RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 TARBP1Q13395 1621 aaKnown RBP16.95■□□□□ 0.3
SMC4-204ENST00000462787 GLI2P10070 1586 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 MGEA5O60502 916 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 HNRNPCP07910 306 aaKnown RBP eCLIP16.95■□□□□ 0.3
SMC4-204ENST00000462787 KRT3P12035 628 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 SCP2P22307 547 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 PCGF5Q86SE9 256 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 CXorf38Q8TB03 319 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 ANKRD27Q96NW4 1050 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 TTC1Q99614 292 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 DNAJC7Q99615 494 aa16.95■□□□□ 0.3
SMC4-204ENST00000462787 ZNF219Q9P2Y4 722 aaPredicted RBP16.95■□□□□ 0.3
SMC4-204ENST00000462787 PPP1R3GB7ZBB8 358 aa16.94■□□□□ 0.3
SMC4-204ENST00000462787 APOEP02649 317 aa16.94■□□□□ 0.3
SMC4-204ENST00000462787 HSD17B3P37058 310 aa16.94■□□□□ 0.3
SMC4-204ENST00000462787 TXNRD1Q16881 649 aa16.94■□□□□ 0.3
SMC4-204ENST00000462787 CNPY4Q8N129 248 aa16.94■□□□□ 0.3
SMC4-204ENST00000462787 EFCAB6Q5THR3 1501 aa16.94■□□□□ 0.3
SMC4-204ENST00000462787 QRICH2Q9H0J4 1663 aa16.94■□□□□ 0.3
SMC4-204ENST00000462787 GHRP10912 638 aa16.94■□□□□ 0.3
SMC4-204ENST00000462787 BASP1P80723 227 aaKnown RBP16.94■□□□□ 0.3
SMC4-204ENST00000462787 NACC1Q96RE7 527 aa16.94■□□□□ 0.3
SMC4-204ENST00000462787 GGT7Q9UJ14 662 aa16.94■□□□□ 0.3
SMC4-204ENST00000462787 SMG5Q9UPR3 1016 aaKnown RBP16.94■□□□□ 0.3
SMC4-204ENST00000462787 CFAP69A5D8W1 941 aa16.94■□□□□ 0.3
SMC4-204ENST00000462787 TULP2O00295 520 aa16.94■□□□□ 0.3
SMC4-204ENST00000462787 ANP32DO95626 131 aa16.94■□□□□ 0.3
SMC4-204ENST00000462787 POLR2MP0CAP2 368 aa16.94■□□□□ 0.3
SMC4-204ENST00000462787 DMP1Q13316 513 aaPredicted RBP16.94■□□□□ 0.3
SMC4-204ENST00000462787 CCDC92Q53HC0 331 aaPredicted RBP16.94■□□□□ 0.3
SMC4-204ENST00000462787 ICA1LQ8NDH6 482 aa16.94■□□□□ 0.3
SMC4-204ENST00000462787 APOBEC2Q9Y235 224 aaKnown RBP16.94■□□□□ 0.3
SMC4-204ENST00000462787 CCDC22O60826 627 aa16.94■□□□□ 0.3
SMC4-204ENST00000462787 TJP3O95049 919 aa16.94■□□□□ 0.3
SMC4-204ENST00000462787 FSBPO95073 299 aa16.94■□□□□ 0.3
SMC4-204ENST00000462787 MYCLP12524 364 aaPredicted RBP16.94■□□□□ 0.3
SMC4-204ENST00000462787 ART3Q13508 389 aa16.94■□□□□ 0.3
SMC4-204ENST00000462787 NAB2Q15742 525 aa16.94■□□□□ 0.3
SMC4-204ENST00000462787 ENAHQ8N8S7 591 aaPredicted RBP16.94■□□□□ 0.3
SMC4-204ENST00000462787 TMBIM4Q9HC24 238 aa16.94■□□□□ 0.3
SMC4-204ENST00000462787 ANLNQ9NQW6 1124 aa16.94■□□□□ 0.3
SMC4-204ENST00000462787 GINM1Q9NU53 330 aa16.94■□□□□ 0.3
SMC4-204ENST00000462787 MID2Q9UJV3 735 aa16.94■□□□□ 0.3
SMC4-204ENST00000462787 NQO1P15559 274 aaKnown RBP16.93■□□□□ 0.3
SMC4-204ENST00000462787 NCF2P19878 526 aaPredicted RBP16.93■□□□□ 0.3
SMC4-204ENST00000462787 ALCAMQ13740 583 aa16.93■□□□□ 0.3
SMC4-204ENST00000462787 KRT39Q6A163 491 aa16.93■□□□□ 0.3
SMC4-204ENST00000462787 TTC16Q8NEE8 873 aa16.93■□□□□ 0.3
SMC4-204ENST00000462787 AMNQ9BXJ7 453 aa16.93■□□□□ 0.3
SMC4-204ENST00000462787 PCDHB4Q9Y5E5 795 aa16.93■□□□□ 0.3
SMC4-204ENST00000462787 SALL3Q9BXA9 1300 aa16.93■□□□□ 0.3
SMC4-204ENST00000462787 PIK3CAP42336 1068 aa16.93■□□□□ 0.3
SMC4-204ENST00000462787 CTCFP49711 727 aaPredicted RBP16.93■□□□□ 0.3
SMC4-204ENST00000462787 DEPTORQ8TB45 409 aa16.93■□□□□ 0.3
SMC4-204ENST00000462787 KIF9Q9HAQ2 790 aa16.93■□□□□ 0.3
SMC4-204ENST00000462787 SMARCAL1Q9NZC9 954 aa16.93■□□□□ 0.3
SMC4-204ENST00000462787 NR3C1P04150 777 aa16.93■□□□□ 0.3
SMC4-204ENST00000462787 FGFR4P22455 802 aa16.93■□□□□ 0.3
SMC4-204ENST00000462787 GUCY1A2P33402 732 aa16.93■□□□□ 0.3
SMC4-204ENST00000462787 XKR9Q5GH70 373 aa16.93■□□□□ 0.3
SMC4-204ENST00000462787 FSCBQ5H9T9 825 aa16.93■□□□□ 0.3
SMC4-204ENST00000462787 SWT1Q5T5J6 900 aaKnown RBP16.93■□□□□ 0.3
SMC4-204ENST00000462787 RGS9BPQ6ZS82 235 aa16.93■□□□□ 0.3
SMC4-204ENST00000462787 TEKT4Q8WW24 435 aa16.93■□□□□ 0.3
SMC4-204ENST00000462787 TAF6LQ9Y6J9 622 aa16.93■□□□□ 0.3
SMC4-204ENST00000462787 CDC42BPAQ5VT25 1732 aa16.93■□□□□ 0.3
SMC4-204ENST00000462787 CDH16O75309 829 aa16.93■□□□□ 0.3
SMC4-204ENST00000462787 NAIF1Q69YI7 327 aaPredicted RBP16.93■□□□□ 0.3
SMC4-204ENST00000462787 SYDE1Q6ZW31 735 aaPredicted RBP16.93■□□□□ 0.3
SMC4-204ENST00000462787 CHURC1Q8WUH1 139 aa16.93■□□□□ 0.3
SMC4-204ENST00000462787 POMGNT1Q8WZA1 660 aa16.93■□□□□ 0.3
SMC4-204ENST00000462787 RAPGEF5Q92565 580 aa16.93■□□□□ 0.3
SMC4-204ENST00000462787 TRIM9Q9C026 710 aa16.93■□□□□ 0.3
SMC4-204ENST00000462787 PDP2Q9P2J9 529 aa16.93■□□□□ 0.3
SMC4-204ENST00000462787 TRAF3IP3Q9Y228 551 aa16.93■□□□□ 0.3
SMC4-204ENST00000462787 ABCA6Q8N139 1617 aa16.92■□□□□ 0.3
SMC4-204ENST00000462787 MARK3P27448 753 aa16.92■□□□□ 0.3
SMC4-204ENST00000462787 PGM1P36871 562 aa16.92■□□□□ 0.3
SMC4-204ENST00000462787 RCSD1Q6JBY9 416 aa16.92■□□□□ 0.3
SMC4-204ENST00000462787 SCYL2Q6P3W7 929 aa16.92■□□□□ 0.3
SMC4-204ENST00000462787 FOXR1Q6PIV2 292 aa16.92■□□□□ 0.3
SMC4-204ENST00000462787 RBM41Q96IZ5 413 aaKnown RBP16.92■□□□□ 0.3
SMC4-204ENST00000462787 ERGIC2Q96RQ1 377 aa16.92■□□□□ 0.3
SMC4-204ENST00000462787 MRPL11Q9Y3B7 192 aaKnown RBP16.92■□□□□ 0.3
SMC4-204ENST00000462787 SPHKAPQ2M3C7 1700 aa16.92■□□□□ 0.3
SMC4-204ENST00000462787 KRT19P08727 400 aa16.92■□□□□ 0.3
SMC4-204ENST00000462787 RFX1P22670 979 aa16.92■□□□□ 0.3
SMC4-204ENST00000462787 CSRNP1Q96S65 589 aa16.92■□□□□ 0.3
SMC4-204ENST00000462787 PHF2O75151 1096 aa16.92■□□□□ 0.3
SMC4-204ENST00000462787 ACADSP16219 412 aa16.92■□□□□ 0.3
SMC4-204ENST00000462787 BTDP43251 543 aa16.92■□□□□ 0.3
SMC4-204ENST00000462787 PTPAQ15257 358 aa16.92■□□□□ 0.3
SMC4-204ENST00000462787 NAALADL2Q58DX5 795 aa16.92■□□□□ 0.3
SMC4-204ENST00000462787 CNBD1Q8NA66 436 aa16.92■□□□□ 0.3
SMC4-204ENST00000462787 WDR11Q9BZH6 1224 aa16.92■□□□□ 0.3
SMC4-204ENST00000462787 ANKARQ7Z5J8 1434 aa16.92■□□□□ 0.3
SMC4-204ENST00000462787 MYCNP04198 464 aaPredicted RBP16.92■□□□□ 0.3
SMC4-204ENST00000462787 FCER1AP12319 257 aa16.92■□□□□ 0.3
SMC4-204ENST00000462787 DNAJC24Q6P3W2 148 aa16.92■□□□□ 0.3
SMC4-204ENST00000462787 COL23A1Q86Y22 540 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms