RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 SEL1LQ9UBV2 794 aa12.52□□□□□ -0.4
HPS1-208ENST00000467246 AJAP1Q9UKB5 411 aaPredicted RBP12.52□□□□□ -0.4
HPS1-208ENST00000467246 CTDP1Q9Y5B0 961 aaPredicted RBP12.52□□□□□ -0.4
HPS1-208ENST00000467246 TMEM150BA6NC51 233 aa12.52□□□□□ -0.41
HPS1-208ENST00000467246 FZD9O00144 591 aa12.52□□□□□ -0.41
HPS1-208ENST00000467246 VWA5AO00534 786 aa12.52□□□□□ -0.41
HPS1-208ENST00000467246 ATP9AO75110 1047 aa12.52□□□□□ -0.41
HPS1-208ENST00000467246 TUBB4BP68371 445 aa12.52□□□□□ -0.41
HPS1-208ENST00000467246 PGM5Q15124 567 aa12.52□□□□□ -0.41
HPS1-208ENST00000467246 GJB7Q6PEY0 223 aa12.52□□□□□ -0.41
HPS1-208ENST00000467246 NIPA1Q7RTP0 329 aa12.52□□□□□ -0.41
HPS1-208ENST00000467246 IRF2BP2Q7Z5L9 587 aa12.52□□□□□ -0.41
HPS1-208ENST00000467246 FAM186BQ8IYM0 893 aa12.52□□□□□ -0.41
HPS1-208ENST00000467246 RBM46Q8TBY0 533 aaKnown RBP12.52□□□□□ -0.41
HPS1-208ENST00000467246 RMDN3Q96TC7 470 aa12.52□□□□□ -0.41
HPS1-208ENST00000467246 SIX2Q9NPC8 291 aa12.52□□□□□ -0.41
HPS1-208ENST00000467246 POTEB2H3BUK9 544 aa12.52□□□□□ -0.41
HPS1-208ENST00000467246 ZBED4O75132 1171 aa12.52□□□□□ -0.41
HPS1-208ENST00000467246 PSMC2P35998 433 aaKnown RBP12.52□□□□□ -0.41
HPS1-208ENST00000467246 CYP2J2P51589 502 aa12.52□□□□□ -0.41
HPS1-208ENST00000467246 PTK2Q05397 1052 aa12.52□□□□□ -0.41
HPS1-208ENST00000467246 SLC18A3Q16572 532 aa12.52□□□□□ -0.41
HPS1-208ENST00000467246 GBP6Q6ZN66 633 aa12.52□□□□□ -0.41
HPS1-208ENST00000467246 SPAG5Q96R06 1193 aa12.52□□□□□ -0.41
HPS1-208ENST00000467246 PSMB7Q99436 277 aa12.52□□□□□ -0.41
HPS1-208ENST00000467246 PACSIN1Q9BY11 444 aa12.52□□□□□ -0.41
HPS1-208ENST00000467246 AGPAT3Q9NRZ7 376 aa12.52□□□□□ -0.41
HPS1-208ENST00000467246 GCNT4Q9P109 453 aa12.52□□□□□ -0.41
HPS1-208ENST00000467246 SNX12Q9UMY4 172 aa12.52□□□□□ -0.41
HPS1-208ENST00000467246 MYH10P35580 1976 aa12.51□□□□□ -0.41
HPS1-208ENST00000467246 POLR3GO15318 223 aaPredicted RBP12.51□□□□□ -0.41
HPS1-208ENST00000467246 ATP8B1O43520 1251 aa12.51□□□□□ -0.41
HPS1-208ENST00000467246 NCK2O43639 380 aa12.51□□□□□ -0.41
HPS1-208ENST00000467246 BACE1P56817 501 aa12.51□□□□□ -0.41
HPS1-208ENST00000467246 ANGEL2Q5VTE6 544 aaKnown RBP12.51□□□□□ -0.41
HPS1-208ENST00000467246 RNF207Q6ZRF8 634 aa12.51□□□□□ -0.41
HPS1-208ENST00000467246 NEK9Q8TD19 979 aa12.51□□□□□ -0.41
HPS1-208ENST00000467246 COG1Q8WTW3 980 aa12.51□□□□□ -0.41
HPS1-208ENST00000467246 WRNIP1Q96S55 665 aa12.51□□□□□ -0.41
HPS1-208ENST00000467246 PDCD2LQ9BRP1 358 aa12.51□□□□□ -0.41
HPS1-208ENST00000467246 GBP3Q9H0R5 595 aa12.51□□□□□ -0.41
HPS1-208ENST00000467246 SUGCTQ9HAC7 445 aa12.51□□□□□ -0.41
HPS1-208ENST00000467246 ABCB6Q9NP58 842 aa12.51□□□□□ -0.41
HPS1-208ENST00000467246 GINM1Q9NU53 330 aa12.51□□□□□ -0.41
HPS1-208ENST00000467246 ZNF541Q9H0D2 1346 aa12.51□□□□□ -0.41
HPS1-208ENST00000467246 CXCR5P32302 372 aa12.51□□□□□ -0.41
HPS1-208ENST00000467246 QARSP47897 775 aaKnown RBP12.51□□□□□ -0.41
HPS1-208ENST00000467246 RARRES1P49788 294 aa12.51□□□□□ -0.41
HPS1-208ENST00000467246 USP14P54578 494 aa12.51□□□□□ -0.41
HPS1-208ENST00000467246 NAP1L1P55209 391 aaKnown RBP12.51□□□□□ -0.41
HPS1-208ENST00000467246 UGCGQ16739 394 aa12.51□□□□□ -0.41
HPS1-208ENST00000467246 BEND6Q5SZJ8 279 aaPredicted RBP12.51□□□□□ -0.41
HPS1-208ENST00000467246 NFRKBQ6P4R8 1299 aa12.51□□□□□ -0.41
HPS1-208ENST00000467246 HS2ST1Q7LGA3 356 aa12.51□□□□□ -0.41
HPS1-208ENST00000467246 ZNF571Q7Z3V5 609 aaPredicted RBP12.51□□□□□ -0.41
HPS1-208ENST00000467246 CREG2Q8IUH2 290 aa12.51□□□□□ -0.41
HPS1-208ENST00000467246 SCYL3Q8IZE3 742 aa12.51□□□□□ -0.41
HPS1-208ENST00000467246 CAGE1Q8TC20 777 aa12.51□□□□□ -0.41
HPS1-208ENST00000467246 STRA6Q9BX79 667 aa12.51□□□□□ -0.41
HPS1-208ENST00000467246 PXMP2Q9NR77 195 aa12.51□□□□□ -0.41
HPS1-208ENST00000467246 BRCA1P38398 1863 aaKnown RBP12.5□□□□□ -0.41
HPS1-208ENST00000467246 TISP43B9A030 160 aa12.5□□□□□ -0.41
HPS1-208ENST00000467246 PPP1R37O75864 691 aa12.5□□□□□ -0.41
HPS1-208ENST00000467246 PTPRAP18433 802 aa12.5□□□□□ -0.41
HPS1-208ENST00000467246 KLRC1P26715 233 aa12.5□□□□□ -0.41
HPS1-208ENST00000467246 BAATQ14032 418 aaPredicted RBP12.5□□□□□ -0.41
HPS1-208ENST00000467246 NFIL3Q16649 462 aa12.5□□□□□ -0.41
HPS1-208ENST00000467246 DNAAF5Q86Y56 855 aa12.5□□□□□ -0.41
HPS1-208ENST00000467246 RDH13Q8NBN7 331 aa12.5□□□□□ -0.41
HPS1-208ENST00000467246 ZNF280CQ8ND82 737 aa12.5□□□□□ -0.41
HPS1-208ENST00000467246 HNRNPLLQ8WVV9 542 aaKnown RBP12.5□□□□□ -0.41
HPS1-208ENST00000467246 NOX5Q96PH1 765 aa12.5□□□□□ -0.41
HPS1-208ENST00000467246 ALS2CR12Q96Q35 445 aa12.5□□□□□ -0.41
HPS1-208ENST00000467246 ZCCHC17Q9NP64 241 aaKnown RBP12.5□□□□□ -0.41
HPS1-208ENST00000467246 DMAC2Q9NW81 257 aa12.5□□□□□ -0.41
HPS1-208ENST00000467246 TESPA1A2RU30 521 aaPredicted RBP12.5□□□□□ -0.41
HPS1-208ENST00000467246 CCNE2O96020 404 aa12.5□□□□□ -0.41
HPS1-208ENST00000467246 TRIM49P0CI25 452 aa12.5□□□□□ -0.41
HPS1-208ENST00000467246 TRIM49CP0CI26 452 aa12.5□□□□□ -0.41
HPS1-208ENST00000467246 HMGCS2P54868 508 aa12.5□□□□□ -0.41
HPS1-208ENST00000467246 CKAP4Q07065 602 aaKnown RBP12.5□□□□□ -0.41
HPS1-208ENST00000467246 KIAA0753Q2KHM9 967 aa12.5□□□□□ -0.41
HPS1-208ENST00000467246 ARHGEF16Q5VV41 709 aa12.5□□□□□ -0.41
HPS1-208ENST00000467246 STXBP4Q6ZWJ1 553 aa12.5□□□□□ -0.41
HPS1-208ENST00000467246 SYCP3Q8IZU3 236 aa12.5□□□□□ -0.41
HPS1-208ENST00000467246 RNF146Q9NTX7 359 aa12.5□□□□□ -0.41
HPS1-208ENST00000467246 TBC1D22BQ9NU19 505 aa12.5□□□□□ -0.41
HPS1-208ENST00000467246 MAP3K20Q9NYL2 800 aaKnown RBP12.5□□□□□ -0.41
HPS1-208ENST00000467246 K7ENM7 598 aa12.49□□□□□ -0.41
HPS1-208ENST00000467246 YWHABP31946 246 aaKnown RBP12.49□□□□□ -0.41
HPS1-208ENST00000467246 CBWD6Q4V339 395 aa12.49□□□□□ -0.41
HPS1-208ENST00000467246 CBWD3Q5JTY5 395 aa12.49□□□□□ -0.41
HPS1-208ENST00000467246 CBWD5Q5RIA9 395 aa12.49□□□□□ -0.41
HPS1-208ENST00000467246 DCAF15Q66K64 600 aa12.49□□□□□ -0.41
HPS1-208ENST00000467246 OSBPL9Q96SU4 736 aa12.49□□□□□ -0.41
HPS1-208ENST00000467246 TLR10Q9BXR5 811 aa12.49□□□□□ -0.41
HPS1-208ENST00000467246 PICK1Q9NRD5 415 aa12.49□□□□□ -0.41
HPS1-208ENST00000467246 SMARCAL1Q9NZC9 954 aa12.49□□□□□ -0.41
HPS1-208ENST00000467246 ZNF112Q9UJU3 913 aa12.49□□□□□ -0.41
HPS1-208ENST00000467246 UBE4BO95155 1302 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms