RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 CTNNA3Q9UI47 895 aa7.18□□□□□ -1.26
NCL-208ENST00000466274 PCOLCE2Q9UKZ9 415 aa7.18□□□□□ -1.26
NCL-208ENST00000466274 DIS3Q9Y2L1 958 aaKnown RBP7.18□□□□□ -1.26
NCL-208ENST00000466274 MROH7-TTC4A0A0A0MT08 1334 aa7.18□□□□□ -1.26
NCL-208ENST00000466274 DOCK3Q8IZD9 2030 aa7.18□□□□□ -1.26
NCL-208ENST00000466274 ROBO3Q96MS0 1386 aa7.18□□□□□ -1.26
NCL-208ENST00000466274 SPEF2Q9C093 1822 aa7.17□□□□□ -1.26
NCL-208ENST00000466274 ZDBF2Q9HCK1 2354 aa7.17□□□□□ -1.26
NCL-208ENST00000466274 DUSP11O75319 330 aaKnown RBP7.17□□□□□ -1.26
NCL-208ENST00000466274 CABYRO75952 493 aa7.17□□□□□ -1.26
NCL-208ENST00000466274 SLC25A27O95847 323 aa7.17□□□□□ -1.26
NCL-208ENST00000466274 ASGR1P07306 291 aa7.17□□□□□ -1.26
NCL-208ENST00000466274 CST5P28325 142 aaPredicted RBP7.17□□□□□ -1.26
NCL-208ENST00000466274 CCL23P55773 120 aa7.17□□□□□ -1.26
NCL-208ENST00000466274 RHBDL3P58872 404 aa7.17□□□□□ -1.26
NCL-208ENST00000466274 ZP2Q05996 745 aa7.17□□□□□ -1.26
NCL-208ENST00000466274 RRP1BQ14684 758 aaKnown RBP7.17□□□□□ -1.26
NCL-208ENST00000466274 COG2Q14746 738 aa7.17□□□□□ -1.26
NCL-208ENST00000466274 TMC7Q7Z402 723 aa7.17□□□□□ -1.26
NCL-208ENST00000466274 SULF2Q8IWU5 870 aa7.17□□□□□ -1.26
NCL-208ENST00000466274 MSL3Q8N5Y2 521 aaKnown RBP7.17□□□□□ -1.26
NCL-208ENST00000466274 TSPYL6Q8N831 410 aa7.17□□□□□ -1.26
NCL-208ENST00000466274 RETREG2Q8NC44 543 aa7.17□□□□□ -1.26
NCL-208ENST00000466274 ISL2Q96A47 359 aa7.17□□□□□ -1.26
NCL-208ENST00000466274 MISP3Q96FF7 219 aa7.17□□□□□ -1.26
NCL-208ENST00000466274 NOL10Q9BSC4 688 aaKnown RBP7.17□□□□□ -1.26
NCL-208ENST00000466274 TINF2Q9BSI4 451 aa7.17□□□□□ -1.26
NCL-208ENST00000466274 DUSP23Q9BVJ7 150 aa7.17□□□□□ -1.26
NCL-208ENST00000466274 SIL1Q9H173 461 aa7.17□□□□□ -1.26
NCL-208ENST00000466274 FAM86C1Q9NVL1 165 aa7.17□□□□□ -1.26
NCL-208ENST00000466274 ABCF2Q9UG63 623 aa7.17□□□□□ -1.26
NCL-208ENST00000466274 ADAMTS6Q9UKP5 1117 aa7.17□□□□□ -1.26
NCL-208ENST00000466274 ZBTB21Q9ULJ3 1066 aa7.17□□□□□ -1.26
NCL-208ENST00000466274 AKAP2Q9Y2D5 859 aa7.17□□□□□ -1.26
NCL-208ENST00000466274 SYNRGQ9UMZ2 1314 aa7.17□□□□□ -1.26
NCL-208ENST00000466274 PLXNB2O15031 1838 aa7.17□□□□□ -1.26
NCL-208ENST00000466274 LRRC37A2A6NM11 1700 aa7.16□□□□□ -1.26
NCL-208ENST00000466274 A0A1B0GUL7 405 aa7.16□□□□□ -1.26
NCL-208ENST00000466274 TMEM221A6NGB7 291 aa7.16□□□□□ -1.26
NCL-208ENST00000466274 M0R296 226 aa7.16□□□□□ -1.26
NCL-208ENST00000466274 ALDH1L1O75891 902 aa7.16□□□□□ -1.26
NCL-208ENST00000466274 CD4P01730 458 aa7.16□□□□□ -1.26
NCL-208ENST00000466274 C6orf222P0C671 652 aaPredicted RBP7.16□□□□□ -1.26
NCL-208ENST00000466274 VCAM1P19320 739 aa7.16□□□□□ -1.26
NCL-208ENST00000466274 FUT4P22083 530 aa7.16□□□□□ -1.26
NCL-208ENST00000466274 ARNTP27540 789 aa7.16□□□□□ -1.26
NCL-208ENST00000466274 JAG1P78504 1218 aa7.16□□□□□ -1.26
NCL-208ENST00000466274 ZYXQ15942 572 aaKnown RBP7.16□□□□□ -1.26
NCL-208ENST00000466274 PTPROQ16827 1216 aa7.16□□□□□ -1.26
NCL-208ENST00000466274 TWISTNBQ3B726 338 aaPredicted RBP7.16□□□□□ -1.26
NCL-208ENST00000466274 ZC3H12AQ5D1E8 599 aaKnown RBP7.16□□□□□ -1.26
NCL-208ENST00000466274 CCSAPQ6IQ19 270 aaPredicted RBP7.16□□□□□ -1.26
NCL-208ENST00000466274 NXPE4Q6UWF7 544 aa7.16□□□□□ -1.26
NCL-208ENST00000466274 DGLUCYQ7Z3D6 616 aa7.16□□□□□ -1.26
NCL-208ENST00000466274 TEX11Q8IYF3 940 aa7.16□□□□□ -1.26
NCL-208ENST00000466274 CCER1Q8TC90 406 aaPredicted RBP7.16□□□□□ -1.26
NCL-208ENST00000466274 NEK9Q8TD19 979 aa7.16□□□□□ -1.26
NCL-208ENST00000466274 ANKS1AQ92625 1134 aa7.16□□□□□ -1.26
NCL-208ENST00000466274 KIAA1683Q9H0B3 1180 aa7.16□□□□□ -1.26
NCL-208ENST00000466274 RPAP3Q9H6T3 665 aaPredicted RBP7.16□□□□□ -1.26
NCL-208ENST00000466274 SSU72Q9NP77 194 aaKnown RBP7.16□□□□□ -1.26
NCL-208ENST00000466274 MBNL3Q9NUK0 354 aaKnown RBP7.16□□□□□ -1.26
NCL-208ENST00000466274 VAV3Q9UKW4 847 aa7.16□□□□□ -1.26
NCL-208ENST00000466274 PLAGL2Q9UPG8 496 aa7.16□□□□□ -1.26
NCL-208ENST00000466274 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.16□□□□□ -1.26
NCL-208ENST00000466274 RLFQ13129 1914 aa7.16□□□□□ -1.26
NCL-208ENST00000466274 CFAP54Q96N23 3096 aa7.16□□□□□ -1.26
NCL-208ENST00000466274 SOWAHDA6NJG2 315 aa7.15□□□□□ -1.26
NCL-208ENST00000466274 NCK2O43639 380 aa7.15□□□□□ -1.26
NCL-208ENST00000466274 ZEB2O60315 1214 aa7.15□□□□□ -1.26
NCL-208ENST00000466274 LPXNO60711 386 aa7.15□□□□□ -1.26
NCL-208ENST00000466274 HLA-DOAP06340 250 aa7.15□□□□□ -1.26
NCL-208ENST00000466274 RNASE1P07998 156 aaKnown RBP7.15□□□□□ -1.26
NCL-208ENST00000466274 SUPT20HL2P0C7V6 817 aa7.15□□□□□ -1.26
NCL-208ENST00000466274 ZNF865P0CJ78 1059 aaPredicted RBP7.15□□□□□ -1.26
NCL-208ENST00000466274 RFC2P35250 354 aa7.15□□□□□ -1.26
NCL-208ENST00000466274 OXCT1P55809 520 aa7.15□□□□□ -1.26
NCL-208ENST00000466274 PRKCQQ04759 706 aa7.15□□□□□ -1.26
NCL-208ENST00000466274 PLS1Q14651 629 aa7.15□□□□□ -1.26
NCL-208ENST00000466274 KCTD2Q14681 263 aa7.15□□□□□ -1.26
NCL-208ENST00000466274 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.15□□□□□ -1.261e-323■■■■□ 24.6
NCL-208ENST00000466274 ZNF648Q5T619 568 aaPredicted RBP7.15□□□□□ -1.26
NCL-208ENST00000466274 MCTP2Q6DN12 878 aa7.15□□□□□ -1.26
NCL-208ENST00000466274 HERC6Q8IVU3 1022 aa7.15□□□□□ -1.26
NCL-208ENST00000466274 TOP6BLQ8N6T0 577 aa7.15□□□□□ -1.26
NCL-208ENST00000466274 SUCLG2Q96I99 432 aa7.15□□□□□ -1.26
NCL-208ENST00000466274 MMP19Q99542 508 aa7.15□□□□□ -1.26
NCL-208ENST00000466274 NOC4LQ9BVI4 516 aaKnown RBP7.15□□□□□ -1.26
NCL-208ENST00000466274 RC3H2Q9HBD1 1191 aaKnown RBP7.15□□□□□ -1.26
NCL-208ENST00000466274 MUTYHQ9UIF7 546 aa7.15□□□□□ -1.26
NCL-208ENST00000466274 USP34Q70CQ2 3546 aa7.15□□□□□ -1.27
NCL-208ENST00000466274 LOC285556D6RIA3 1793 aa7.15□□□□□ -1.27
NCL-208ENST00000466274 MYH3P11055 1940 aa7.15□□□□□ -1.27
NCL-208ENST00000466274 ZFHX2Q9C0A1 2572 aaPredicted RBP7.14□□□□□ -1.27
NCL-208ENST00000466274 CHD7Q9P2D1 2997 aa7.14□□□□□ -1.27
NCL-208ENST00000466274 WDFY4Q6ZS81 3184 aa7.14□□□□□ -1.27
NCL-208ENST00000466274 PRR23AA6NEV1 266 aa7.14□□□□□ -1.27
NCL-208ENST00000466274 H3BQ06 376 aaPredicted RBP7.14□□□□□ -1.27
NCL-208ENST00000466274 BIN1O00499 593 aa7.14□□□□□ -1.27
NCL-208ENST00000466274 BAG3O95817 575 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms