RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 ADAMTS10Q9H324 1103 aa18.24■□□□□ 0.51
SSNA1-204ENST00000464553 SUGCTQ9HAC7 445 aa18.24■□□□□ 0.51
SSNA1-204ENST00000464553 ERVK-5Q9HDB9 667 aa18.24■□□□□ 0.51
SSNA1-204ENST00000464553 C1orf112Q9NSG2 853 aa18.24■□□□□ 0.51
SSNA1-204ENST00000464553 SEPT9Q9UHD8 586 aaPredicted RBP18.24■□□□□ 0.51
SSNA1-204ENST00000464553 NOL7Q9UMY1 257 aaKnown RBP18.24■□□□□ 0.51
SSNA1-204ENST00000464553 AKT3Q9Y243 479 aa18.24■□□□□ 0.51
SSNA1-204ENST00000464553 GTPBP6O43824 516 aaPredicted RBP18.23■□□□□ 0.51
SSNA1-204ENST00000464553 SLITRK3O94933 977 aa18.23■□□□□ 0.51
SSNA1-204ENST00000464553 RFC5P40937 340 aa18.23■□□□□ 0.51
SSNA1-204ENST00000464553 CLCN3P51790 818 aa18.23■□□□□ 0.51
SSNA1-204ENST00000464553 NLRP11P59045 1033 aaKnown RBP18.23■□□□□ 0.51
SSNA1-204ENST00000464553 GUCY1B3Q02153 619 aa18.23■□□□□ 0.51
SSNA1-204ENST00000464553 ADGRE1Q14246 886 aa18.23■□□□□ 0.51
SSNA1-204ENST00000464553 MTERF2Q49AM1 385 aa18.23■□□□□ 0.51
SSNA1-204ENST00000464553 TMCO2Q7Z6W1 182 aaPredicted RBP18.23■□□□□ 0.51
SSNA1-204ENST00000464553 NPAS4Q8IUM7 802 aa18.23■□□□□ 0.51
SSNA1-204ENST00000464553 INO80BQ9C086 356 aaPredicted RBP18.23■□□□□ 0.51
SSNA1-204ENST00000464553 CDHR5Q9HBB8 845 aa18.23■□□□□ 0.51
SSNA1-204ENST00000464553 CYP26B1Q9NR63 512 aa18.23■□□□□ 0.51
SSNA1-204ENST00000464553 NOC2LQ9Y3T9 749 aaKnown RBP18.23■□□□□ 0.51
SSNA1-204ENST00000464553 RWDD3Q9Y3V2 267 aa18.23■□□□□ 0.51
SSNA1-204ENST00000464553 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.23■□□□□ 0.51
SSNA1-204ENST00000464553 LCHNA4D1U4 455 aa18.22■□□□□ 0.51
SSNA1-204ENST00000464553 UPP2O95045 317 aa18.22■□□□□ 0.51
SSNA1-204ENST00000464553 VTNP04004 478 aa18.22■□□□□ 0.51
SSNA1-204ENST00000464553 TXKP42681 527 aa18.22■□□□□ 0.51
SSNA1-204ENST00000464553 NFX1Q12986 1120 aaKnown RBP18.22■□□□□ 0.51
SSNA1-204ENST00000464553 KIZQ2M2Z5 673 aa18.22■□□□□ 0.51
SSNA1-204ENST00000464553 NCAPH2Q6IBW4 605 aa18.22■□□□□ 0.51
SSNA1-204ENST00000464553 FAM117BQ6P1L5 589 aa18.22■□□□□ 0.51
SSNA1-204ENST00000464553 SLC24A5Q71RS6 500 aa18.22■□□□□ 0.51
SSNA1-204ENST00000464553 ZNF410Q86VK4 478 aa18.22■□□□□ 0.51
SSNA1-204ENST00000464553 SLC7A3Q8WY07 619 aa18.22■□□□□ 0.51
SSNA1-204ENST00000464553 ARNTL2Q8WYA1 636 aa18.22■□□□□ 0.51
SSNA1-204ENST00000464553 LXNQ9BS40 222 aa18.22■□□□□ 0.51
SSNA1-204ENST00000464553 RGS18Q9NS28 235 aa18.22■□□□□ 0.51
SSNA1-204ENST00000464553 ANKEF1Q9NU02 776 aa18.22■□□□□ 0.51
SSNA1-204ENST00000464553 ST3GAL5Q9UNP4 418 aa18.22■□□□□ 0.51
SSNA1-204ENST00000464553 GINS2Q9Y248 185 aa18.22■□□□□ 0.51
SSNA1-204ENST00000464553 COL4A6Q14031 1691 aa18.22■□□□□ 0.51
SSNA1-204ENST00000464553 ASAP2O43150 1006 aa18.21■□□□□ 0.51
SSNA1-204ENST00000464553 DGKIO75912 1065 aa18.21■□□□□ 0.51
SSNA1-204ENST00000464553 RB1P06400 928 aa18.21■□□□□ 0.51
SSNA1-204ENST00000464553 DARSP14868 501 aaKnown RBP18.21■□□□□ 0.51
SSNA1-204ENST00000464553 MUTP22033 750 aa18.21■□□□□ 0.51
SSNA1-204ENST00000464553 IGFBP4P22692 258 aa18.21■□□□□ 0.51
SSNA1-204ENST00000464553 YWHABP31946 246 aaKnown RBP18.21■□□□□ 0.51
SSNA1-204ENST00000464553 MCM7P33993 719 aa18.21■□□□□ 0.51
SSNA1-204ENST00000464553 GPC3P51654 580 aa18.21■□□□□ 0.51
SSNA1-204ENST00000464553 FOSBP53539 338 aa18.21■□□□□ 0.51
SSNA1-204ENST00000464553 FAM189BP81408 668 aa18.21■□□□□ 0.51
SSNA1-204ENST00000464553 LRRC71Q8N4P6 559 aa18.21■□□□□ 0.51
SSNA1-204ENST00000464553 ZNF689Q96CS4 500 aaPredicted RBP18.21■□□□□ 0.51
SSNA1-204ENST00000464553 CEP170P1Q96L14 293 aa18.21■□□□□ 0.51
SSNA1-204ENST00000464553 EIF2AK1Q9BQI3 630 aaKnown RBP18.21■□□□□ 0.51
SSNA1-204ENST00000464553 GCOM2Q9BZD3 368 aaPredicted RBP18.21■□□□□ 0.51
SSNA1-204ENST00000464553 TMX1Q9H3N1 280 aa18.21■□□□□ 0.51
SSNA1-204ENST00000464553 DHX33Q9H6R0 707 aaKnown RBP18.21■□□□□ 0.51
SSNA1-204ENST00000464553 ELAC1Q9H777 363 aaKnown RBP18.21■□□□□ 0.51
SSNA1-204ENST00000464553 STK24Q9Y6E0 443 aa18.21■□□□□ 0.51
SSNA1-204ENST00000464553 MICAL3Q7RTP6 2002 aa18.2■□□□□ 0.5
SSNA1-204ENST00000464553 DENND3A2RUS2 1198 aa18.2■□□□□ 0.5
SSNA1-204ENST00000464553 LAD1O00515 517 aa18.2■□□□□ 0.5
SSNA1-204ENST00000464553 ARHGEF15O94989 841 aa18.2■□□□□ 0.5
SSNA1-204ENST00000464553 SARSP49591 514 aaKnown RBP18.2■□□□□ 0.5
SSNA1-204ENST00000464553 TPH2Q8IWU9 490 aa18.2■□□□□ 0.5
SSNA1-204ENST00000464553 FIBCD1Q8N539 461 aa18.2■□□□□ 0.5
SSNA1-204ENST00000464553 TMEM40Q8WWA1 233 aa18.2■□□□□ 0.5
SSNA1-204ENST00000464553 TCP11Q8WWU5 503 aa18.2■□□□□ 0.5
SSNA1-204ENST00000464553 DYDC2Q96IM9 177 aa18.2■□□□□ 0.5
SSNA1-204ENST00000464553 OSMRQ99650 979 aa18.2■□□□□ 0.5
SSNA1-204ENST00000464553 CHST12Q9NRB3 414 aa18.2■□□□□ 0.5
SSNA1-204ENST00000464553 RGL1Q9NZL6 768 aa18.2■□□□□ 0.5
SSNA1-204ENST00000464553 SUCLA2Q9P2R7 463 aaPredicted RBP18.2■□□□□ 0.5
SSNA1-204ENST00000464553 MTCH2Q9Y6C9 303 aa18.2■□□□□ 0.5
SSNA1-204ENST00000464553 GBF1Q92538 1859 aa18.2■□□□□ 0.5
SSNA1-204ENST00000464553 OR52Z1P0C646 297 aa18.19■□□□□ 0.5
SSNA1-204ENST00000464553 ZSCAN20P17040 1043 aaPredicted RBP18.19■□□□□ 0.5
SSNA1-204ENST00000464553 PDIA5Q14554 519 aa18.19■□□□□ 0.5
SSNA1-204ENST00000464553 DSC3Q14574 896 aa18.19■□□□□ 0.5
SSNA1-204ENST00000464553 TMEM266Q2M3C6 531 aa18.19■□□□□ 0.5
SSNA1-204ENST00000464553 TTC38Q5R3I4 469 aa18.19■□□□□ 0.5
SSNA1-204ENST00000464553 FAM228AQ86W67 206 aa18.19■□□□□ 0.5
SSNA1-204ENST00000464553 CMTR2Q8IYT2 770 aaKnown RBP18.19■□□□□ 0.5
SSNA1-204ENST00000464553 ERMNQ8TAM6 284 aa18.19■□□□□ 0.5
SSNA1-204ENST00000464553 LINC01599Q8WXQ3 324 aa18.19■□□□□ 0.5
SSNA1-204ENST00000464553 CLP1Q92989 425 aaKnown RBP18.19■□□□□ 0.5
SSNA1-204ENST00000464553 ADAM2Q99965 735 aa18.19■□□□□ 0.5
SSNA1-204ENST00000464553 TMEM60Q9H2L4 133 aa18.19■□□□□ 0.5
SSNA1-204ENST00000464553 RC3H2Q9HBD1 1191 aaKnown RBP18.19■□□□□ 0.5
SSNA1-204ENST00000464553 TUFT1Q9NNX1 390 aa18.19■□□□□ 0.5
SSNA1-204ENST00000464553 WRAP73Q9P2S5 460 aaPredicted RBP18.19■□□□□ 0.5
SSNA1-204ENST00000464553 LRFN2Q9ULH4 789 aa18.19■□□□□ 0.5
SSNA1-204ENST00000464553 PCDHB7Q9Y5E2 793 aa18.19■□□□□ 0.5
SSNA1-204ENST00000464553 C9IYK1 514 aa18.18■□□□□ 0.5
SSNA1-204ENST00000464553 C5orf67F2Z3F1 127 aa18.18■□□□□ 0.5
SSNA1-204ENST00000464553 WNT7AO00755 349 aa18.18■□□□□ 0.5
SSNA1-204ENST00000464553 ATP2B1P20020 1258 aa18.18■□□□□ 0.5
SSNA1-204ENST00000464553 POLGP54098 1239 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms