RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 RCC1LQ96I51 464 aaKnown RBP4□□□□□ -1.77
SORT1-202ENST00000466471 CLUHP3Q96NS8 147 aa4□□□□□ -1.77
SORT1-202ENST00000466471 TTC1Q99614 292 aa4□□□□□ -1.77
SORT1-202ENST00000466471 NRSN2Q9GZP1 204 aa4□□□□□ -1.77
SORT1-202ENST00000466471 WNT10AQ9GZT5 417 aa4□□□□□ -1.77
SORT1-202ENST00000466471 GBP3Q9H0R5 595 aa4□□□□□ -1.77
SORT1-202ENST00000466471 MRPL18Q9H0U6 180 aaKnown RBP4□□□□□ -1.77
SORT1-202ENST00000466471 TTYH1Q9H313 450 aaPredicted RBP4□□□□□ -1.77
SORT1-202ENST00000466471 TRIM39Q9HCM9 518 aa4□□□□□ -1.77
SORT1-202ENST00000466471 ZIM2Q9NZV7 527 aa4□□□□□ -1.77
SORT1-202ENST00000466471 ZNF462Q96JM2 2506 aa4□□□□□ -1.77
SORT1-202ENST00000466471 DDX60LQ5H9U9 1706 aaKnown RBP4□□□□□ -1.77
SORT1-202ENST00000466471 BRWD1Q9NSI6 2320 aa4□□□□□ -1.77
SORT1-202ENST00000466471 HELZ2Q9BYK8 2649 aaKnown RBP4□□□□□ -1.77
SORT1-202ENST00000466471 PSME4Q14997 1843 aa4□□□□□ -1.77
SORT1-202ENST00000466471 CEP250Q9BV73 2442 aa4□□□□□ -1.77
SORT1-202ENST00000466471 ARID1BQ8NFD5 2236 aaPredicted RBP3.99□□□□□ -1.77
SORT1-202ENST00000466471 A0A087WZG4 1122 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 IGF2BP3O00425 579 aaKnown RBP eCLIP3.99□□□□□ -1.77
SORT1-202ENST00000466471 TUBB4AP04350 444 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 PGRP06401 933 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 SLFN14P0C7P3 912 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 PABPC1P11940 636 aaKnown RBP3.99□□□□□ -1.77
SORT1-202ENST00000466471 GLB1P16278 677 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 BPIP17213 487 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 L1CAMP32004 1257 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 TMPOP42166 694 aaKnown RBP3.99□□□□□ -1.77
SORT1-202ENST00000466471 RAB27AP51159 221 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 MRPS5P82675 430 aaKnown RBP3.99□□□□□ -1.77
SORT1-202ENST00000466471 PURAQ00577 322 aaKnown RBP3.99□□□□□ -1.77
SORT1-202ENST00000466471 CRHR2Q13324 411 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 MTMR1Q13613 665 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 MORC3Q14149 939 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 SETDB1Q15047 1291 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 ZRSR2Q15696 482 aaKnown RBP3.99□□□□□ -1.77
SORT1-202ENST00000466471 FAM209AQ5JX71 171 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 TBC1D9BQ66K14 1250 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 HEATR6Q6AI08 1181 aaKnown RBP3.99□□□□□ -1.77
SORT1-202ENST00000466471 NSMFQ6X4W1 530 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 ZBTB46Q86UZ6 589 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 ZNF227Q86WZ6 799 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 MAP4K3Q8IVH8 894 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 SIRT2Q8IXJ6 389 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 RPAP2Q8IXW5 612 aaPredicted RBP3.99□□□□□ -1.77
SORT1-202ENST00000466471 TMEM130Q8N3G9 435 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 TMEM57Q8N5G2 664 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 MAGEB6Q8N7X4 407 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 CNBD1Q8NA66 436 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 SVIPQ8NHG7 77 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 TTC8Q8TAM2 541 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 IPO4Q8TEX9 1081 aaKnown RBP3.99□□□□□ -1.77
SORT1-202ENST00000466471 CFAP53Q96M91 514 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 FBXL18Q96ME1 805 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 SLC13A1Q9BZW2 595 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 IFT22Q9H7X7 185 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 PRR13Q9NZ81 148 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 WHRNQ9P202 907 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 CTNNA3Q9UI47 895 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 ZMYND8Q9ULU4 1186 aaPredicted RBP3.99□□□□□ -1.77
SORT1-202ENST00000466471 TNNQ9UQP3 1299 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.99□□□□□ -1.77
SORT1-202ENST00000466471 SPTBN2O15020 2390 aa3.99□□□□□ -1.77
SORT1-202ENST00000466471 MANSC4A6NHS7 340 aaPredicted RBP3.98□□□□□ -1.77
SORT1-202ENST00000466471 ERVV-2B6SEH9 535 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 SMIM22K7EJ46 135 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 PAX4O43316 350 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 DNAJA2O60884 412 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 VAMP4O75379 141 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 PPM1BO75688 479 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 DNAJC8O75937 253 aaPredicted RBP3.98□□□□□ -1.77
SORT1-202ENST00000466471 ABLIM3O94929 683 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 FBXO21O94952 628 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 CAVIN2O95810 425 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 C6orf222P0C671 652 aaPredicted RBP3.98□□□□□ -1.77
SORT1-202ENST00000466471 GSPT1P15170 499 aaKnown RBP3.98□□□□□ -1.77
SORT1-202ENST00000466471 PHKG2P15735 406 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 VCAM1P19320 739 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 SDSP20132 328 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 CD97P48960 835 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 MTHFSP49914 203 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 INHBEP58166 350 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 ST5P78524 1137 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 MAP4K2Q12851 820 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 INPP5AQ14642 412 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 STAT4Q14765 748 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 ARHGEF6Q15052 776 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 ATP2B3Q16720 1220 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 C21orf62-AS1Q17RA5 79 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 ZC3H12AQ5D1E8 599 aaKnown RBP3.98□□□□□ -1.77
SORT1-202ENST00000466471 TTC22Q5TAA0 569 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 SYDE2Q5VT97 1194 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 CAVIN1Q6NZI2 390 aaKnown RBP3.98□□□□□ -1.77
SORT1-202ENST00000466471 CNNM4Q6P4Q7 775 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 UBE2R2Q712K3 238 aaPredicted RBP3.98□□□□□ -1.77
SORT1-202ENST00000466471 APBB1IPQ7Z5R6 666 aaPredicted RBP3.98□□□□□ -1.77
SORT1-202ENST00000466471 C11orf96Q7Z7L8 435 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 MORC1Q86VD1 984 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 DGKHQ86XP1 1220 aa3.98□□□□□ -1.77
SORT1-202ENST00000466471 RAVER1Q8IY67 606 aaKnown RBP3.98□□□□□ -1.77
SORT1-202ENST00000466471 FTSJ3Q8IY81 847 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms