RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 ARL8AQ96BM9 186 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 ACCSQ96QU6 501 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 CALN1Q9BXU9 219 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 PACSIN1Q9BY11 444 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 DAGLAQ9Y4D2 1042 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 WNT7AO00755 349 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 RAD51CO43502 376 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 TMEM191BP0C7N4 346 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 MYBP10242 640 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 PDHBP11177 359 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 UCHL3P15374 230 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 TAL1P17542 331 aaPredicted RBP9.79□□□□□ -0.84
HPS4-208ENST00000464362 FGFR4P22455 802 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 CA4P22748 312 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 GUCY2CP25092 1073 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 IRX4P78413 519 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 SLC18A3Q16572 532 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 ZBTB33Q86T24 672 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 HOMEZQ8IX15 550 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 RPUSD2Q8IZ73 545 aaKnown RBP9.79□□□□□ -0.84
HPS4-208ENST00000464362 RNF25Q96BH1 459 aaPredicted RBP9.79□□□□□ -0.84
HPS4-208ENST00000464362 CNOT8Q9UFF9 292 aaKnown RBP9.79□□□□□ -0.84
HPS4-208ENST00000464362 TCRBV5S4A2TA0A5A2 114 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 PHF20L1A8MW92 1017 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 CCDC188H7C350 402 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 HMGB2P26583 209 aaKnown RBP9.79□□□□□ -0.84
HPS4-208ENST00000464362 GCKP35557 465 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 KCNJ1P48048 391 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 GALCP54803 685 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 ITIH3Q06033 890 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 RCN2Q14257 317 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 BRDTQ58F21 947 aaPredicted RBP9.79□□□□□ -0.84
HPS4-208ENST00000464362 CDKAL1Q5VV42 579 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 FOXR1Q6PIV2 292 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 PADI6Q6TGC4 694 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 MMS22LQ6ZRQ5 1243 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 SDCCAG8Q86SQ7 713 aaPredicted RBP9.79□□□□□ -0.84
HPS4-208ENST00000464362 NLRP14Q86W24 1093 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 SCYL3Q8IZE3 742 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 NLGN1Q8N2Q7 840 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 LINC00116Q8NCU8 138 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 RUNDC3BQ96NL0 473 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 REEP2Q9BRK0 252 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 C11orf70Q9BRQ4 267 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 SPZ1Q9BXG8 430 aa9.79□□□□□ -0.84
HPS4-208ENST00000464362 hCG_1984214I3L0E3 225 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 PSMD14O00487 310 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 SAT1P21673 171 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 BASP1P80723 227 aaKnown RBP9.78□□□□□ -0.84
HPS4-208ENST00000464362 CUL1Q13616 776 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 SF3B3Q15393 1217 aaKnown RBP9.78□□□□□ -0.84
HPS4-208ENST00000464362 BBS9Q3SYG4 887 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 TTI2Q6NXR4 508 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 SEPT14Q6ZU15 432 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 FBXO33Q7Z6M2 555 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 ZNF713Q8N859 430 aaPredicted RBP9.78□□□□□ -0.84
HPS4-208ENST00000464362 ATP6V1G3Q96LB4 118 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 RNPC3Q96LT9 517 aaKnown RBP9.78□□□□□ -0.84
HPS4-208ENST00000464362 EHD4Q9H223 541 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 INTUQ9ULD6 942 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 TRPC6Q9Y210 931 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 PDS5AQ29RF7 1337 aaKnown RBP9.78□□□□□ -0.84
HPS4-208ENST00000464362 EXOC1LA0A1B0GW35 172 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 ARHGAP42A6NI28 874 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 H7C0C1 242 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 INO80B-WBP1J3KQ70 363 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 ATMINO43313 823 aaPredicted RBP9.78□□□□□ -0.84
HPS4-208ENST00000464362 PPP1R37O75864 691 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 TROVE2P10155 538 aaKnown RBP eCLIP9.78□□□□□ -0.84
HPS4-208ENST00000464362 FGFR2P21802 821 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 ATP5OP48047 213 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 HERVK_113P62684 666 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 SPATS2Q86XZ4 545 aaKnown RBP9.78□□□□□ -0.84
HPS4-208ENST00000464362 SLC30A5Q8TAD4 765 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 MAIP1Q8WWC4 291 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 C7orf25Q9BPX7 421 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 EIF2AK1Q9BQI3 630 aaKnown RBP9.78□□□□□ -0.84
HPS4-208ENST00000464362 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.78□□□□□ -0.841e-9■■□□□ 14.2
HPS4-208ENST00000464362 ZNF341Q9BYN7 854 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 INO80BQ9C086 356 aaPredicted RBP9.78□□□□□ -0.84
HPS4-208ENST00000464362 CLEC11AQ9Y240 323 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 EMSYQ7Z589 1322 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 GMNCA6NCL1 334 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 C21orf2O43822 256 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 DKC1O60832 514 aaKnown RBP eCLIP9.78□□□□□ -0.84
HPS4-208ENST00000464362 ZNF543Q08ER8 600 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 GLE1Q53GS7 698 aaKnown RBP9.78□□□□□ -0.84
HPS4-208ENST00000464362 PDXDC2PQ6P474 469 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 PPP4R3CPQ6ZMV5 832 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 COA1Q9GZY4 146 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 DNAJC5Q9H3Z4 198 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 TYW1Q9NV66 732 aaKnown RBP9.78□□□□□ -0.84
HPS4-208ENST00000464362 ARHGAP20Q9P2F6 1191 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 PLAGL2Q9UPG8 496 aa9.78□□□□□ -0.84
HPS4-208ENST00000464362 RSPH10B2B2RC85 870 aa9.77□□□□□ -0.84
HPS4-208ENST00000464362 RSPH10BP0C881 870 aa9.77□□□□□ -0.84
HPS4-208ENST00000464362 MUM1Q2TAK8 710 aa9.77□□□□□ -0.84
HPS4-208ENST00000464362 NAALADL2Q58DX5 795 aa9.77□□□□□ -0.84
HPS4-208ENST00000464362 TMEM179Q6ZVK1 233 aa9.77□□□□□ -0.84
HPS4-208ENST00000464362 LMNTD2Q8IXW0 634 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms