ATP6V0A4Q9HBG4 840 aa23.8■■□□□ 1.4
COL9A3-207ENST00000467819 AAASQ9NRG9 546 aa23.8■■□□□ 1.4
COL9A3-207ENST00000467819 PRR33A8MZF0 331 aa23.79■■□□□ 1.4
COL9A3-207ENST00000467819 EVCP57679 992 aa23.79■■□□□ 1.4
COL9A3-207ENST00000467819 TOB2Q14106 344 aaPredicted RBP23.79■■□□□ 1.4
COL9A3-207ENST00000467819 DSC3Q14574 896 aa23.79■■□□□ 1.4
COL9A3-207ENST00000467819 UGCGQ16739 394 aa23.79■■□□□ 1.4
COL9A3-207ENST00000467819 LRCH2Q5VUJ6 765 aa23.79■■□□□ 1.4
COL9A3-207ENST00000467819 RUFY3Q7L099 469 aa23.79■■□□□ 1.4
COL9A3-207ENST00000467819 TRIM22Q8IYM9 498 aa23.79■■□□□ 1.4
COL9A3-207ENST00000467819 EFHBQ8N7U6 833 aa23.79■■□□□ 1.4
COL9A3-207ENST00000467819 TEKT3Q9BXF9 490 aa23.79■■□□□ 1.4
COL9A3-207ENST00000467819 UNC45AQ9H3U1 944 aa23.79■■□□□ 1.4
COL9A3-207ENST00000467819 SH3GLB2Q9NR46 395 aa23.79■■□□□ 1.4
COL9A3-207ENST00000467819 NRBP2Q9NSY0 501 aa23.79■■□□□ 1.4
COL9A3-207ENST00000467819 TYW1Q9NV66 732 aaKnown RBP23.79■■□□□ 1.4
COL9A3-207ENST00000467819 TMEM161AQ9NX61 479 aa23.79■■□□□ 1.4
COL9A3-207ENST00000467819 MUC6Q6W4X9 2439 aa23.79■■□□□ 1.4
COL9A3-207ENST00000467819 TMOD1P28289 359 aa23.78■■□□□ 1.4
COL9A3-207ENST00000467819 USP11P51784 963 aa23.78■■□□□ 1.4
COL9A3-207ENST00000467819 SSRP1Q08945 709 aaKnown RBP23.78■■□□□ 1.4
COL9A3-207ENST00000467819 CSPP1Q1MSJ5 1256 aa23.78■■□□□ 1.4
COL9A3-207ENST00000467819 THNSL1Q8IYQ7 743 aa23.78■■□□□ 1.4
COL9A3-207ENST00000467819 LINC01465Q8N7H1 131 aa23.78■■□□□ 1.4
COL9A3-207ENST00000467819 COLGALT1Q8NBJ5 622 aa23.78■■□□□ 1.4
COL9A3-207ENST00000467819 MICAL1Q8TDZ2 1067 aa23.78■■□□□ 1.4
COL9A3-207ENST00000467819 TBCKQ8TEA7 893 aa23.78■■□□□ 1.4
COL9A3-207ENST00000467819 SLC5A5Q92911 643 aa23.78■■□□□ 1.4
COL9A3-207ENST00000467819 RIT2Q99578 217 aa23.78■■□□□ 1.4
COL9A3-207ENST00000467819 LARP6Q9BRS8 491 aaKnown RBP23.78■■□□□ 1.4
COL9A3-207ENST00000467819 FGF18O76093 207 aa23.77■■□□□ 1.4
COL9A3-207ENST00000467819 JAK3P52333 1124 aa23.77■■□□□ 1.4
COL9A3-207ENST00000467819 MSLNLQ96KJ4 702 aa23.77■■□□□ 1.4
COL9A3-207ENST00000467819 SCLT1Q96NL6 688 aa23.77■■□□□ 1.4
COL9A3-207ENST00000467819 POP1Q99575 1024 aaKnown RBP23.77■■□□□ 1.4
COL9A3-207ENST00000467819 ADAMTS10Q9H324 1103 aa23.77■■□□□ 1.4
COL9A3-207ENST00000467819 ZSWIM6Q9HCJ5 1215 aa23.77■■□□□ 1.4
COL9A3-207ENST00000467819 TLR9Q9NR96 1032 aa23.77■■□□□ 1.4
COL9A3-207ENST00000467819 CLEC1BQ9P126 229 aa23.77■■□□□ 1.4
COL9A3-207ENST00000467819 CPLX1O14810 134 aa23.76■■□□□ 1.39
COL9A3-207ENST00000467819 GLP2RO95838 553 aa23.76■■□□□ 1.39
COL9A3-207ENST00000467819 SFNP31947 248 aa23.76■■□□□ 1.39
COL9A3-207ENST00000467819 FAM189BP81408 668 aa23.76■■□□□ 1.39
COL9A3-207ENST00000467819 UBE3AQ05086 875 aa23.76■■□□□ 1.39
COL9A3-207ENST00000467819 UPF3BQ9BZI7 483 aaKnown RBP23.76■■□□□ 1.39
COL9A3-207ENST00000467819 CWH43Q9H720 699 aa23.76■■□□□ 1.39
COL9A3-207ENST00000467819 ELAC1Q9H777 363 aaKnown RBP23.76■■□□□ 1.39
COL9A3-207ENST00000467819 TLE6Q9H808 572 aa23.76■■□□□ 1.39
COL9A3-207ENST00000467819 BARX2Q9UMQ3 279 aaPredicted RBP23.76■■□□□ 1.39
COL9A3-207ENST00000467819 PCDHA4Q9UN74 947 aa23.76■■□□□ 1.39
COL9A3-207ENST00000467819 ARIH1Q9Y4X5 557 aaPredicted RBP23.76■■□□□ 1.39
COL9A3-207ENST00000467819 CYP46A1Q9Y6A2 500 aa23.76■■□□□ 1.39
COL9A3-207ENST00000467819 TRIOO75962 3097 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms