RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 FAM89AQ96GI7 184 aa4.37□□□□□ -1.71
SNX4-202ENST00000465505 SCLYQ96I15 445 aa4.37□□□□□ -1.71
SNX4-202ENST00000465505 GBP4Q96PP9 640 aa4.37□□□□□ -1.71
SNX4-202ENST00000465505 CELF4Q9BZC1 486 aaKnown RBP4.37□□□□□ -1.71
SNX4-202ENST00000465505 TANGO6Q9C0B7 1094 aa4.37□□□□□ -1.71
SNX4-202ENST00000465505 OR10A2Q9H208 303 aa4.37□□□□□ -1.71
SNX4-202ENST00000465505 KCNH7Q9NS40 1196 aa4.37□□□□□ -1.71
SNX4-202ENST00000465505 NAP1L2Q9ULW6 460 aaPredicted RBP4.37□□□□□ -1.71
SNX4-202ENST00000465505 COQ6Q9Y2Z9 468 aa4.37□□□□□ -1.71
SNX4-202ENST00000465505 PRAMEF22A3QJZ6 481 aa4.36□□□□□ -1.71
SNX4-202ENST00000465505 GOLGA6L22H0YM25 854 aa4.36□□□□□ -1.71
SNX4-202ENST00000465505 OVOL3O00110 214 aa4.36□□□□□ -1.71
SNX4-202ENST00000465505 EFCAB14O75071 495 aa4.36□□□□□ -1.71
SNX4-202ENST00000465505 SDHAP31040 664 aa4.36□□□□□ -1.71
SNX4-202ENST00000465505 FHL2Q14192 279 aa4.36□□□□□ -1.71
SNX4-202ENST00000465505 GRAMD4Q6IC98 578 aa4.36□□□□□ -1.71
SNX4-202ENST00000465505 OVCH1Q7RTY7 1134 aa4.36□□□□□ -1.71
SNX4-202ENST00000465505 BCL6BQ8N143 479 aaPredicted RBP4.36□□□□□ -1.71
SNX4-202ENST00000465505 ZNF808Q8N4W9 903 aaPredicted RBP4.36□□□□□ -1.71
SNX4-202ENST00000465505 WDR48Q8TAF3 677 aa4.36□□□□□ -1.71
SNX4-202ENST00000465505 MAGEB10Q96LZ2 347 aaPredicted RBP4.36□□□□□ -1.71
SNX4-202ENST00000465505 NELFAQ9H3P2 528 aa4.36□□□□□ -1.71
SNX4-202ENST00000465505 AGO3Q9H9G7 860 aaKnown RBP4.36□□□□□ -1.71
SNX4-202ENST00000465505 NDOR1Q9UHB4 597 aa4.36□□□□□ -1.71
SNX4-202ENST00000465505 ASB1Q9Y576 335 aa4.36□□□□□ -1.71
SNX4-202ENST00000465505 B3GALT1Q9Y5Z6 326 aa4.36□□□□□ -1.71
SNX4-202ENST00000465505 LOC102724159A0A0B4J2E5 919 aa4.35□□□□□ -1.71
SNX4-202ENST00000465505 PMS2P1A4D2B8 440 aa4.35□□□□□ -1.71
SNX4-202ENST00000465505 FOXP2O15409 715 aa4.35□□□□□ -1.71
SNX4-202ENST00000465505 KCNQ2O43526 872 aa4.35□□□□□ -1.71
SNX4-202ENST00000465505 RASGRP1O95267 797 aa4.35□□□□□ -1.71
SNX4-202ENST00000465505 C1SP09871 688 aa4.35□□□□□ -1.71
SNX4-202ENST00000465505 MSX2P35548 267 aaPredicted RBP4.35□□□□□ -1.71
SNX4-202ENST00000465505 MEOX1P50221 254 aa4.35□□□□□ -1.71
SNX4-202ENST00000465505 STAT5BP51692 787 aa4.35□□□□□ -1.71
SNX4-202ENST00000465505 TGFB2P61812 414 aa4.35□□□□□ -1.71
SNX4-202ENST00000465505 PTH1RQ03431 593 aa4.35□□□□□ -1.71
SNX4-202ENST00000465505 GRM7Q14831 915 aa4.35□□□□□ -1.71
SNX4-202ENST00000465505 PWP2Q15269 919 aaKnown RBP4.35□□□□□ -1.71
SNX4-202ENST00000465505 LSM12Q3MHD2 195 aaKnown RBP4.35□□□□□ -1.71
SNX4-202ENST00000465505 GPATCH11Q8N954 259 aa4.35□□□□□ -1.71
SNX4-202ENST00000465505 JMYQ8N9B5 988 aa4.35□□□□□ -1.71
SNX4-202ENST00000465505 SECISBP2LQ93073 1101 aaKnown RBP4.35□□□□□ -1.71
SNX4-202ENST00000465505 DEPDC7Q96QD5 511 aa4.35□□□□□ -1.71
SNX4-202ENST00000465505 HIRIP3Q9BW71 556 aaPredicted RBP4.35□□□□□ -1.71
SNX4-202ENST00000465505 CSRNP2Q9H175 543 aa4.35□□□□□ -1.71
SNX4-202ENST00000465505 RIPOR2Q9Y4F9 1068 aa4.35□□□□□ -1.71
SNX4-202ENST00000465505 TCRBV16S1A1N1A0A5B0 115 aa4.34□□□□□ -1.71
SNX4-202ENST00000465505 SLC12A8A0AV02 714 aa4.34□□□□□ -1.71
SNX4-202ENST00000465505 MAFO75444 373 aaPredicted RBP4.34□□□□□ -1.71
SNX4-202ENST00000465505 ZNF202O95125 648 aa4.34□□□□□ -1.71
SNX4-202ENST00000465505 PTMAP06454 111 aaKnown RBP4.34□□□□□ -1.71
SNX4-202ENST00000465505 ZBTB48P10074 688 aaPredicted RBP4.34□□□□□ -1.71
SNX4-202ENST00000465505 ACRV1P26436 265 aa4.34□□□□□ -1.71
SNX4-202ENST00000465505 HIBADHP31937 336 aaKnown RBP4.34□□□□□ -1.71
SNX4-202ENST00000465505 GTF2F1P35269 517 aaKnown RBP eCLIP4.34□□□□□ -1.71
SNX4-202ENST00000465505 CRB2Q5IJ48 1285 aa4.34□□□□□ -1.71
SNX4-202ENST00000465505 CATSPEREQ5SY80 951 aa4.34□□□□□ -1.71
SNX4-202ENST00000465505 ABHD17CQ6PCB6 329 aa4.34□□□□□ -1.71
SNX4-202ENST00000465505 FTSJ3Q8IY81 847 aaKnown RBP4.34□□□□□ -1.71
SNX4-202ENST00000465505 RTKN2Q8IZC4 609 aa4.34□□□□□ -1.71
SNX4-202ENST00000465505 HIPK4Q8NE63 616 aa4.34□□□□□ -1.71
SNX4-202ENST00000465505 OR14K1Q8NGZ2 314 aa4.34□□□□□ -1.71
SNX4-202ENST00000465505 CACTINQ8WUQ7 758 aaKnown RBP4.34□□□□□ -1.71
SNX4-202ENST00000465505 FOXRED1Q96CU9 486 aaPredicted RBP4.34□□□□□ -1.71
SNX4-202ENST00000465505 PLEKHG4BQ96PX9 1271 aa4.34□□□□□ -1.71
SNX4-202ENST00000465505 DNAJC7Q99615 494 aa4.34□□□□□ -1.71
SNX4-202ENST00000465505 ZNF703Q9H7S9 590 aaPredicted RBP4.34□□□□□ -1.71
SNX4-202ENST00000465505 TLR9Q9NR96 1032 aa4.34□□□□□ -1.71
SNX4-202ENST00000465505 SNTG2Q9NY99 539 aa4.34□□□□□ -1.71
SNX4-202ENST00000465505 CCDC163A0A0D9SF12 145 aa4.33□□□□□ -1.72
SNX4-202ENST00000465505 SLC26A4O43511 780 aa4.33□□□□□ -1.72
SNX4-202ENST00000465505 NPTXRO95502 500 aa4.33□□□□□ -1.72
SNX4-202ENST00000465505 APEX1P27695 318 aaKnown RBP4.33□□□□□ -1.72
SNX4-202ENST00000465505 ABHD18Q0P651 414 aa4.33□□□□□ -1.72
SNX4-202ENST00000465505 TMEM132BQ14DG7 1078 aa4.33□□□□□ -1.72
SNX4-202ENST00000465505 FNDC7Q5VTL7 733 aa4.33□□□□□ -1.72
SNX4-202ENST00000465505 SPTY2D1Q68D10 685 aaPredicted RBP4.33□□□□□ -1.72
SNX4-202ENST00000465505 FGD2Q7Z6J4 655 aa4.33□□□□□ -1.72
SNX4-202ENST00000465505 ADGRE4PQ86SQ3 457 aa4.33□□□□□ -1.72
SNX4-202ENST00000465505 AMER2Q8N7J2 671 aa4.33□□□□□ -1.72
SNX4-202ENST00000465505 CALML6Q8TD86 181 aa4.33□□□□□ -1.72
SNX4-202ENST00000465505 ARMC5Q96C12 935 aa4.33□□□□□ -1.72
SNX4-202ENST00000465505 HECAQ9UBI9 543 aaPredicted RBP4.33□□□□□ -1.72
SNX4-202ENST00000465505 FAM184BQ9ULE4 1060 aa4.33□□□□□ -1.72
SNX4-202ENST00000465505 CTDP1Q9Y5B0 961 aaPredicted RBP4.33□□□□□ -1.72
SNX4-202ENST00000465505 DEKP35659 375 aaKnown RBP4.32□□□□□ -1.72
SNX4-202ENST00000465505 ADCY7P51828 1080 aa4.32□□□□□ -1.72
SNX4-202ENST00000465505 ALDH6A1Q02252 535 aaKnown RBP4.32□□□□□ -1.72
SNX4-202ENST00000465505 DPTQ07507 201 aa4.32□□□□□ -1.72
SNX4-202ENST00000465505 TMEM177Q53S58 311 aa4.32□□□□□ -1.72
SNX4-202ENST00000465505 FAM43BQ6ZT52 329 aaPredicted RBP4.32□□□□□ -1.72
SNX4-202ENST00000465505 OTOP1Q7RTM1 612 aa4.32□□□□□ -1.72
SNX4-202ENST00000465505 BRAPQ7Z569 592 aa4.32□□□□□ -1.72
SNX4-202ENST00000465505 RTN4RL1Q86UN2 441 aaPredicted RBP4.32□□□□□ -1.72
SNX4-202ENST00000465505 SGMS1Q86VZ5 419 aa4.32□□□□□ -1.72
SNX4-202ENST00000465505 C2orf69Q8N8R5 385 aa4.32□□□□□ -1.72
SNX4-202ENST00000465505 IGSF22Q8N9C0 903 aa4.32□□□□□ -1.72
SNX4-202ENST00000465505 SHCBP1Q8NEM2 672 aa4.32□□□□□ -1.72
SNX4-202ENST00000465505 MRPL4Q9BYD3 311 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms