RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 USTQ9Y2C2 406 aa17.19■□□□□ 0.34
HDAC6-214ENST00000465269 KDM3AQ9Y4C1 1321 aa17.19■□□□□ 0.34
HDAC6-214ENST00000465269 CEP295Q9C0D2 2601 aa17.18■□□□□ 0.34
HDAC6-214ENST00000465269 PNMA6FA0A0J9YX94 578 aa17.18■□□□□ 0.34
HDAC6-214ENST00000465269 POTEMA6NI47 508 aa17.18■□□□□ 0.34
HDAC6-214ENST00000465269 CXCL14O95715 111 aa17.18■□□□□ 0.34
HDAC6-214ENST00000465269 KRT17Q04695 432 aa17.18■□□□□ 0.34
HDAC6-214ENST00000465269 POTEGQ6S5H5 508 aa17.18■□□□□ 0.34
HDAC6-214ENST00000465269 FAM228AQ86W67 206 aa17.18■□□□□ 0.34
HDAC6-214ENST00000465269 RNF169Q8NCN4 708 aa17.18■□□□□ 0.34
HDAC6-214ENST00000465269 ST13P5Q8NFI4 369 aaPredicted RBP17.18■□□□□ 0.34
HDAC6-214ENST00000465269 SMARCC2Q8TAQ2 1214 aa17.18■□□□□ 0.34
HDAC6-214ENST00000465269 OSMRQ99650 979 aa17.18■□□□□ 0.34
HDAC6-214ENST00000465269 TMEM117Q9H0C3 514 aa17.18■□□□□ 0.34
HDAC6-214ENST00000465269 C1orf112Q9NSG2 853 aa17.18■□□□□ 0.34
HDAC6-214ENST00000465269 TMEM161AQ9NX61 479 aa17.18■□□□□ 0.34
HDAC6-214ENST00000465269 ZFYVE26Q68DK2 2539 aa17.17■□□□□ 0.34
HDAC6-214ENST00000465269 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.17■□□□□ 0.34
HDAC6-214ENST00000465269 SMIM35A0A1B0GVV1 85 aa17.17■□□□□ 0.34
HDAC6-214ENST00000465269 MEIS2O14770 477 aa17.17■□□□□ 0.34
HDAC6-214ENST00000465269 RFX1P22670 979 aa17.17■□□□□ 0.34
HDAC6-214ENST00000465269 METAP2P50579 478 aaKnown RBP eCLIP17.17■□□□□ 0.34
HDAC6-214ENST00000465269 ATXN1P54253 815 aaKnown RBP17.17■□□□□ 0.34
HDAC6-214ENST00000465269 FAM189BP81408 668 aa17.17■□□□□ 0.34
HDAC6-214ENST00000465269 GRM4Q14833 912 aa17.17■□□□□ 0.34
HDAC6-214ENST00000465269 KIZQ2M2Z5 673 aa17.17■□□□□ 0.34
HDAC6-214ENST00000465269 XRRA1Q6P2D8 792 aa17.17■□□□□ 0.34
HDAC6-214ENST00000465269 TMEM173Q86WV6 379 aaPredicted RBP17.17■□□□□ 0.34
HDAC6-214ENST00000465269 KIAA0319LQ8IZA0 1049 aa17.17■□□□□ 0.34
HDAC6-214ENST00000465269 SLC39A11Q8N1S5 342 aa17.17■□□□□ 0.34
HDAC6-214ENST00000465269 SUMF1Q8NBK3 374 aa17.17■□□□□ 0.34
HDAC6-214ENST00000465269 GIMAP8Q8ND71 665 aaPredicted RBP17.17■□□□□ 0.34
HDAC6-214ENST00000465269 TBC1D17Q9HA65 648 aa17.17■□□□□ 0.34
HDAC6-214ENST00000465269 FANCMQ8IYD8 2048 aa17.16■□□□□ 0.34
HDAC6-214ENST00000465269 DCDC2BA2VCK2 349 aa17.16■□□□□ 0.34
HDAC6-214ENST00000465269 N4BP1O75113 896 aaKnown RBP17.16■□□□□ 0.34
HDAC6-214ENST00000465269 LRRN2O75325 713 aa17.16■□□□□ 0.34
HDAC6-214ENST00000465269 KLRC1P26715 233 aa17.16■□□□□ 0.34
HDAC6-214ENST00000465269 PDE1AP54750 535 aa17.16■□□□□ 0.34
HDAC6-214ENST00000465269 DSC3Q14574 896 aa17.16■□□□□ 0.34
HDAC6-214ENST00000465269 CLLU1OSQ5K130 101 aa17.16■□□□□ 0.34
HDAC6-214ENST00000465269 SLC22A17Q8WUG5 538 aa17.16■□□□□ 0.34
HDAC6-214ENST00000465269 ACSF2Q96CM8 615 aaPredicted RBP17.16■□□□□ 0.34
HDAC6-214ENST00000465269 GPRASP2Q96D09 838 aa17.16■□□□□ 0.34
HDAC6-214ENST00000465269 C2orf16Q68DN1 1984 aa17.15■□□□□ 0.34
HDAC6-214ENST00000465269 EVPLQ92817 2033 aa17.15■□□□□ 0.34
HDAC6-214ENST00000465269 PPM1AP35813 382 aa17.15■□□□□ 0.34
HDAC6-214ENST00000465269 MTMR1Q13613 665 aa17.15■□□□□ 0.34
HDAC6-214ENST00000465269 CCDC149Q6ZUS6 474 aa17.15■□□□□ 0.34
HDAC6-214ENST00000465269 VPS52Q8N1B4 723 aa17.15■□□□□ 0.34
HDAC6-214ENST00000465269 LRRC43Q8N309 656 aa17.15■□□□□ 0.34
HDAC6-214ENST00000465269 RILPL2Q969X0 211 aa17.15■□□□□ 0.34
HDAC6-214ENST00000465269 AZI2Q9H6S1 392 aa17.15■□□□□ 0.34
HDAC6-214ENST00000465269 DZANK1Q9NVP4 752 aa17.15■□□□□ 0.34
HDAC6-214ENST00000465269 COL4A3Q01955 1670 aa17.14■□□□□ 0.33
HDAC6-214ENST00000465269 RPLP2P05387 115 aaKnown RBP17.14■□□□□ 0.33
HDAC6-214ENST00000465269 MYBP10242 640 aa17.14■□□□□ 0.33
HDAC6-214ENST00000465269 GLULP15104 373 aa17.14■□□□□ 0.33
HDAC6-214ENST00000465269 UBE2SQ16763 222 aa17.14■□□□□ 0.33
HDAC6-214ENST00000465269 ANKRD45Q5TZF3 282 aa17.14■□□□□ 0.33
HDAC6-214ENST00000465269 OTOP3Q7RTS5 596 aa17.14■□□□□ 0.33
HDAC6-214ENST00000465269 CABP7Q86V35 215 aa17.14■□□□□ 0.33
HDAC6-214ENST00000465269 NME8Q8N427 588 aa17.14■□□□□ 0.33
HDAC6-214ENST00000465269 HELQQ8TDG4 1101 aa17.14■□□□□ 0.33
HDAC6-214ENST00000465269 BCL7CQ8WUZ0 217 aaPredicted RBP17.14■□□□□ 0.33
HDAC6-214ENST00000465269 ZNF668Q96K58 619 aaPredicted RBP17.14■□□□□ 0.33
HDAC6-214ENST00000465269 ZBP1Q9H171 429 aa17.14■□□□□ 0.33
HDAC6-214ENST00000465269 JPH1Q9HDC5 661 aaPredicted RBP17.14■□□□□ 0.33
HDAC6-214ENST00000465269 RNF216Q9NWF9 866 aaPredicted RBP17.14■□□□□ 0.33
HDAC6-214ENST00000465269 DLGAP2Q9P1A6 1054 aa17.14■□□□□ 0.33
HDAC6-214ENST00000465269 RCAN3Q9UKA8 241 aa17.14■□□□□ 0.33
HDAC6-214ENST00000465269 UBIAD1Q9Y5Z9 338 aa17.14■□□□□ 0.33
HDAC6-214ENST00000465269 ZZEF1O43149 2961 aa17.13■□□□□ 0.33
HDAC6-214ENST00000465269 GPR182O15218 404 aa17.13■□□□□ 0.33
HDAC6-214ENST00000465269 VTNP04004 478 aa17.13■□□□□ 0.33
HDAC6-214ENST00000465269 STAT5BP51692 787 aa17.13■□□□□ 0.33
HDAC6-214ENST00000465269 BCAR1P56945 870 aa17.13■□□□□ 0.33
HDAC6-214ENST00000465269 ACTR2P61160 394 aa17.13■□□□□ 0.33
HDAC6-214ENST00000465269 GPR149Q86SP6 731 aa17.13■□□□□ 0.33
HDAC6-214ENST00000465269 MAML2Q8IZL2 1156 aaPredicted RBP17.13■□□□□ 0.33
HDAC6-214ENST00000465269 ABI1Q8IZP0 508 aa17.13■□□□□ 0.33
HDAC6-214ENST00000465269 TMEM87AQ8NBN3 555 aa17.13■□□□□ 0.33
HDAC6-214ENST00000465269 CUL5Q93034 780 aa17.13■□□□□ 0.33
HDAC6-214ENST00000465269 FOXQ1Q9C009 403 aa17.13■□□□□ 0.33
HDAC6-214ENST00000465269 ELAC1Q9H777 363 aaKnown RBP17.13■□□□□ 0.33
HDAC6-214ENST00000465269 SLC9A2Q9UBY0 812 aa17.13■□□□□ 0.33
HDAC6-214ENST00000465269 FAM208BQ5VWN6 2430 aa17.13■□□□□ 0.33
HDAC6-214ENST00000465269 SPDYE4A6NLX3 237 aa17.12■□□□□ 0.33
HDAC6-214ENST00000465269 TBC1D8BQ0IIM8 1120 aa17.12■□□□□ 0.33
HDAC6-214ENST00000465269 TRAF1Q13077 416 aa17.12■□□□□ 0.33
HDAC6-214ENST00000465269 ZC3H14Q6PJT7 736 aaKnown RBP17.12■□□□□ 0.33
HDAC6-214ENST00000465269 CWC27Q6UX04 472 aaKnown RBP17.12■□□□□ 0.33
HDAC6-214ENST00000465269 ECHDC2Q86YB7 292 aa17.12■□□□□ 0.33
HDAC6-214ENST00000465269 C1orf210Q8IVY1 113 aa17.12■□□□□ 0.33
HDAC6-214ENST00000465269 GPR152Q8TDT2 470 aa17.12■□□□□ 0.33
HDAC6-214ENST00000465269 KRT23Q9C075 422 aa17.12■□□□□ 0.33
HDAC6-214ENST00000465269 FASNP49327 2511 aaKnown RBP17.12■□□□□ 0.33
HDAC6-214ENST00000465269 SDSP20132 328 aa17.11■□□□□ 0.33
HDAC6-214ENST00000465269 LONRF3Q496Y0 759 aa17.11■□□□□ 0.33
HDAC6-214ENST00000465269 TRMT1LQ7Z2T5 733 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms