RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 CEP55Q53EZ4 464 aa16.49■□□□□ 0.23
SMC1A-204ENST00000463684 ASTLQ6HA08 431 aaPredicted RBP16.49■□□□□ 0.23
SMC1A-204ENST00000463684 TMEM105Q8N8V8 129 aa16.49■□□□□ 0.23
SMC1A-204ENST00000463684 PPP1R16BQ96T49 567 aa16.49■□□□□ 0.23
SMC1A-204ENST00000463684 POMKQ9H5K3 350 aa16.49■□□□□ 0.23
SMC1A-204ENST00000463684 AGO4Q9HCK5 861 aaKnown RBP16.49■□□□□ 0.23
SMC1A-204ENST00000463684 SPG21Q9NZD8 308 aa16.49■□□□□ 0.23
SMC1A-204ENST00000463684 COL1A2P08123 1366 aa16.49■□□□□ 0.23
SMC1A-204ENST00000463684 ZDBF2Q9HCK1 2354 aa16.49■□□□□ 0.23
SMC1A-204ENST00000463684 IGKV6D-21A0A0A0MT36 114 aa16.48■□□□□ 0.23
SMC1A-204ENST00000463684 PRC1O43663 620 aa16.48■□□□□ 0.23
SMC1A-204ENST00000463684 FOSP01100 380 aaPredicted RBP16.48■□□□□ 0.23
SMC1A-204ENST00000463684 ZSCAN20P17040 1043 aaPredicted RBP16.48■□□□□ 0.23
SMC1A-204ENST00000463684 MTHFRP42898 656 aa16.48■□□□□ 0.23
SMC1A-204ENST00000463684 ITGB3BPQ13352 177 aaPredicted RBP16.48■□□□□ 0.23
SMC1A-204ENST00000463684 PDXDC2PQ6P474 469 aa16.48■□□□□ 0.23
SMC1A-204ENST00000463684 ABHD15Q6UXT9 468 aa16.48■□□□□ 0.23
SMC1A-204ENST00000463684 LRRC55Q6ZSA7 311 aa16.48■□□□□ 0.23
SMC1A-204ENST00000463684 FAM228AQ86W67 206 aa16.48■□□□□ 0.23
SMC1A-204ENST00000463684 LRRC43Q8N309 656 aa16.48■□□□□ 0.23
SMC1A-204ENST00000463684 MRPL43Q8N983 215 aaKnown RBP16.48■□□□□ 0.23
SMC1A-204ENST00000463684 TMEM87AQ8NBN3 555 aa16.48■□□□□ 0.23
SMC1A-204ENST00000463684 NKD2Q969F2 451 aaPredicted RBP16.48■□□□□ 0.23
SMC1A-204ENST00000463684 TMEM87BQ96K49 555 aa16.48■□□□□ 0.23
SMC1A-204ENST00000463684 CASD1Q96PB1 797 aa16.48■□□□□ 0.23
SMC1A-204ENST00000463684 OSMRQ99650 979 aa16.48■□□□□ 0.23
SMC1A-204ENST00000463684 ZNF302Q9NR11 478 aa16.48■□□□□ 0.23
SMC1A-204ENST00000463684 HCFC2Q9Y5Z7 792 aa16.48■□□□□ 0.23
SMC1A-204ENST00000463684 DDX39AO00148 427 aaKnown RBP16.47■□□□□ 0.23
SMC1A-204ENST00000463684 RXRAP19793 462 aa16.47■□□□□ 0.23
SMC1A-204ENST00000463684 CHMLP26374 656 aa16.47■□□□□ 0.23
SMC1A-204ENST00000463684 MCM5P33992 734 aa16.47■□□□□ 0.23
SMC1A-204ENST00000463684 CA8P35219 290 aa16.47■□□□□ 0.23
SMC1A-204ENST00000463684 ZNF76P36508 570 aa16.47■□□□□ 0.23
SMC1A-204ENST00000463684 MCTP2Q6DN12 878 aa16.47■□□□□ 0.23
SMC1A-204ENST00000463684 SWSAP1Q6NVH7 229 aa16.47■□□□□ 0.23
SMC1A-204ENST00000463684 MIS18BP1Q6P0N0 1132 aa16.47■□□□□ 0.23
SMC1A-204ENST00000463684 ERMP1Q7Z2K6 904 aa16.47■□□□□ 0.23
SMC1A-204ENST00000463684 CKAP2LQ8IYA6 745 aa16.47■□□□□ 0.23
SMC1A-204ENST00000463684 PLCD3Q8N3E9 789 aa16.47■□□□□ 0.23
SMC1A-204ENST00000463684 METTL13Q8N6R0 699 aa16.47■□□□□ 0.23
SMC1A-204ENST00000463684 CDH22Q9UJ99 828 aa16.47■□□□□ 0.23
SMC1A-204ENST00000463684 SLC12A7Q9Y666 1083 aa16.47■□□□□ 0.23
SMC1A-204ENST00000463684 MEIS1O00470 390 aa16.46■□□□□ 0.23
SMC1A-204ENST00000463684 VTNP04004 478 aa16.46■□□□□ 0.23
SMC1A-204ENST00000463684 PBX3P40426 434 aa16.46■□□□□ 0.23
SMC1A-204ENST00000463684 CLCN5P51795 746 aa16.46■□□□□ 0.23
SMC1A-204ENST00000463684 DSC3Q14574 896 aa16.46■□□□□ 0.23
SMC1A-204ENST00000463684 ATAT1Q5SQI0 421 aa16.46■□□□□ 0.23
SMC1A-204ENST00000463684 TTC22Q5TAA0 569 aa16.46■□□□□ 0.23
SMC1A-204ENST00000463684 TEX2Q8IWB9 1127 aa16.46■□□□□ 0.23
SMC1A-204ENST00000463684 ZDHHC14Q8IZN3 488 aa16.46■□□□□ 0.23
SMC1A-204ENST00000463684 TDRD5Q8NAT2 981 aaKnown RBP16.46■□□□□ 0.23
SMC1A-204ENST00000463684 FANCBQ8NB91 859 aa16.46■□□□□ 0.23
SMC1A-204ENST00000463684 MAP4K1Q92918 833 aa16.46■□□□□ 0.23
SMC1A-204ENST00000463684 RIC8AQ9NPQ8 531 aa16.46■□□□□ 0.23
SMC1A-204ENST00000463684 LIMD1Q9UGP4 676 aa16.46■□□□□ 0.23
SMC1A-204ENST00000463684 C2orf71A6NGG8 1288 aa16.45■□□□□ 0.22
SMC1A-204ENST00000463684 SH2B2O14492 632 aaPredicted RBP16.45■□□□□ 0.22
SMC1A-204ENST00000463684 CLASP2O75122 1294 aaKnown RBP16.45■□□□□ 0.22
SMC1A-204ENST00000463684 GPR32O75388 356 aa16.45■□□□□ 0.22
SMC1A-204ENST00000463684 CXCL14O95715 111 aa16.45■□□□□ 0.22
SMC1A-204ENST00000463684 CCNE2O96020 404 aa16.45■□□□□ 0.22
SMC1A-204ENST00000463684 ASGR2P07307 311 aa16.45■□□□□ 0.22
SMC1A-204ENST00000463684 GSPT1P15170 499 aaKnown RBP16.45■□□□□ 0.22
SMC1A-204ENST00000463684 LIFRP42702 1097 aa16.45■□□□□ 0.22
SMC1A-204ENST00000463684 ID4P47928 161 aa16.45■□□□□ 0.22
SMC1A-204ENST00000463684 NAPAP54920 295 aa16.45■□□□□ 0.22
SMC1A-204ENST00000463684 RARS2Q5T160 578 aaKnown RBP16.45■□□□□ 0.22
SMC1A-204ENST00000463684 FRMD5Q7Z6J6 570 aa16.45■□□□□ 0.22
SMC1A-204ENST00000463684 CCDC60Q8IWA6 550 aaPredicted RBP16.45■□□□□ 0.22
SMC1A-204ENST00000463684 RNF169Q8NCN4 708 aa16.45■□□□□ 0.22
SMC1A-204ENST00000463684 BBXQ8WY36 941 aaPredicted RBP16.45■□□□□ 0.22
SMC1A-204ENST00000463684 PGBD1Q96JS3 809 aa16.45■□□□□ 0.22
SMC1A-204ENST00000463684 DBR1Q9UK59 544 aaKnown RBP16.45■□□□□ 0.22
SMC1A-204ENST00000463684 SGSM2O43147 1006 aa16.44■□□□□ 0.22
SMC1A-204ENST00000463684 C22orf31O95567 290 aa16.44■□□□□ 0.22
SMC1A-204ENST00000463684 WEE2P0C1S8 567 aa16.44■□□□□ 0.22
SMC1A-204ENST00000463684 ALDH7A1P49419 539 aaKnown RBP16.44■□□□□ 0.22
SMC1A-204ENST00000463684 SYNE3Q6ZMZ3 975 aa16.44■□□□□ 0.22
SMC1A-204ENST00000463684 TMTC3Q6ZXV5 915 aa16.44■□□□□ 0.22
SMC1A-204ENST00000463684 NIPA1Q7RTP0 329 aa16.44■□□□□ 0.22
SMC1A-204ENST00000463684 TRMT1LQ7Z2T5 733 aaKnown RBP16.44■□□□□ 0.22
SMC1A-204ENST00000463684 ECHDC2Q86YB7 292 aa16.44■□□□□ 0.22
SMC1A-204ENST00000463684 RAB11FIP4Q86YS3 637 aa16.44■□□□□ 0.22
SMC1A-204ENST00000463684 ADSSL1Q8N142 457 aa16.44■□□□□ 0.22
SMC1A-204ENST00000463684 SLC39A11Q8N1S5 342 aa16.44■□□□□ 0.22
SMC1A-204ENST00000463684 ANO3Q9BYT9 981 aa16.44■□□□□ 0.22
SMC1A-204ENST00000463684 SMOC2Q9H3U7 446 aa16.44■□□□□ 0.22
SMC1A-204ENST00000463684 RNF19AQ9NV58 838 aa16.44■□□□□ 0.22
SMC1A-204ENST00000463684 DZANK1Q9NVP4 752 aa16.44■□□□□ 0.22
SMC1A-204ENST00000463684 AKT3Q9Y243 479 aa16.44■□□□□ 0.22
SMC1A-204ENST00000463684 USTQ9Y2C2 406 aa16.44■□□□□ 0.22
SMC1A-204ENST00000463684 RBM8AQ9Y5S9 174 aaKnown RBP16.44■□□□□ 0.22
SMC1A-204ENST00000463684 MYO15AQ9UKN7 3530 aa16.44■□□□□ 0.22
SMC1A-204ENST00000463684 FNDC1Q4ZHG4 1894 aaPredicted RBP16.44■□□□□ 0.22
SMC1A-204ENST00000463684 ZBTB42B2RXF5 422 aa16.43■□□□□ 0.22
SMC1A-204ENST00000463684 MAGEB2O15479 319 aa16.43■□□□□ 0.22
SMC1A-204ENST00000463684 ATP4AP20648 1035 aa16.43■□□□□ 0.22
SMC1A-204ENST00000463684 TMOD1P28289 359 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms