RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 DDB1Q16531 1140 aa6.4□□□□□ -1.38
USP25-207ENST00000464435 CD276Q5ZPR3 534 aa6.4□□□□□ -1.38
USP25-207ENST00000464435 ESRP1Q6NXG1 681 aaKnown RBP6.4□□□□□ -1.38
USP25-207ENST00000464435 C11orf74Q86VG3 221 aa6.4□□□□□ -1.38
USP25-207ENST00000464435 IGDCC4Q8TDY8 1250 aa6.4□□□□□ -1.38
USP25-207ENST00000464435 BORCS6Q96GS4 357 aa6.4□□□□□ -1.38
USP25-207ENST00000464435 ZSWIM3Q96MP5 696 aa6.4□□□□□ -1.38
USP25-207ENST00000464435 ELF4Q99607 663 aaPredicted RBP6.4□□□□□ -1.38
USP25-207ENST00000464435 B3GALT1Q9Y5Z6 326 aa6.4□□□□□ -1.38
USP25-207ENST00000464435 ATP23Q9Y6H3 246 aa6.4□□□□□ -1.38
USP25-207ENST00000464435 FAM90A27PA6NNH2 459 aa6.39□□□□□ -1.39
USP25-207ENST00000464435 ZNF839A8K0R7 811 aa6.39□□□□□ -1.39
USP25-207ENST00000464435 CLASP2O75122 1294 aaKnown RBP6.39□□□□□ -1.39
USP25-207ENST00000464435 FBXO21O94952 628 aa6.39□□□□□ -1.39
USP25-207ENST00000464435 KIF11P52732 1056 aa6.39□□□□□ -1.39
USP25-207ENST00000464435 SKIDA1Q1XH10 827 aa6.39□□□□□ -1.39
USP25-207ENST00000464435 ABCB5Q2M3G0 1257 aa6.39□□□□□ -1.39
USP25-207ENST00000464435 SYDE2Q5VT97 1194 aa6.39□□□□□ -1.39
USP25-207ENST00000464435 BROXQ5VW32 411 aa6.39□□□□□ -1.39
USP25-207ENST00000464435 BTBD8Q5XKL5 378 aa6.39□□□□□ -1.39
USP25-207ENST00000464435 TRMT10BQ6PF06 316 aaKnown RBP6.39□□□□□ -1.39
USP25-207ENST00000464435 EP400NLQ6ZTU2 488 aa6.39□□□□□ -1.39
USP25-207ENST00000464435 PRRT2Q7Z6L0 340 aaPredicted RBP6.39□□□□□ -1.39
USP25-207ENST00000464435 TTC9BQ8N6N2 239 aa6.39□□□□□ -1.39
USP25-207ENST00000464435 ZCCHC14Q8WYQ9 949 aaKnown RBP6.39□□□□□ -1.39
USP25-207ENST00000464435 DLG3Q92796 817 aa6.39□□□□□ -1.39
USP25-207ENST00000464435 MBD6Q96DN6 1003 aa6.39□□□□□ -1.39
USP25-207ENST00000464435 RBM15Q96T37 977 aaKnown RBP eCLIP6.39□□□□□ -1.39
USP25-207ENST00000464435 PCIF1Q9H4Z3 704 aa6.39□□□□□ -1.39
USP25-207ENST00000464435 TOMM22Q9NS69 142 aa6.39□□□□□ -1.39
USP25-207ENST00000464435 ARHGAP20Q9P2F6 1191 aa6.39□□□□□ -1.39
USP25-207ENST00000464435 INVSQ9Y283 1065 aa6.39□□□□□ -1.39
USP25-207ENST00000464435 SPO11Q9Y5K1 396 aa6.39□□□□□ -1.39
USP25-207ENST00000464435 ACOT7O00154 380 aa6.38□□□□□ -1.39
USP25-207ENST00000464435 HIP1RO75146 1068 aa6.38□□□□□ -1.39
USP25-207ENST00000464435 ULK1O75385 1050 aa6.38□□□□□ -1.39
USP25-207ENST00000464435 KNG1P01042 644 aa6.38□□□□□ -1.39
USP25-207ENST00000464435 COL6A1P12109 1028 aa6.38□□□□□ -1.39
USP25-207ENST00000464435 PTPN1P18031 435 aaKnown RBP6.38□□□□□ -1.39
USP25-207ENST00000464435 IARSP41252 1262 aaKnown RBP6.38□□□□□ -1.39
USP25-207ENST00000464435 NEK2P51955 445 aa6.38□□□□□ -1.39
USP25-207ENST00000464435 ERVK-21P61565 698 aa6.38□□□□□ -1.39
USP25-207ENST00000464435 PFKPQ01813 784 aa6.38□□□□□ -1.39
USP25-207ENST00000464435 MCL1Q07820 350 aa6.38□□□□□ -1.39
USP25-207ENST00000464435 DBPQ10586 325 aaPredicted RBP6.38□□□□□ -1.39
USP25-207ENST00000464435 NFATC3Q12968 1075 aa6.38□□□□□ -1.39
USP25-207ENST00000464435 TERF2Q15554 542 aa6.38□□□□□ -1.39
USP25-207ENST00000464435 ZNF174Q15697 407 aa6.38□□□□□ -1.39
USP25-207ENST00000464435 TBC1D10BQ4KMP7 808 aaPredicted RBP6.38□□□□□ -1.39
USP25-207ENST00000464435 DPP8Q6V1X1 898 aaPredicted RBP6.38□□□□□ -1.39
USP25-207ENST00000464435 CBARPQ8N350 705 aaPredicted RBP6.38□□□□□ -1.39
USP25-207ENST00000464435 SAMD11Q96NU1 681 aa6.38□□□□□ -1.39
USP25-207ENST00000464435 ZMAT4Q9H898 229 aa6.38□□□□□ -1.39
USP25-207ENST00000464435 KCND1Q9NSA2 647 aa6.38□□□□□ -1.39
USP25-207ENST00000464435 CHPF2Q9P2E5 772 aa6.38□□□□□ -1.39
USP25-207ENST00000464435 ADAM29Q9UKF5 820 aa6.38□□□□□ -1.39
USP25-207ENST00000464435 EID1Q9Y6B2 187 aa6.38□□□□□ -1.39
USP25-207ENST00000464435 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.37□□□□□ -1.39
USP25-207ENST00000464435 RASSF10A6NK89 507 aa6.37□□□□□ -1.39
USP25-207ENST00000464435 LAMTOR5O43504 91 aa6.37□□□□□ -1.39
USP25-207ENST00000464435 C4BPAP04003 597 aaKnown RBP6.37□□□□□ -1.39
USP25-207ENST00000464435 ADRB1P08588 477 aa6.37□□□□□ -1.39
USP25-207ENST00000464435 SESN3P58005 492 aa6.37□□□□□ -1.39
USP25-207ENST00000464435 HERVK_113P62684 666 aa6.37□□□□□ -1.39
USP25-207ENST00000464435 SMAD3P84022 425 aaKnown RBP6.37□□□□□ -1.39
USP25-207ENST00000464435 TMEM132BQ14DG7 1078 aa6.37□□□□□ -1.39
USP25-207ENST00000464435 ZNF827Q17R98 1081 aa6.37□□□□□ -1.39
USP25-207ENST00000464435 CATSPEREQ5SY80 951 aa6.37□□□□□ -1.39
USP25-207ENST00000464435 REXO1L1PQ8IX06 675 aa6.37□□□□□ -1.39
USP25-207ENST00000464435 CMIPQ8IY22 773 aa6.37□□□□□ -1.39
USP25-207ENST00000464435 KCNH7Q9NS40 1196 aa6.37□□□□□ -1.39
USP25-207ENST00000464435 RIC8BQ9NVN3 520 aa6.37□□□□□ -1.39
USP25-207ENST00000464435 ZFP69BQ9UJL9 534 aa6.37□□□□□ -1.39
USP25-207ENST00000464435 TNKSO95271 1327 aa6.36□□□□□ -1.39
USP25-207ENST00000464435 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.36□□□□□ -1.39
USP25-207ENST00000464435 PRAMEF25A6NGN4 478 aa6.36□□□□□ -1.39
USP25-207ENST00000464435 K7ESF4 209 aa6.36□□□□□ -1.39
USP25-207ENST00000464435 B4GALT3O60512 393 aa6.36□□□□□ -1.39
USP25-207ENST00000464435 KLHL18O94889 574 aa6.36□□□□□ -1.39
USP25-207ENST00000464435 MT-CO1P00395 513 aa6.36□□□□□ -1.39
USP25-207ENST00000464435 AHCYL2Q96HN2 611 aaKnown RBP6.36□□□□□ -1.39
USP25-207ENST00000464435 AJUBAQ96IF1 538 aa6.36□□□□□ -1.39
USP25-207ENST00000464435 TOPORSQ9NS56 1045 aaPredicted RBP6.36□□□□□ -1.39
USP25-207ENST00000464435 C14orf119Q9NWQ9 140 aa6.36□□□□□ -1.39
USP25-207ENST00000464435 RBPJLQ9UBG7 517 aa6.36□□□□□ -1.39
USP25-207ENST00000464435 H0Y858 1186 aa6.35□□□□□ -1.39
USP25-207ENST00000464435 CUTAO60888 179 aa6.35□□□□□ -1.39
USP25-207ENST00000464435 MMEP08473 750 aa6.35□□□□□ -1.39
USP25-207ENST00000464435 MAGEA10P43363 369 aaPredicted RBP6.35□□□□□ -1.39
USP25-207ENST00000464435 EPHB4P54760 987 aa6.35□□□□□ -1.39
USP25-207ENST00000464435 EPHB1P54762 984 aa6.35□□□□□ -1.39
USP25-207ENST00000464435 PPP2CBP62714 309 aa6.35□□□□□ -1.39
USP25-207ENST00000464435 PPP2CAP67775 309 aa6.35□□□□□ -1.39
USP25-207ENST00000464435 PHC1P78364 1004 aa6.35□□□□□ -1.39
USP25-207ENST00000464435 LRRC41Q15345 812 aa6.35□□□□□ -1.39
USP25-207ENST00000464435 INAVAQ3KP66 663 aa6.35□□□□□ -1.39
USP25-207ENST00000464435 CC2D1AQ6P1N0 951 aaPredicted RBP6.35□□□□□ -1.39
USP25-207ENST00000464435 GLB1LQ6UWU2 654 aa6.35□□□□□ -1.39
USP25-207ENST00000464435 Q6ZUG5 572 aa6.35□□□□□ -1.39
USP25-207ENST00000464435 CXXC5Q7LFL8 322 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms