RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 SKA1Q96BD8 255 aa6.57□□□□□ -1.36
LRCH3-212ENST00000466845 TBC1D31Q96DN5 1066 aa6.57□□□□□ -1.36
LRCH3-212ENST00000466845 SELENOOQ9BVL4 669 aa6.57□□□□□ -1.36
LRCH3-212ENST00000466845 TRIM6Q9C030 488 aaPredicted RBP6.57□□□□□ -1.36
LRCH3-212ENST00000466845 SLKQ9H2G2 1235 aaPredicted RBP6.57□□□□□ -1.36
LRCH3-212ENST00000466845 RWDD1Q9H446 243 aaPredicted RBP6.57□□□□□ -1.36
LRCH3-212ENST00000466845 ZCCHC4Q9H5U6 513 aa6.57□□□□□ -1.36
LRCH3-212ENST00000466845 SH3GLB2Q9NR46 395 aa6.57□□□□□ -1.36
LRCH3-212ENST00000466845 MKS1Q9NXB0 559 aa6.57□□□□□ -1.36
LRCH3-212ENST00000466845 RABL2AQ9UBK7 228 aaPredicted RBP6.57□□□□□ -1.36
LRCH3-212ENST00000466845 APEX2Q9UBZ4 518 aa6.57□□□□□ -1.36
LRCH3-212ENST00000466845 TBK1Q9UHD2 729 aa6.57□□□□□ -1.36
LRCH3-212ENST00000466845 KIAA0556O60303 1618 aa6.57□□□□□ -1.36
LRCH3-212ENST00000466845 DIP2BQ9P265 1576 aa6.57□□□□□ -1.36
LRCH3-212ENST00000466845 ABCC2Q92887 1545 aa6.56□□□□□ -1.36
LRCH3-212ENST00000466845 UGGT2Q9NYU1 1516 aa6.56□□□□□ -1.36
LRCH3-212ENST00000466845 GOLGA3Q08378 1498 aa6.56□□□□□ -1.36
LRCH3-212ENST00000466845 ABCC10Q5T3U5 1492 aa6.56□□□□□ -1.36
LRCH3-212ENST00000466845 C7orf72A4D263 438 aa6.56□□□□□ -1.36
LRCH3-212ENST00000466845 AGRPO00253 132 aa6.56□□□□□ -1.36
LRCH3-212ENST00000466845 LETM1O95202 739 aaPredicted RBP6.56□□□□□ -1.36
LRCH3-212ENST00000466845 INHBBP09529 407 aa6.56□□□□□ -1.36
LRCH3-212ENST00000466845 FGRP09769 529 aa6.56□□□□□ -1.36
LRCH3-212ENST00000466845 BMP7P18075 431 aa6.56□□□□□ -1.36
LRCH3-212ENST00000466845 FBLN1P23142 703 aa6.56□□□□□ -1.36
LRCH3-212ENST00000466845 ZNF200P98182 395 aaPredicted RBP6.56□□□□□ -1.36
LRCH3-212ENST00000466845 SCRN1Q12765 414 aa6.56□□□□□ -1.36
LRCH3-212ENST00000466845 AGAP9Q5VTM2 703 aa6.56□□□□□ -1.36
LRCH3-212ENST00000466845 PPP4R3AQ6IN85 833 aa6.56□□□□□ -1.36
LRCH3-212ENST00000466845 ZNF449Q6P9G9 518 aa6.56□□□□□ -1.36
LRCH3-212ENST00000466845 KSR2Q6VAB6 950 aa6.56□□□□□ -1.36
LRCH3-212ENST00000466845 EEPD1Q7L9B9 569 aa6.56□□□□□ -1.36
LRCH3-212ENST00000466845 UHMK1Q8TAS1 419 aaKnown RBP6.56□□□□□ -1.36
LRCH3-212ENST00000466845 RPGRQ92834 1020 aaKnown RBP6.56□□□□□ -1.36
LRCH3-212ENST00000466845 PWWP2AQ96N64 755 aa6.56□□□□□ -1.36
LRCH3-212ENST00000466845 KCNC2Q96PR1 638 aa6.56□□□□□ -1.36
LRCH3-212ENST00000466845 CENPOQ9BU64 300 aa6.56□□□□□ -1.36
LRCH3-212ENST00000466845 ABCG4Q9H172 646 aa6.56□□□□□ -1.36
LRCH3-212ENST00000466845 EPB41L4AQ9HCS5 686 aaPredicted RBP6.56□□□□□ -1.36
LRCH3-212ENST00000466845 TRMT1Q9NXH9 659 aaKnown RBP6.56□□□□□ -1.36
LRCH3-212ENST00000466845 DONSONQ9NYP3 566 aa6.56□□□□□ -1.36
LRCH3-212ENST00000466845 LRP2BPQ9P2M1 347 aa6.56□□□□□ -1.36
LRCH3-212ENST00000466845 GTF2A1LQ9UNN4 478 aa6.56□□□□□ -1.36
LRCH3-212ENST00000466845 ITM2BQ9Y287 266 aa6.56□□□□□ -1.36
LRCH3-212ENST00000466845 PAXBP1Q9Y5B6 917 aa6.56□□□□□ -1.36
LRCH3-212ENST00000466845 ZC3H12DA2A288 527 aaKnown RBP6.55□□□□□ -1.36
LRCH3-212ENST00000466845 A6NCN8 305 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 DDAH1O94760 285 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 SCGB1D2O95969 90 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 SCG5P05408 212 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 PLS3P13797 630 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 GYS1P13807 737 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 GLULP15104 373 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 XBP1P17861 261 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 ATF3P18847 181 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 IL4RP24394 825 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 TACR1P25103 407 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 MAGEA8P43361 318 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 MASP1P48740 699 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 SNX16P57768 344 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 HLTFQ14527 1009 aaKnown RBP eCLIP6.55□□□□□ -1.36
LRCH3-212ENST00000466845 TESK1Q15569 626 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 SV2CQ496J9 727 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 SLC10A5Q5PT55 438 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 CTR9Q6PD62 1173 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 C6orf15Q6UXA7 325 aaPredicted RBP6.55□□□□□ -1.36
LRCH3-212ENST00000466845 CCBE1Q6UXH8 406 aaPredicted RBP6.55□□□□□ -1.36
LRCH3-212ENST00000466845 CPNE8Q86YQ8 564 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 DCP2Q8IU60 420 aaKnown RBP6.55□□□□□ -1.36
LRCH3-212ENST00000466845 ZNF713Q8N859 430 aaPredicted RBP6.55□□□□□ -1.36
LRCH3-212ENST00000466845 JMYQ8N9B5 988 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 NEK9Q8TD19 979 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 PANK1Q8TE04 598 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 SH3TC2Q8TF17 1288 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 ALG3Q92685 438 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 N4BP2L2Q92802 583 aaPredicted RBP6.55□□□□□ -1.36
LRCH3-212ENST00000466845 PPP1R14AQ96A00 147 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 SH3KBP1Q96B97 665 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 CDK5RAP3Q96JB5 506 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 VPS33BQ9H267 617 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 LUC7LQ9NQ29 371 aaKnown RBP6.55□□□□□ -1.36
LRCH3-212ENST00000466845 C9orf78Q9NZ63 289 aaPredicted RBP6.55□□□□□ -1.36
LRCH3-212ENST00000466845 UACAQ9BZF9 1416 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 DISP1Q96F81 1524 aa6.55□□□□□ -1.36
LRCH3-212ENST00000466845 CFAP65Q6ZU64 1925 aaKnown RBP6.54□□□□□ -1.36
LRCH3-212ENST00000466845 WASHC2AQ641Q2 1341 aa6.54□□□□□ -1.36
LRCH3-212ENST00000466845 FAM25EA8MYX2 175 aa6.54□□□□□ -1.36
LRCH3-212ENST00000466845 H0Y3Z8 333 aa6.54□□□□□ -1.36
LRCH3-212ENST00000466845 MYO1BO43795 1136 aa6.54□□□□□ -1.36
LRCH3-212ENST00000466845 SUSD5O60279 629 aa6.54□□□□□ -1.36
LRCH3-212ENST00000466845 CDC45O75419 566 aa6.54□□□□□ -1.36
LRCH3-212ENST00000466845 IDEP14735 1019 aa6.54□□□□□ -1.36
LRCH3-212ENST00000466845 KIF5BP33176 963 aa6.54□□□□□ -1.36
LRCH3-212ENST00000466845 ADD2P35612 726 aa6.54□□□□□ -1.36
LRCH3-212ENST00000466845 RBM5P52756 815 aaKnown RBP eCLIP6.54□□□□□ -1.36
LRCH3-212ENST00000466845 COPAP53621 1224 aa6.54□□□□□ -1.36
LRCH3-212ENST00000466845 CTSWP56202 376 aa6.54□□□□□ -1.36
LRCH3-212ENST00000466845 BPIFB3P59826 476 aa6.54□□□□□ -1.36
LRCH3-212ENST00000466845 FOXO4P98177 505 aa6.54□□□□□ -1.36
LRCH3-212ENST00000466845 NUCB1Q02818 461 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms