RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 DCXO43602 365 aa23.35■■□□□ 1.33
COL6A1-203ENST00000466285 DTNBO60941 627 aa23.35■■□□□ 1.33
COL6A1-203ENST00000466285 HMGB1P09429 215 aaKnown RBP23.35■■□□□ 1.33
COL6A1-203ENST00000466285 STAG3L1P0CL83 205 aa23.35■■□□□ 1.33
COL6A1-203ENST00000466285 SETQ01105 290 aaPredicted RBP23.35■■□□□ 1.33
COL6A1-203ENST00000466285 SMAD4Q13485 552 aaKnown RBP23.35■■□□□ 1.33
COL6A1-203ENST00000466285 METTL13Q8N6R0 699 aa23.35■■□□□ 1.33
COL6A1-203ENST00000466285 LARP6Q9BRS8 491 aaKnown RBP23.35■■□□□ 1.33
COL6A1-203ENST00000466285 MUTYHQ9UIF7 546 aa23.35■■□□□ 1.33
COL6A1-203ENST00000466285 CD207Q9UJ71 328 aa23.35■■□□□ 1.33
COL6A1-203ENST00000466285 TMEM150BA6NC51 233 aa23.34■■□□□ 1.33
COL6A1-203ENST00000466285 PRR33A8MZF0 331 aa23.34■■□□□ 1.33
COL6A1-203ENST00000466285 CHMP2AO43633 222 aa23.34■■□□□ 1.33
COL6A1-203ENST00000466285 CIITAP33076 1130 aa23.34■■□□□ 1.33
COL6A1-203ENST00000466285 PBX3P40426 434 aa23.34■■□□□ 1.33
COL6A1-203ENST00000466285 NDUFV1P49821 464 aa23.34■■□□□ 1.33
COL6A1-203ENST00000466285 TOB2Q14106 344 aaPredicted RBP23.34■■□□□ 1.33
COL6A1-203ENST00000466285 BBXQ8WY36 941 aaPredicted RBP23.34■■□□□ 1.33
COL6A1-203ENST00000466285 CWH43Q9H720 699 aa23.34■■□□□ 1.33
COL6A1-203ENST00000466285 PRKAG3Q9UGI9 489 aa23.34■■□□□ 1.33
COL6A1-203ENST00000466285 DENND3A2RUS2 1198 aa23.33■■□□□ 1.33
COL6A1-203ENST00000466285 PER2O15055 1255 aa23.33■■□□□ 1.33
COL6A1-203ENST00000466285 FGFR4P22455 802 aa23.33■■□□□ 1.33
COL6A1-203ENST00000466285 PDIA3P30101 505 aaKnown RBP23.33■■□□□ 1.33
COL6A1-203ENST00000466285 HOXD11P31277 338 aaPredicted RBP23.33■■□□□ 1.33
COL6A1-203ENST00000466285 ERVFC1P60507 584 aa23.33■■□□□ 1.33
COL6A1-203ENST00000466285 PRKCEQ02156 737 aa23.33■■□□□ 1.33
COL6A1-203ENST00000466285 DRP2Q13474 957 aa23.33■■□□□ 1.33
COL6A1-203ENST00000466285 LRRC55Q6ZSA7 311 aa23.33■■□□□ 1.33
COL6A1-203ENST00000466285 COLGALT1Q8NBJ5 622 aa23.33■■□□□ 1.33
COL6A1-203ENST00000466285 TNPO1Q92973 898 aaKnown RBP23.33■■□□□ 1.33
COL6A1-203ENST00000466285 AIFM3Q96NN9 605 aa23.33■■□□□ 1.33
COL6A1-203ENST00000466285 ADAMTS10Q9H324 1103 aa23.33■■□□□ 1.33
COL6A1-203ENST00000466285 UNC45AQ9H3U1 944 aa23.33■■□□□ 1.33
COL6A1-203ENST00000466285 TBC1D22BQ9NU19 505 aa23.33■■□□□ 1.33
COL6A1-203ENST00000466285 PCDHB7Q9Y5E2 793 aa23.33■■□□□ 1.33
COL6A1-203ENST00000466285 PCDHA10Q9Y5I2 948 aa23.33■■□□□ 1.33
COL6A1-203ENST00000466285 PSAPP07602 524 aa23.32■■□□□ 1.32
COL6A1-203ENST00000466285 CRYBB1P53674 252 aaPredicted RBP23.32■■□□□ 1.32
COL6A1-203ENST00000466285 SLC24A5Q71RS6 500 aa23.32■■□□□ 1.32
COL6A1-203ENST00000466285 SMAP1Q8IYB5 467 aaPredicted RBP23.32■■□□□ 1.32
COL6A1-203ENST00000466285 EFHBQ8N7U6 833 aa23.32■■□□□ 1.32
COL6A1-203ENST00000466285 RNF26Q9BY78 433 aaPredicted RBP23.32■■□□□ 1.32
COL6A1-203ENST00000466285 TYW1Q9NV66 732 aaKnown RBP23.32■■□□□ 1.32
COL6A1-203ENST00000466285 CCDC196A0A1B0GTZ2 297 aa23.31■■□□□ 1.32
COL6A1-203ENST00000466285 NCK2O43639 380 aa23.31■■□□□ 1.32
COL6A1-203ENST00000466285 FGF18O76093 207 aa23.31■■□□□ 1.32
COL6A1-203ENST00000466285 TDP2O95551 362 aa23.31■■□□□ 1.32
COL6A1-203ENST00000466285 OATP04181 439 aa23.31■■□□□ 1.32
COL6A1-203ENST00000466285 IFNAR1P17181 557 aa23.31■■□□□ 1.32
COL6A1-203ENST00000466285 NLRP11P59045 1033 aaKnown RBP23.31■■□□□ 1.32
COL6A1-203ENST00000466285 NPY5RQ15761 445 aa23.31■■□□□ 1.32
COL6A1-203ENST00000466285 NAALADL2Q58DX5 795 aa23.31■■□□□ 1.32
COL6A1-203ENST00000466285 FBXL16Q8N461 479 aa23.31■■□□□ 1.32
COL6A1-203ENST00000466285 SMRP1Q8NCR6 262 aa23.31■■□□□ 1.32
COL6A1-203ENST00000466285 CCDC136Q96JN2 1154 aa23.31■■□□□ 1.32
COL6A1-203ENST00000466285 SH2D3AQ9BRG2 576 aa23.31■■□□□ 1.32
COL6A1-203ENST00000466285 C1orf112Q9NSG2 853 aa23.31■■□□□ 1.32
COL6A1-203ENST00000466285 AKT3Q9Y243 479 aa23.31■■□□□ 1.32
COL6A1-203ENST00000466285 CSDE1O75534 798 aaKnown RBP23.3■■□□□ 1.32
COL6A1-203ENST00000466285 ALADP13716 330 aa23.3■■□□□ 1.32
COL6A1-203ENST00000466285 SPOUT1Q5T280 376 aaKnown RBP23.3■■□□□ 1.32
COL6A1-203ENST00000466285 RNF135Q8IUD6 432 aa23.3■■□□□ 1.32
COL6A1-203ENST00000466285 CCDC12Q8WUD4 166 aaPredicted RBP23.3■■□□□ 1.32
COL6A1-203ENST00000466285 SLC5A5Q92911 643 aa23.3■■□□□ 1.32
COL6A1-203ENST00000466285 DISC1Q9NRI5 854 aa23.3■■□□□ 1.32
COL6A1-203ENST00000466285 CDH22Q9UJ99 828 aa23.3■■□□□ 1.32
COL6A1-203ENST00000466285 SAMM50Q9Y512 469 aa23.3■■□□□ 1.32
COL6A1-203ENST00000466285 ARID2Q68CP9 1835 aa23.29■■□□□ 1.32
COL6A1-203ENST00000466285 WDR64B1ANS9 1081 aa23.29■■□□□ 1.32
COL6A1-203ENST00000466285 FSCN2O14926 492 aa23.29■■□□□ 1.32
COL6A1-203ENST00000466285 GPR182O15218 404 aa23.29■■□□□ 1.32
COL6A1-203ENST00000466285 EYA4O95677 639 aa23.29■■□□□ 1.32
COL6A1-203ENST00000466285 ATF7P17544 494 aaPredicted RBP23.29■■□□□ 1.32
COL6A1-203ENST00000466285 GNA11P29992 359 aa23.29■■□□□ 1.32
COL6A1-203ENST00000466285 FAM189BP81408 668 aa23.29■■□□□ 1.32
COL6A1-203ENST00000466285 EFCAB12Q6NXP0 572 aa23.29■■□□□ 1.32
COL6A1-203ENST00000466285 HFE2Q6ZVN8 426 aa23.29■■□□□ 1.32
COL6A1-203ENST00000466285 KMT2EQ8IZD2 1858 aa23.29■■□□□ 1.32
COL6A1-203ENST00000466285 CASD1Q96PB1 797 aa23.29■■□□□ 1.32
COL6A1-203ENST00000466285 TMEM161AQ9NX61 479 aa23.29■■□□□ 1.32
COL6A1-203ENST00000466285 FAM50BQ9Y247 325 aa23.29■■□□□ 1.32
COL6A1-203ENST00000466285 USP15Q9Y4E8 981 aaPredicted RBP23.29■■□□□ 1.32
COL6A1-203ENST00000466285 STBD1O95210 358 aa23.28■■□□□ 1.32
COL6A1-203ENST00000466285 GPC3P51654 580 aa23.28■■□□□ 1.32
COL6A1-203ENST00000466285 EVCP57679 992 aa23.28■■□□□ 1.32
COL6A1-203ENST00000466285 CLLU1OSQ5K130 101 aa23.28■■□□□ 1.32
COL6A1-203ENST00000466285 TBCKQ8TEA7 893 aa23.28■■□□□ 1.32
COL6A1-203ENST00000466285 CEP89Q96ST8 783 aa23.28■■□□□ 1.32
COL6A1-203ENST00000466285 TLR9Q9NR96 1032 aa23.28■■□□□ 1.32
COL6A1-203ENST00000466285 M0R2N6 131 aa23.27■■□□□ 1.32
COL6A1-203ENST00000466285 COASYQ13057 564 aa23.27■■□□□ 1.32
COL6A1-203ENST00000466285 LRCH2Q5VUJ6 765 aa23.27■■□□□ 1.32
COL6A1-203ENST00000466285 PLPP4Q5VZY2 271 aa23.27■■□□□ 1.32
COL6A1-203ENST00000466285 THNSL1Q8IYQ7 743 aa23.27■■□□□ 1.32
COL6A1-203ENST00000466285 CCDC148Q8NFR7 591 aa23.27■■□□□ 1.32
COL6A1-203ENST00000466285 UPF3BQ9BZI7 483 aaKnown RBP23.27■■□□□ 1.32
COL6A1-203ENST00000466285 ATP6V0A4Q9HBG4 840 aa23.27■■□□□ 1.32
COL6A1-203ENST00000466285 TCEAL9Q9UHQ7 104 aa23.27■■□□□ 1.32
COL6A1-203ENST00000466285 ARIH1Q9Y4X5 557 aaPredicted RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms