RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 MLF2Q15773 248 aaPredicted RBP15.56■□□□□ 0.08
C9orf3-211ENST00000463372 FAM43BQ6ZT52 329 aaPredicted RBP15.56■□□□□ 0.08
C9orf3-211ENST00000463372 LRRC43Q8N309 656 aa15.56■□□□□ 0.08
C9orf3-211ENST00000463372 TMEM117Q9H0C3 514 aa15.56■□□□□ 0.08
C9orf3-211ENST00000463372 EPB41L4AQ9HCS5 686 aaPredicted RBP15.56■□□□□ 0.08
C9orf3-211ENST00000463372 IFIT2P09913 472 aaKnown RBP15.55■□□□□ 0.08
C9orf3-211ENST00000463372 GNAT2P19087 354 aa15.55■□□□□ 0.08
C9orf3-211ENST00000463372 TMEM62Q0P6H9 643 aa15.55■□□□□ 0.08
C9orf3-211ENST00000463372 GRIK4Q16099 956 aa15.55■□□□□ 0.08
C9orf3-211ENST00000463372 TMEM266Q2M3C6 531 aa15.55■□□□□ 0.08
C9orf3-211ENST00000463372 STPG1Q5TH74 334 aa15.55■□□□□ 0.08
C9orf3-211ENST00000463372 LRRC55Q6ZSA7 311 aa15.55■□□□□ 0.08
C9orf3-211ENST00000463372 VPS52Q8N1B4 723 aa15.55■□□□□ 0.08
C9orf3-211ENST00000463372 ADAM32Q8TC27 787 aa15.55■□□□□ 0.08
C9orf3-211ENST00000463372 AUTS2Q8WXX7 1259 aa15.55■□□□□ 0.08
C9orf3-211ENST00000463372 CLUAP1Q96AJ1 413 aa15.55■□□□□ 0.08
C9orf3-211ENST00000463372 MYADMQ96S97 322 aa15.55■□□□□ 0.08
C9orf3-211ENST00000463372 ADAM2Q99965 735 aa15.55■□□□□ 0.08
C9orf3-211ENST00000463372 WDR6Q9NNW5 1121 aaKnown RBP15.55■□□□□ 0.08
C9orf3-211ENST00000463372 LTB4R2Q9NPC1 389 aa15.55■□□□□ 0.08
C9orf3-211ENST00000463372 RGS18Q9NS28 235 aa15.55■□□□□ 0.08
C9orf3-211ENST00000463372 TMEM161AQ9NX61 479 aa15.55■□□□□ 0.08
C9orf3-211ENST00000463372 EXOC6BQ9Y2D4 811 aa15.55■□□□□ 0.08
C9orf3-211ENST00000463372 IRAK3Q9Y616 596 aa15.55■□□□□ 0.08
C9orf3-211ENST00000463372 CLUHO75153 1309 aa15.54■□□□□ 0.08
C9orf3-211ENST00000463372 MBLAC1A4D2B0 266 aaPredicted RBP15.54■□□□□ 0.08
C9orf3-211ENST00000463372 HOXA2O43364 376 aa15.54■□□□□ 0.08
C9orf3-211ENST00000463372 METTL7BQ6UX53 244 aa15.54■□□□□ 0.08
C9orf3-211ENST00000463372 RSPO2Q6UXX9 243 aaPredicted RBP15.54■□□□□ 0.08
C9orf3-211ENST00000463372 ABI1Q8IZP0 508 aa15.54■□□□□ 0.08
C9orf3-211ENST00000463372 SLC39A11Q8N1S5 342 aa15.54■□□□□ 0.08
C9orf3-211ENST00000463372 CLASRPQ8N2M8 674 aaKnown RBP15.54■□□□□ 0.08
C9orf3-211ENST00000463372 GPKOWQ92917 476 aaPredicted RBP eCLIP15.54■□□□□ 0.08
C9orf3-211ENST00000463372 TMEM169Q96HH4 297 aa15.54■□□□□ 0.08
C9orf3-211ENST00000463372 PDCD2LQ9BRP1 358 aa15.54■□□□□ 0.08
C9orf3-211ENST00000463372 BCL11AQ9H165 835 aa15.54■□□□□ 0.08
C9orf3-211ENST00000463372 BCAS3Q9H6U6 928 aa15.54■□□□□ 0.08
C9orf3-211ENST00000463372 C1orf115Q9H7X2 142 aa15.54■□□□□ 0.08
C9orf3-211ENST00000463372 LAMA5O15230 3695 aa15.54■□□□□ 0.08
C9orf3-211ENST00000463372 LAMA1P25391 3075 aa15.53■□□□□ 0.08
C9orf3-211ENST00000463372 C9IYK1 514 aa15.53■□□□□ 0.08
C9orf3-211ENST00000463372 MGEA5O60502 916 aa15.53■□□□□ 0.08
C9orf3-211ENST00000463372 CFBP00751 764 aa15.53■□□□□ 0.08
C9orf3-211ENST00000463372 CT47B1P0C2W7 299 aaPredicted RBP15.53■□□□□ 0.08
C9orf3-211ENST00000463372 RPS9P46781 194 aaKnown RBP15.53■□□□□ 0.08
C9orf3-211ENST00000463372 NOVA1P51513 510 aaKnown RBP15.53■□□□□ 0.08
C9orf3-211ENST00000463372 GPC5P78333 572 aa15.53■□□□□ 0.08
C9orf3-211ENST00000463372 ZNF252P-AS1Q0IIN9 211 aa15.53■□□□□ 0.08
C9orf3-211ENST00000463372 HTR4Q13639 388 aa15.53■□□□□ 0.08
C9orf3-211ENST00000463372 NEDD9Q14511 834 aa15.53■□□□□ 0.08
C9orf3-211ENST00000463372 SLC44A4Q53GD3 710 aa15.53■□□□□ 0.08
C9orf3-211ENST00000463372 C19orf48Q6RUI8 117 aa15.53■□□□□ 0.08
C9orf3-211ENST00000463372 CYFIP1Q7L576 1253 aa15.53■□□□□ 0.08
C9orf3-211ENST00000463372 VSIG10LQ86VR7 867 aa15.53■□□□□ 0.08
C9orf3-211ENST00000463372 CLDN23Q96B33 292 aa15.53■□□□□ 0.08
C9orf3-211ENST00000463372 NELL2Q99435 816 aa15.53■□□□□ 0.08
C9orf3-211ENST00000463372 SCNM1Q9BWG6 230 aa15.53■□□□□ 0.08
C9orf3-211ENST00000463372 CELF4Q9BZC1 486 aaKnown RBP15.53■□□□□ 0.08
C9orf3-211ENST00000463372 NACAP1Q9BZK3 213 aa15.53■□□□□ 0.08
C9orf3-211ENST00000463372 ZBP1Q9H171 429 aa15.53■□□□□ 0.08
C9orf3-211ENST00000463372 WASF3Q9UPY6 502 aa15.53■□□□□ 0.08
C9orf3-211ENST00000463372 NUMBLQ9Y6R0 609 aa15.53■□□□□ 0.08
C9orf3-211ENST00000463372 ANHXE9PGG2 379 aa15.52■□□□□ 0.08
C9orf3-211ENST00000463372 PDHBP11177 359 aa15.52■□□□□ 0.08
C9orf3-211ENST00000463372 TOP1P11387 765 aaKnown RBP15.52■□□□□ 0.08
C9orf3-211ENST00000463372 LAMP2P13473 410 aa15.52■□□□□ 0.08
C9orf3-211ENST00000463372 CD72P21854 359 aa15.52■□□□□ 0.08
C9orf3-211ENST00000463372 ALDH7A1P49419 539 aaKnown RBP15.52■□□□□ 0.08
C9orf3-211ENST00000463372 SLFN5Q08AF3 891 aa15.52■□□□□ 0.08
C9orf3-211ENST00000463372 MTAPQ13126 283 aa15.52■□□□□ 0.08
C9orf3-211ENST00000463372 SF3A2Q15428 464 aaKnown RBP15.52■□□□□ 0.08
C9orf3-211ENST00000463372 ODR4Q5SWX8 454 aa15.52■□□□□ 0.08
C9orf3-211ENST00000463372 IFNL3Q8IZI9 196 aa15.52■□□□□ 0.08
C9orf3-211ENST00000463372 GLIS3Q8NEA6 775 aa15.52■□□□□ 0.08
C9orf3-211ENST00000463372 CASD1Q96PB1 797 aa15.52■□□□□ 0.08
C9orf3-211ENST00000463372 ELAC1Q9H777 363 aaKnown RBP15.52■□□□□ 0.08
C9orf3-211ENST00000463372 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.52■□□□□ 0.08
C9orf3-211ENST00000463372 MRPL11Q9Y3B7 192 aaKnown RBP15.52■□□□□ 0.08
C9orf3-211ENST00000463372 USP9XQ93008 2570 aaPredicted RBP15.52■□□□□ 0.07
C9orf3-211ENST00000463372 TENM4Q6N022 2769 aa15.52■□□□□ 0.07
C9orf3-211ENST00000463372 RANBP6O60518 1105 aaKnown RBP15.51■□□□□ 0.07
C9orf3-211ENST00000463372 CTSAP10619 480 aa15.51■□□□□ 0.07
C9orf3-211ENST00000463372 KLRC2P26717 231 aa15.51■□□□□ 0.07
C9orf3-211ENST00000463372 CCND2P30279 289 aa15.51■□□□□ 0.07
C9orf3-211ENST00000463372 METAP2P50579 478 aaKnown RBP eCLIP15.51■□□□□ 0.07
C9orf3-211ENST00000463372 IGBP1P78318 339 aa15.51■□□□□ 0.07
C9orf3-211ENST00000463372 SP4Q02446 784 aa15.51■□□□□ 0.07
C9orf3-211ENST00000463372 PPARAQ07869 468 aa15.51■□□□□ 0.07
C9orf3-211ENST00000463372 ZNF543Q08ER8 600 aa15.51■□□□□ 0.07
C9orf3-211ENST00000463372 PGM5Q15124 567 aa15.51■□□□□ 0.07
C9orf3-211ENST00000463372 CDC37Q16543 378 aaPredicted RBP15.51■□□□□ 0.07
C9orf3-211ENST00000463372 MARCH8Q5T0T0 291 aa15.51■□□□□ 0.07
C9orf3-211ENST00000463372 CYP26C1Q6V0L0 522 aa15.51■□□□□ 0.07
C9orf3-211ENST00000463372 CMASQ8NFW8 434 aaPredicted RBP15.51■□□□□ 0.07
C9orf3-211ENST00000463372 RHPN1Q8TCX5 695 aa15.51■□□□□ 0.07
C9orf3-211ENST00000463372 FREM2Q5SZK8 3169 aa15.51■□□□□ 0.07
C9orf3-211ENST00000463372 TICRRQ7Z2Z1 1910 aa15.51■□□□□ 0.07
C9orf3-211ENST00000463372 ASXL3Q9C0F0 2248 aa15.5■□□□□ 0.07
C9orf3-211ENST00000463372 CCDC195A0A1B0GUA6 201 aa15.5■□□□□ 0.07
C9orf3-211ENST00000463372 PATL2C9JE40 543 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms