RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 PSPNO60542 156 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 ZSCAN22P10073 491 aaPredicted RBP5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 GLDCP23378 1020 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 GALK1P51570 392 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 CHMP4BP1P59074 171 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 CHRNEQ04844 493 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 DUSP4Q13115 394 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 SNW1Q13573 536 aaKnown RBP5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 RASA3Q14644 834 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 KCNA10Q16322 511 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 TMC3Q7Z5M5 1100 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 ADGRA1Q86SQ6 560 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 RASAL3Q86YV0 1011 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 IRF2BP1Q8IU81 584 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 SPPL2CQ8IUH8 684 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 SIAH1Q8IUQ4 282 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 ANKS4BQ8N8V4 417 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 WDR66Q8TBY9 1149 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 ENOX1Q8TC92 643 aaKnown RBP5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 TBC1D22AQ8WUA7 517 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 SHISA4Q96DD7 197 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 INTS4Q96HW7 963 aaKnown RBP5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 ZDHHC15Q96MV8 337 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 CRBNQ96SW2 442 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 MCOLN1Q9GZU1 580 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 BCL11AQ9H165 835 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 ASCC2Q9H1I8 757 aaPredicted RBP5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 SLC6A17Q9H1V8 727 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 CWC22Q9HCG8 908 aaKnown RBP5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 ADAMTS1Q9UHI8 967 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 GPR160Q9UJ42 338 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 DENND2AQ9ULE3 1009 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 DDX19BQ9UMR2 479 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 SMG5Q9UPR3 1016 aaKnown RBP5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 YBX2Q9Y2T7 364 aaKnown RBP5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 SALL1Q9NSC2 1324 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 PHIPQ8WWQ0 1821 aa5.88□□□□□ -1.47
EXOSC3-204ENST00000465860 MYOCOSA0A1B0GUC4 107 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 NOTOA8MTQ0 251 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 USP2O75604 605 aaPredicted RBP5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 EFEMP2O95967 443 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 CHGBP05060 677 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 RNF4P78317 190 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 HDLBPQ00341 1268 aaKnown RBP5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 MECOMQ03112 1051 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 OS9Q13438 667 aaPredicted RBP5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 LDLRAD1Q5T700 205 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 CDCP2Q5VXM1 449 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 RGMBQ6NW40 437 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 CDC42EP5Q6NZY7 148 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 HHIPL2Q6UWX4 724 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 APOBEC3FQ8IUX4 373 aaKnown RBP5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 RPAP2Q8IXW5 612 aaPredicted RBP5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 C2orf69Q8N8R5 385 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 SPATA5Q8NB90 893 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 GIPC2Q8TF65 315 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 TEKT1Q969V4 418 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 NSUN4Q96CB9 384 aaKnown RBP5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 EDC3Q96F86 508 aaKnown RBP5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 TCTN2Q96GX1 697 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 HHIPL1Q96JK4 782 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 MRIQ9BWK5 157 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 FOXP3Q9BZS1 431 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 ANTXR1Q9H6X2 564 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 EHMT1Q9H9B1 1298 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 GPR108Q9NPR9 543 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 DDX4Q9NQI0 724 aaKnown RBP5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 PIH1D3Q9NQM4 214 aaKnown RBP5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 UBP1Q9NZI7 540 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 ABCF2Q9UG63 623 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 GGT7Q9UJ14 662 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 PDS5AQ29RF7 1337 aaKnown RBP5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 RFX7Q2KHR2 1363 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 ATAD5Q96QE3 1844 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 PTPRFP10586 1907 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 MYH1P12882 1939 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 ADAMTS20P59510 1910 aa5.87□□□□□ -1.47
EXOSC3-204ENST00000465860 ZSWIM8A7E2V4 1837 aa5.86□□□□□ -1.47
EXOSC3-204ENST00000465860 ATRNL1Q5VV63 1379 aa5.86□□□□□ -1.47
EXOSC3-204ENST00000465860 GAKO14976 1311 aa5.86□□□□□ -1.47
EXOSC3-204ENST00000465860 RPL10P27635 214 aaKnown RBP5.86□□□□□ -1.47
EXOSC3-204ENST00000465860 MMP14P50281 582 aa5.86□□□□□ -1.47
EXOSC3-204ENST00000465860 KIF23Q02241 960 aaPredicted RBP5.86□□□□□ -1.47
EXOSC3-204ENST00000465860 CLCQ05315 142 aa5.86□□□□□ -1.47
EXOSC3-204ENST00000465860 TCP10Q12799 353 aa5.86□□□□□ -1.47
EXOSC3-204ENST00000465860 SNX17Q15036 470 aa5.86□□□□□ -1.47
EXOSC3-204ENST00000465860 SEZ6Q53EL9 994 aa5.86□□□□□ -1.47
EXOSC3-204ENST00000465860 GORABQ5T7V8 394 aa5.86□□□□□ -1.47
EXOSC3-204ENST00000465860 RNF111Q6ZNA4 994 aa5.86□□□□□ -1.47
EXOSC3-204ENST00000465860 GK5Q6ZS86 529 aa5.86□□□□□ -1.47
EXOSC3-204ENST00000465860 HS2ST1Q7LGA3 356 aa5.86□□□□□ -1.47
EXOSC3-204ENST00000465860 ZNF605Q86T29 641 aa5.86□□□□□ -1.47
EXOSC3-204ENST00000465860 AACSQ86V21 672 aa5.86□□□□□ -1.47
EXOSC3-204ENST00000465860 DAGLBQ8NCG7 672 aa5.86□□□□□ -1.47
EXOSC3-204ENST00000465860 ATG4CQ96DT6 458 aa5.86□□□□□ -1.47
EXOSC3-204ENST00000465860 R3HDMLQ9H3Y0 253 aa5.86□□□□□ -1.47
EXOSC3-204ENST00000465860 CNNM2Q9H8M5 875 aa5.86□□□□□ -1.47
EXOSC3-204ENST00000465860 GNL3LQ9NVN8 582 aaKnown RBP5.86□□□□□ -1.47
EXOSC3-204ENST00000465860 SUGT1Q9Y2Z0 365 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms