RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 MTMR7Q9Y216 660 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 ATP8A1Q9Y2Q0 1164 aa7.93□□□□□ -1.14
USP48-206ENST00000464577 GTPBP10A4D1E9 387 aaKnown RBP7.92□□□□□ -1.14
USP48-206ENST00000464577 DDX3XO00571 662 aaKnown RBP eCLIP7.92□□□□□ -1.14
USP48-206ENST00000464577 BUB1BO60566 1050 aaPredicted RBP7.92□□□□□ -1.14
USP48-206ENST00000464577 ATP2C2O75185 946 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 FGGP02679 453 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 TMEM253P0C7T8 217 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 PLA2G4BP0C869 781 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 ACTN1P12814 892 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 HSPA6P17066 643 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 CYP11B2P19099 503 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 SLC9A1P19634 815 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 NR2F2P24468 414 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 SATB1Q01826 763 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 ADCY2Q08462 1091 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 SLC4A8Q2Y0W8 1093 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 TNFAIP8L3Q5GJ75 292 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 HERC4Q5GLZ8 1057 aaPredicted RBP7.92□□□□□ -1.14
USP48-206ENST00000464577 C6orf118Q5T5N4 469 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 TRPM8Q7Z2W7 1104 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 DAAM2Q86T65 1068 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 GPBP1Q86WP2 473 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 LRRC34Q8IZ02 419 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 SLC30A5Q8TAD4 765 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 WDR66Q8TBY9 1149 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 RFFLQ8WZ73 363 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 HAS1Q92839 578 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 TRIM51Q9BSJ1 452 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 MOV10L1Q9BXT6 1211 aaKnown RBP7.92□□□□□ -1.14
USP48-206ENST00000464577 TRIM6Q9C030 488 aaPredicted RBP7.92□□□□□ -1.14
USP48-206ENST00000464577 METTL14Q9HCE5 456 aaKnown RBP7.92□□□□□ -1.14
USP48-206ENST00000464577 LRRC4CQ9HCJ2 640 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 KCNMB3Q9NPA1 279 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 TFCP2L1Q9NZI6 479 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 DDX25Q9UHL0 483 aaKnown RBP7.92□□□□□ -1.14
USP48-206ENST00000464577 BAIAP2L1Q9UHR4 511 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 RASAL2Q9UJF2 1139 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 C15orf41Q9Y2V0 281 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 PLIN4Q96Q06 1357 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 C10orf71Q711Q0 1435 aa7.92□□□□□ -1.14
USP48-206ENST00000464577 RGS16O15492 202 aaPredicted RBP7.91□□□□□ -1.14
USP48-206ENST00000464577 CALUO43852 315 aaPredicted RBP7.91□□□□□ -1.14
USP48-206ENST00000464577 OAS1P00973 400 aaKnown RBP7.91□□□□□ -1.14
USP48-206ENST00000464577 SHBGP04278 402 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 LDHBP07195 334 aaKnown RBP7.91□□□□□ -1.14
USP48-206ENST00000464577 LDHCP07864 332 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 LMNB1P20700 586 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 CDK8P49336 464 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 CLK2P49760 499 aaKnown RBP7.91□□□□□ -1.14
USP48-206ENST00000464577 ZNF131P52739 623 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 RPS8P62241 208 aaKnown RBP7.91□□□□□ -1.14
USP48-206ENST00000464577 PPATQ06203 517 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 ASPRV1Q53RT3 343 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 ZDHHC24Q6UX98 284 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 PROCA1Q8NCQ7 364 aaPredicted RBP7.91□□□□□ -1.14
USP48-206ENST00000464577 OLIG1Q8TAK6 271 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 L3MBTL3Q96JM7 780 aaPredicted RBP7.91□□□□□ -1.14
USP48-206ENST00000464577 SELENOSQ9BQE4 189 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 KANSL2Q9H9L4 492 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 INTS9Q9NV88 658 aaKnown RBP7.91□□□□□ -1.14
USP48-206ENST00000464577 TBC1D7Q9P0N9 293 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 PARP2Q9UGN5 583 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 TRPC6Q9Y210 931 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 DAAM1Q9Y4D1 1078 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 COL14A1Q05707 1796 aaKnown RBP7.91□□□□□ -1.14
USP48-206ENST00000464577 TAF1P21675 1872 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 LOC102724428A0A0B4J2F2 783 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 PDXKO00764 312 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 KIF3CO14782 793 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 PPP1R12AO14974 1030 aaPredicted RBP7.91□□□□□ -1.14
USP48-206ENST00000464577 KIAA0391O15091 583 aaKnown RBP7.91□□□□□ -1.14
USP48-206ENST00000464577 XRCC5P13010 732 aaKnown RBP7.91□□□□□ -1.14
USP48-206ENST00000464577 NQO1P15559 274 aaKnown RBP7.91□□□□□ -1.14
USP48-206ENST00000464577 STAT1P42224 750 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 TNNI2P48788 182 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 GALCP54803 685 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 SIK1P57059 783 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 MAPK7Q13164 816 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 PLS1Q14651 629 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 KNOP1Q1ED39 458 aaKnown RBP7.91□□□□□ -1.14
USP48-206ENST00000464577 BMT2Q1RMZ1 405 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 ACCSLQ4AC99 568 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 KIAA1755Q5JYT7 1200 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 MFSD5Q6N075 450 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 EPM2AIP1Q7L775 607 aaPredicted RBP7.91□□□□□ -1.14
USP48-206ENST00000464577 JAMLQ86YT9 394 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 GBP7Q8N8V2 638 aaPredicted RBP7.91□□□□□ -1.14
USP48-206ENST00000464577 LNX1Q8TBB1 728 aaPredicted RBP7.91□□□□□ -1.14
USP48-206ENST00000464577 U2AF1L4Q8WU68 220 aaKnown RBP7.91□□□□□ -1.14
USP48-206ENST00000464577 TGFBRAP1Q8WUH2 860 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 RNF25Q96BH1 459 aaPredicted RBP7.91□□□□□ -1.14
USP48-206ENST00000464577 STAMBPL1Q96FJ0 436 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 AZI2Q9H6S1 392 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 VAT1LQ9HCJ6 419 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 NOP53Q9NZM5 478 aaKnown RBP7.91□□□□□ -1.14
USP48-206ENST00000464577 MYH14Q7Z406 1995 aaKnown RBP7.91□□□□□ -1.14
USP48-206ENST00000464577 RPTORQ8N122 1335 aa7.91□□□□□ -1.14
USP48-206ENST00000464577 COL5A3P25940 1745 aaPredicted RBP7.9□□□□□ -1.14
USP48-206ENST00000464577 SPDYE3A6NKU9 549 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms