RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 NTRK3Q16288 839 aa6.33□□□□□ -1.4
XRN1-206ENST00000467077 HECTD2Q5U5R9 776 aa6.33□□□□□ -1.4
XRN1-206ENST00000467077 RHOUQ7L0Q8 258 aa6.33□□□□□ -1.4
XRN1-206ENST00000467077 PTRH1Q86Y79 214 aaKnown RBP6.33□□□□□ -1.4
XRN1-206ENST00000467077 INO80BQ9C086 356 aaPredicted RBP6.33□□□□□ -1.4
XRN1-206ENST00000467077 PRKAG3Q9UGI9 489 aa6.33□□□□□ -1.4
XRN1-206ENST00000467077 FZD1Q9UP38 647 aa6.33□□□□□ -1.4
XRN1-206ENST00000467077 VWA7Q9Y334 891 aa6.33□□□□□ -1.4
XRN1-206ENST00000467077 CTDP1Q9Y5B0 961 aaPredicted RBP6.33□□□□□ -1.4
XRN1-206ENST00000467077 XDHP47989 1333 aa6.32□□□□□ -1.4
XRN1-206ENST00000467077 FGFR1P11362 822 aa6.32□□□□□ -1.4
XRN1-206ENST00000467077 KRT15P19012 456 aa6.32□□□□□ -1.4
XRN1-206ENST00000467077 SESN2P58004 480 aaPredicted RBP6.32□□□□□ -1.4
XRN1-206ENST00000467077 ATP2C1P98194 919 aaPredicted RBP6.32□□□□□ -1.4
XRN1-206ENST00000467077 COLEC12Q5KU26 742 aa6.32□□□□□ -1.4
XRN1-206ENST00000467077 ZNF362Q5T0B9 420 aaPredicted RBP6.32□□□□□ -1.4
XRN1-206ENST00000467077 MTDHQ86UE4 582 aaKnown RBP6.32□□□□□ -1.4
XRN1-206ENST00000467077 SLC7A6OSQ96CW6 309 aaPredicted RBP6.32□□□□□ -1.4
XRN1-206ENST00000467077 AMNQ9BXJ7 453 aa6.32□□□□□ -1.4
XRN1-206ENST00000467077 SLC6A15Q9H2J7 730 aa6.32□□□□□ -1.4
XRN1-206ENST00000467077 TOR3AQ9H497 397 aa6.32□□□□□ -1.4
XRN1-206ENST00000467077 GRID2IPA4D2P6 1211 aa6.31□□□□□ -1.4
XRN1-206ENST00000467077 GOLGA8BA8MQT2 603 aa6.31□□□□□ -1.4
XRN1-206ENST00000467077 H2AFYO75367 372 aaKnown RBP6.31□□□□□ -1.4
XRN1-206ENST00000467077 MPIG6BO95866 241 aa6.31□□□□□ -1.4
XRN1-206ENST00000467077 C4BPAP04003 597 aaKnown RBP6.31□□□□□ -1.4
XRN1-206ENST00000467077 PABPC1P11940 636 aaKnown RBP6.31□□□□□ -1.4
XRN1-206ENST00000467077 KLHDC10Q6PID8 442 aa6.31□□□□□ -1.4
XRN1-206ENST00000467077 FAM111BQ6SJ93 734 aa6.31□□□□□ -1.4
XRN1-206ENST00000467077 NSMFQ6X4W1 530 aa6.31□□□□□ -1.4
XRN1-206ENST00000467077 THAP3Q8WTV1 239 aaPredicted RBP6.31□□□□□ -1.4
XRN1-206ENST00000467077 ATXN2LQ8WWM7 1075 aaKnown RBP6.31□□□□□ -1.4
XRN1-206ENST00000467077 GCDHQ92947 438 aaPredicted RBP6.31□□□□□ -1.4
XRN1-206ENST00000467077 PGBD4Q96DM1 585 aa6.31□□□□□ -1.4
XRN1-206ENST00000467077 SGSM3Q96HU1 749 aa6.31□□□□□ -1.4
XRN1-206ENST00000467077 BLACEA4D250 179 aa6.3□□□□□ -1.4
XRN1-206ENST00000467077 IQCA1LA6NCM1 817 aa6.3□□□□□ -1.4
XRN1-206ENST00000467077 ATF4P18848 351 aaPredicted RBP6.3□□□□□ -1.4
XRN1-206ENST00000467077 ST5P78524 1137 aa6.3□□□□□ -1.4
XRN1-206ENST00000467077 OLFML1Q6UWY5 402 aa6.3□□□□□ -1.4
XRN1-206ENST00000467077 RD3Q7Z3Z2 195 aa6.3□□□□□ -1.4
XRN1-206ENST00000467077 CALML6Q8TD86 181 aa6.3□□□□□ -1.4
XRN1-206ENST00000467077 FBXW5Q969U6 566 aa6.3□□□□□ -1.4
XRN1-206ENST00000467077 TCF25Q9BQ70 676 aa6.3□□□□□ -1.4
XRN1-206ENST00000467077 CCSER2Q9H7U1 834 aa6.3□□□□□ -1.4
XRN1-206ENST00000467077 CYP4F11Q9HBI6 524 aa6.3□□□□□ -1.4
XRN1-206ENST00000467077 TRPS1Q9UHF7 1281 aa6.3□□□□□ -1.4
XRN1-206ENST00000467077 KLRG2A4D1S0 409 aaPredicted RBP6.29□□□□□ -1.4
XRN1-206ENST00000467077 KIAA0355O15063 1070 aa6.29□□□□□ -1.4
XRN1-206ENST00000467077 IPO13O94829 963 aaKnown RBP6.29□□□□□ -1.4
XRN1-206ENST00000467077 MMEP08473 750 aa6.29□□□□□ -1.4
XRN1-206ENST00000467077 VAMP1P23763 118 aa6.29□□□□□ -1.4
XRN1-206ENST00000467077 ADCY7P51828 1080 aa6.29□□□□□ -1.4
XRN1-206ENST00000467077 FKBP15Q5T1M5 1219 aa6.29□□□□□ -1.4
XRN1-206ENST00000467077 PAPD7Q5XG87 772 aaKnown RBP6.29□□□□□ -1.4
XRN1-206ENST00000467077 MFSD5Q6N075 450 aa6.29□□□□□ -1.4
XRN1-206ENST00000467077 MB21D1Q8N884 522 aa6.29□□□□□ -1.4
XRN1-206ENST00000467077 HIPK4Q8NE63 616 aa6.29□□□□□ -1.4
XRN1-206ENST00000467077 RPL10LQ96L21 214 aaKnown RBP6.29□□□□□ -1.4
XRN1-206ENST00000467077 MNTQ99583 582 aa6.29□□□□□ -1.4
XRN1-206ENST00000467077 TGIF2Q9GZN2 237 aa6.29□□□□□ -1.4
XRN1-206ENST00000467077 ACBD3Q9H3P7 528 aa6.29□□□□□ -1.4
XRN1-206ENST00000467077 CAPN10Q9HC96 672 aa6.29□□□□□ -1.4
XRN1-206ENST00000467077 AQP7O14520 342 aa6.28□□□□□ -1.4
XRN1-206ENST00000467077 MFAP3LO75121 409 aa6.28□□□□□ -1.4
XRN1-206ENST00000467077 CLASP2O75122 1294 aaKnown RBP6.28□□□□□ -1.4
XRN1-206ENST00000467077 APEX1P27695 318 aaKnown RBP6.28□□□□□ -1.4
XRN1-206ENST00000467077 BPIFB4P59827 614 aa6.28□□□□□ -1.4
XRN1-206ENST00000467077 HDLBPQ00341 1268 aaKnown RBP6.28□□□□□ -1.4
XRN1-206ENST00000467077 CRY1Q16526 586 aa6.28□□□□□ -1.4
XRN1-206ENST00000467077 TIGD2Q4W5G0 525 aa6.28□□□□□ -1.4
XRN1-206ENST00000467077 ANKRD53Q8N9V6 530 aa6.28□□□□□ -1.4
XRN1-206ENST00000467077 GFM2Q969S9 779 aaKnown RBP6.28□□□□□ -1.4
XRN1-206ENST00000467077 RCAN3Q9UKA8 241 aa6.28□□□□□ -1.4
XRN1-206ENST00000467077 SPATA31A6Q5VVP1 1343 aa6.27□□□□□ -1.41
XRN1-206ENST00000467077 GSTA4O15217 222 aa6.27□□□□□ -1.41
XRN1-206ENST00000467077 AMY2AP04746 511 aa6.27□□□□□ -1.41
XRN1-206ENST00000467077 AMY2BP19961 511 aa6.27□□□□□ -1.41
XRN1-206ENST00000467077 RABGGTBP53611 331 aa6.27□□□□□ -1.41
XRN1-206ENST00000467077 OSTM1Q86WC4 334 aa6.27□□□□□ -1.41
XRN1-206ENST00000467077 OSBP2Q969R2 916 aa6.27□□□□□ -1.41
XRN1-206ENST00000467077 FAM193BQ96PV7 902 aaPredicted RBP6.27□□□□□ -1.41
XRN1-206ENST00000467077 ARHGEF4Q9NR80 690 aa6.27□□□□□ -1.41
XRN1-206ENST00000467077 R3HCC1Q9Y3T6 440 aaKnown RBP6.27□□□□□ -1.41
XRN1-206ENST00000467077 TRAF6Q9Y4K3 522 aa6.27□□□□□ -1.41
XRN1-206ENST00000467077 RBM8AQ9Y5S9 174 aaKnown RBP6.27□□□□□ -1.41
XRN1-206ENST00000467077 COX11Q9Y6N1 276 aa6.27□□□□□ -1.41
XRN1-206ENST00000467077 TRAV20A0A0B4J274 112 aa6.26□□□□□ -1.41
XRN1-206ENST00000467077 UBE2QL1A1L167 161 aa6.26□□□□□ -1.41
XRN1-206ENST00000467077 WNT9AO14904 365 aa6.26□□□□□ -1.41
XRN1-206ENST00000467077 PYGMP11217 842 aa6.26□□□□□ -1.41
XRN1-206ENST00000467077 VPS37DQ86XT2 251 aa6.26□□□□□ -1.41
XRN1-206ENST00000467077 BEND2Q8NDZ0 799 aa6.26□□□□□ -1.41
XRN1-206ENST00000467077 ARL8AQ96BM9 186 aa6.26□□□□□ -1.41
XRN1-206ENST00000467077 GPHA2Q96T91 129 aa6.26□□□□□ -1.41
XRN1-206ENST00000467077 IL23AQ9NPF7 189 aa6.26□□□□□ -1.41
XRN1-206ENST00000467077 ASXL2Q76L83 1435 aa6.25□□□□□ -1.41
XRN1-206ENST00000467077 PRAMEF22A3QJZ6 481 aa6.25□□□□□ -1.41
XRN1-206ENST00000467077 KCNK3O14649 394 aa6.25□□□□□ -1.41
XRN1-206ENST00000467077 MAFO75444 373 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms