RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 LPIN1Q14693 890 aa10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 RAB30Q15771 203 aa10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 TMEM266Q2M3C6 531 aa10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 PLEKHG4Q58EX7 1191 aa10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 EFCAB12Q6NXP0 572 aa10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 B3GNT9Q6UX72 402 aa10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 NOSTRINQ8IVI9 506 aa10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 SLFN12Q8IYM2 578 aa10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 RDM1Q8NG50 284 aa10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 SEPT8Q92599 483 aa10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 SCLT1Q96NL6 688 aa10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 LXNQ9BS40 222 aa10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 TTYH1Q9H313 450 aaPredicted RBP10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 FOXP1Q9H334 677 aaPredicted RBP10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 TTC12Q9H892 705 aaPredicted RBP10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 CERS4Q9HA82 394 aa10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 SUGCTQ9HAC7 445 aa10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 NRBP2Q9NSY0 501 aa10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 RGL1Q9NZL6 768 aa10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 PCDHA12Q9UN75 941 aa10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 AKT3Q9Y243 479 aa10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 KIAA1671Q9BY89 1806 aa10.93□□□□□ -0.66
RTFDC1-205ENST00000466260 MYO9BQ13459 2157 aa10.92□□□□□ -0.66
RTFDC1-205ENST00000466260 VPS37CA5D8V6 355 aaPredicted RBP10.92□□□□□ -0.66
RTFDC1-205ENST00000466260 TLL1O43897 1013 aa10.92□□□□□ -0.66
RTFDC1-205ENST00000466260 CA3P07451 260 aa10.92□□□□□ -0.66
RTFDC1-205ENST00000466260 CD52P31358 61 aa10.92□□□□□ -0.66
RTFDC1-205ENST00000466260 QARSP47897 775 aaKnown RBP10.92□□□□□ -0.66
RTFDC1-205ENST00000466260 PSMC5P62195 406 aa10.92□□□□□ -0.66
RTFDC1-205ENST00000466260 TBC1D8BQ0IIM8 1120 aa10.92□□□□□ -0.66
RTFDC1-205ENST00000466260 NFX1Q12986 1120 aaKnown RBP10.92□□□□□ -0.66
RTFDC1-205ENST00000466260 EPHA7Q15375 998 aa10.92□□□□□ -0.66
RTFDC1-205ENST00000466260 KIZQ2M2Z5 673 aa10.92□□□□□ -0.66
RTFDC1-205ENST00000466260 XKR3Q5GH77 459 aa10.92□□□□□ -0.66
RTFDC1-205ENST00000466260 FAM26DQ5JW98 314 aa10.92□□□□□ -0.66
RTFDC1-205ENST00000466260 FBXO47Q5MNV8 452 aa10.92□□□□□ -0.66
RTFDC1-205ENST00000466260 IER5Q5VY09 327 aa10.92□□□□□ -0.66
RTFDC1-205ENST00000466260 PPP2R2DQ66LE6 453 aa10.92□□□□□ -0.66
RTFDC1-205ENST00000466260 HERC6Q8IVU3 1022 aa10.92□□□□□ -0.66
RTFDC1-205ENST00000466260 MYLIPQ8WY64 445 aa10.92□□□□□ -0.66
RTFDC1-205ENST00000466260 MAP7D2Q96T17 732 aa10.92□□□□□ -0.66
RTFDC1-205ENST00000466260 OSMRQ99650 979 aa10.92□□□□□ -0.66
RTFDC1-205ENST00000466260 ZNF576Q9H609 170 aa10.92□□□□□ -0.66
RTFDC1-205ENST00000466260 MTMR10Q9NXD2 777 aa10.92□□□□□ -0.66
RTFDC1-205ENST00000466260 WRAP73Q9P2S5 460 aaPredicted RBP10.92□□□□□ -0.66
RTFDC1-205ENST00000466260 A0A087WWV3 80 aa10.91□□□□□ -0.66
RTFDC1-205ENST00000466260 ABHD14A-ACY1A0A1B0GW23 586 aa10.91□□□□□ -0.66
RTFDC1-205ENST00000466260 AMHP03971 560 aa10.91□□□□□ -0.66
RTFDC1-205ENST00000466260 P4HBP07237 508 aaKnown RBP10.91□□□□□ -0.66
RTFDC1-205ENST00000466260 OR52Z1P0C646 297 aa10.91□□□□□ -0.66
RTFDC1-205ENST00000466260 TECP42680 631 aa10.91□□□□□ -0.66
RTFDC1-205ENST00000466260 NPEPPSP55786 919 aa10.91□□□□□ -0.66
RTFDC1-205ENST00000466260 SPIRE1Q08AE8 756 aa10.91□□□□□ -0.66
RTFDC1-205ENST00000466260 PAK2Q13177 524 aa10.91□□□□□ -0.66
RTFDC1-205ENST00000466260 DRP2Q13474 957 aa10.91□□□□□ -0.66
RTFDC1-205ENST00000466260 LARP1BQ659C4 914 aaKnown RBP10.91□□□□□ -0.66
RTFDC1-205ENST00000466260 GPR153Q6NV75 609 aa10.91□□□□□ -0.66
RTFDC1-205ENST00000466260 TSHZ1Q6ZSZ6 1077 aa10.91□□□□□ -0.66
RTFDC1-205ENST00000466260 RPAINQ86UA6 219 aa10.91□□□□□ -0.66
RTFDC1-205ENST00000466260 TPH2Q8IWU9 490 aa10.91□□□□□ -0.66
RTFDC1-205ENST00000466260 CEP170P1Q96L14 293 aa10.91□□□□□ -0.66
RTFDC1-205ENST00000466260 CCDC43Q96MW1 224 aaKnown RBP10.91□□□□□ -0.66
RTFDC1-205ENST00000466260 GUCD1Q96NT3 240 aa10.91□□□□□ -0.66
RTFDC1-205ENST00000466260 EIF2AK1Q9BQI3 630 aaKnown RBP10.91□□□□□ -0.66
RTFDC1-205ENST00000466260 CELF4Q9BZC1 486 aaKnown RBP10.91□□□□□ -0.66
RTFDC1-205ENST00000466260 SEMA6BQ9H3T3 888 aa10.91□□□□□ -0.66
RTFDC1-205ENST00000466260 AGO3Q9H9G7 860 aaKnown RBP10.91□□□□□ -0.66
RTFDC1-205ENST00000466260 SLC28A3Q9HAS3 691 aa10.91□□□□□ -0.66
RTFDC1-205ENST00000466260 CDHR5Q9HBB8 845 aa10.91□□□□□ -0.66
RTFDC1-205ENST00000466260 PCDHB6Q9Y5E3 794 aa10.91□□□□□ -0.66
RTFDC1-205ENST00000466260 RALGAPA2Q2PPJ7 1873 aa10.9□□□□□ -0.66
RTFDC1-205ENST00000466260 LCHNA4D1U4 455 aa10.9□□□□□ -0.66
RTFDC1-205ENST00000466260 K7ELQ4 463 aaPredicted RBP10.9□□□□□ -0.66
RTFDC1-205ENST00000466260 ZBTB39O15060 712 aa10.9□□□□□ -0.66
RTFDC1-205ENST00000466260 MAGEB2O15479 319 aa10.9□□□□□ -0.66
RTFDC1-205ENST00000466260 DKC1O60832 514 aaKnown RBP eCLIP10.9□□□□□ -0.66
RTFDC1-205ENST00000466260 RPS6KA5O75582 802 aa10.9□□□□□ -0.66
RTFDC1-205ENST00000466260 PPP1R37O75864 691 aa10.9□□□□□ -0.66
RTFDC1-205ENST00000466260 ARHGEF15O94989 841 aa10.9□□□□□ -0.66
RTFDC1-205ENST00000466260 TMOD1P28289 359 aa10.9□□□□□ -0.66
RTFDC1-205ENST00000466260 NLRP11P59045 1033 aaKnown RBP10.9□□□□□ -0.66
RTFDC1-205ENST00000466260 GRIN2CQ14957 1233 aa10.9□□□□□ -0.66
RTFDC1-205ENST00000466260 XKR9Q5GH70 373 aa10.9□□□□□ -0.66
RTFDC1-205ENST00000466260 ANO5Q75V66 913 aa10.9□□□□□ -0.66
RTFDC1-205ENST00000466260 SPRED2Q7Z698 418 aa10.9□□□□□ -0.66
RTFDC1-205ENST00000466260 FERMT3Q86UX7 667 aa10.9□□□□□ -0.66
RTFDC1-205ENST00000466260 KIAA0319LQ8IZA0 1049 aa10.9□□□□□ -0.66
RTFDC1-205ENST00000466260 IL27Q8NEV9 243 aa10.9□□□□□ -0.66
RTFDC1-205ENST00000466260 TMEM40Q8WWA1 233 aa10.9□□□□□ -0.66
RTFDC1-205ENST00000466260 APBB2Q92870 758 aa10.9□□□□□ -0.66
RTFDC1-205ENST00000466260 CDX2Q99626 313 aaPredicted RBP10.9□□□□□ -0.66
RTFDC1-205ENST00000466260 PRDM12Q9H4Q4 367 aa10.9□□□□□ -0.66
RTFDC1-205ENST00000466260 MTUS1Q9ULD2 1270 aa10.9□□□□□ -0.66
RTFDC1-205ENST00000466260 NOC2LQ9Y3T9 749 aaKnown RBP10.9□□□□□ -0.66
RTFDC1-205ENST00000466260 PCDHA11Q9Y5I1 949 aa10.9□□□□□ -0.66
RTFDC1-205ENST00000466260 MYH11P35749 1972 aa10.89□□□□□ -0.67
RTFDC1-205ENST00000466260 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.89□□□□□ -0.67
RTFDC1-205ENST00000466260 EFCAB14O75071 495 aa10.89□□□□□ -0.67
RTFDC1-205ENST00000466260 STBD1O95210 358 aa10.89□□□□□ -0.67
RTFDC1-205ENST00000466260 RPLP2P05387 115 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms