RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 MCM7P33993 719 aa21.18■□□□□ 0.98
SLC6A1-204ENST00000462473 NLRP11P59045 1033 aaKnown RBP21.18■□□□□ 0.98
SLC6A1-204ENST00000462473 SPIRE1Q08AE8 756 aa21.18■□□□□ 0.98
SLC6A1-204ENST00000462473 ANO5Q75V66 913 aa21.18■□□□□ 0.98
SLC6A1-204ENST00000462473 SPRED2Q7Z698 418 aa21.18■□□□□ 0.98
SLC6A1-204ENST00000462473 ZNF710Q8N1W2 664 aa21.18■□□□□ 0.98
SLC6A1-204ENST00000462473 PPM1EQ8WY54 764 aa21.18■□□□□ 0.98
SLC6A1-204ENST00000462473 DYDC2Q96IM9 177 aa21.18■□□□□ 0.98
SLC6A1-204ENST00000462473 TGS1Q96RS0 853 aaKnown RBP21.18■□□□□ 0.98
SLC6A1-204ENST00000462473 LXNQ9BS40 222 aa21.18■□□□□ 0.98
SLC6A1-204ENST00000462473 TTC12Q9H892 705 aaPredicted RBP21.18■□□□□ 0.98
SLC6A1-204ENST00000462473 RGL1Q9NZL6 768 aa21.18■□□□□ 0.98
SLC6A1-204ENST00000462473 MTUS1Q9ULD2 1270 aa21.18■□□□□ 0.98
SLC6A1-204ENST00000462473 EPOPA6NHQ4 379 aa21.17■□□□□ 0.98
SLC6A1-204ENST00000462473 DNM2P50570 870 aa21.17■□□□□ 0.98
SLC6A1-204ENST00000462473 RTN4RL1Q86UN2 441 aaPredicted RBP21.17■□□□□ 0.98
SLC6A1-204ENST00000462473 NOSTRINQ8IVI9 506 aa21.17■□□□□ 0.98
SLC6A1-204ENST00000462473 SCLT1Q96NL6 688 aa21.17■□□□□ 0.98
SLC6A1-204ENST00000462473 ST3GAL5Q9UNP4 418 aa21.17■□□□□ 0.98
SLC6A1-204ENST00000462473 EVPLQ92817 2033 aa21.17■□□□□ 0.98
SLC6A1-204ENST00000462473 MYO9BQ13459 2157 aa21.17■□□□□ 0.98
SLC6A1-204ENST00000462473 LAMA2P24043 3122 aaKnown RBP21.17■□□□□ 0.98
SLC6A1-204ENST00000462473 WDR81Q562E7 1941 aa21.16■□□□□ 0.98
SLC6A1-204ENST00000462473 ERVK-21P61565 698 aa21.16■□□□□ 0.98
SLC6A1-204ENST00000462473 CYP4A11Q02928 519 aa21.16■□□□□ 0.98
SLC6A1-204ENST00000462473 CTTNQ14247 550 aaKnown RBP21.16■□□□□ 0.98
SLC6A1-204ENST00000462473 ZNF174Q15697 407 aa21.16■□□□□ 0.98
SLC6A1-204ENST00000462473 PLA2G4FQ68DD2 849 aa21.16■□□□□ 0.98
SLC6A1-204ENST00000462473 FAM43BQ6ZT52 329 aaPredicted RBP21.16■□□□□ 0.98
SLC6A1-204ENST00000462473 OTUD6AQ7L8S5 288 aa21.16■□□□□ 0.98
SLC6A1-204ENST00000462473 TPH2Q8IWU9 490 aa21.16■□□□□ 0.98
SLC6A1-204ENST00000462473 C4orf19Q8IY42 314 aa21.16■□□□□ 0.98
SLC6A1-204ENST00000462473 SP7Q8TDD2 431 aaPredicted RBP21.16■□□□□ 0.98
SLC6A1-204ENST00000462473 LINC01599Q8WXQ3 324 aa21.16■□□□□ 0.98
SLC6A1-204ENST00000462473 ZNF668Q96K58 619 aaPredicted RBP21.16■□□□□ 0.98
SLC6A1-204ENST00000462473 MTMR9Q96QG7 549 aa21.16■□□□□ 0.98
SLC6A1-204ENST00000462473 CEP89Q96ST8 783 aa21.16■□□□□ 0.98
SLC6A1-204ENST00000462473 JPH2Q9BR39 696 aaPredicted RBP21.16■□□□□ 0.98
SLC6A1-204ENST00000462473 BACH2Q9BYV9 841 aa21.16■□□□□ 0.98
SLC6A1-204ENST00000462473 TSPYL2Q9H2G4 693 aaPredicted RBP21.16■□□□□ 0.98
SLC6A1-204ENST00000462473 TMEM60Q9H2L4 133 aa21.16■□□□□ 0.98
SLC6A1-204ENST00000462473 ZSWIM4Q9H7M6 989 aa21.16■□□□□ 0.98
SLC6A1-204ENST00000462473 ERVK-5Q9HDB9 667 aa21.16■□□□□ 0.98
SLC6A1-204ENST00000462473 CYP26B1Q9NR63 512 aa21.16■□□□□ 0.98
SLC6A1-204ENST00000462473 WRAP73Q9P2S5 460 aaPredicted RBP21.16■□□□□ 0.98
SLC6A1-204ENST00000462473 NOL7Q9UMY1 257 aaKnown RBP21.16■□□□□ 0.98
SLC6A1-204ENST00000462473 IGKV6-21A0A0C4DH24 114 aa21.15■□□□□ 0.98
SLC6A1-204ENST00000462473 GTPBP6O43824 516 aaPredicted RBP21.15■□□□□ 0.98
SLC6A1-204ENST00000462473 MAFO75444 373 aaPredicted RBP21.15■□□□□ 0.98
SLC6A1-204ENST00000462473 YWHABP31946 246 aaKnown RBP21.15■□□□□ 0.98
SLC6A1-204ENST00000462473 GPC3P51654 580 aa21.15■□□□□ 0.98
SLC6A1-204ENST00000462473 NPEPPSP55786 919 aa21.15■□□□□ 0.98
SLC6A1-204ENST00000462473 CDC42EP1Q00587 391 aa21.15■□□□□ 0.98
SLC6A1-204ENST00000462473 CCDC85BQ15834 202 aaPredicted RBP21.15■□□□□ 0.98
SLC6A1-204ENST00000462473 FAM228AQ86W67 206 aa21.15■□□□□ 0.98
SLC6A1-204ENST00000462473 CEP170P1Q96L14 293 aa21.15■□□□□ 0.98
SLC6A1-204ENST00000462473 EIF2AK1Q9BQI3 630 aaKnown RBP21.15■□□□□ 0.98
SLC6A1-204ENST00000462473 ADAMTS10Q9H324 1103 aa21.15■□□□□ 0.98
SLC6A1-204ENST00000462473 TMX1Q9H3N1 280 aa21.15■□□□□ 0.98
SLC6A1-204ENST00000462473 DENND3A2RUS2 1198 aa21.14■□□□□ 0.97
SLC6A1-204ENST00000462473 SLITRK3O94933 977 aa21.14■□□□□ 0.97
SLC6A1-204ENST00000462473 STAG3L1P0CL83 205 aa21.14■□□□□ 0.97
SLC6A1-204ENST00000462473 IBSPP21815 317 aaPredicted RBP21.14■□□□□ 0.97
SLC6A1-204ENST00000462473 GJB2P29033 226 aa21.14■□□□□ 0.97
SLC6A1-204ENST00000462473 ORC2Q13416 577 aaPredicted RBP21.14■□□□□ 0.97
SLC6A1-204ENST00000462473 DRP2Q13474 957 aa21.14■□□□□ 0.97
SLC6A1-204ENST00000462473 TTC38Q5R3I4 469 aa21.14■□□□□ 0.97
SLC6A1-204ENST00000462473 MICALL1Q8N3F8 863 aa21.14■□□□□ 0.97
SLC6A1-204ENST00000462473 NLRP7Q8WX94 980 aa21.14■□□□□ 0.97
SLC6A1-204ENST00000462473 PPME1Q9Y570 386 aa21.14■□□□□ 0.97
SLC6A1-204ENST00000462473 GTF3C3Q9Y5Q9 886 aa21.14■□□□□ 0.97
SLC6A1-204ENST00000462473 EIF4BP23588 611 aaKnown RBP21.13■□□□□ 0.97
SLC6A1-204ENST00000462473 U2AF2P26368 475 aaKnown RBP eCLIP21.13■□□□□ 0.97
SLC6A1-204ENST00000462473 TRAPPC10P48553 1259 aa21.13■□□□□ 0.97
SLC6A1-204ENST00000462473 POLGP54098 1239 aaPredicted RBP21.13■□□□□ 0.97
SLC6A1-204ENST00000462473 GRB10Q13322 594 aa21.13■□□□□ 0.97
SLC6A1-204ENST00000462473 XKR9Q5GH70 373 aa21.13■□□□□ 0.97
SLC6A1-204ENST00000462473 NPAS4Q8IUM7 802 aa21.13■□□□□ 0.97
SLC6A1-204ENST00000462473 EXOC8Q8IYI6 725 aa21.13■□□□□ 0.97
SLC6A1-204ENST00000462473 FIBCD1Q8N539 461 aa21.13■□□□□ 0.97
SLC6A1-204ENST00000462473 ZNF579Q8NAF0 562 aaKnown RBP21.13■□□□□ 0.97
SLC6A1-204ENST00000462473 NEK9Q8TD19 979 aa21.13■□□□□ 0.97
SLC6A1-204ENST00000462473 SLC7A3Q8WY07 619 aa21.13■□□□□ 0.97
SLC6A1-204ENST00000462473 ADAM2Q99965 735 aa21.13■□□□□ 0.97
SLC6A1-204ENST00000462473 HSD17B14Q9BPX1 270 aa21.13■□□□□ 0.97
SLC6A1-204ENST00000462473 C17orf80Q9BSJ5 609 aa21.13■□□□□ 0.97
SLC6A1-204ENST00000462473 SUCLA2Q9P2R7 463 aaPredicted RBP21.13■□□□□ 0.97
SLC6A1-204ENST00000462473 LRFN2Q9ULH4 789 aa21.13■□□□□ 0.97
SLC6A1-204ENST00000462473 SMC3Q9UQE7 1217 aa21.13■□□□□ 0.97
SLC6A1-204ENST00000462473 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.13■□□□□ 0.97
SLC6A1-204ENST00000462473 MGEA5O60502 916 aa21.12■□□□□ 0.97
SLC6A1-204ENST00000462473 DGKIO75912 1065 aa21.12■□□□□ 0.97
SLC6A1-204ENST00000462473 POU3F3P20264 500 aaPredicted RBP21.12■□□□□ 0.97
SLC6A1-204ENST00000462473 MCTP1Q6DN14 999 aa21.12■□□□□ 0.97
SLC6A1-204ENST00000462473 RHPN2Q8IUC4 686 aa21.12■□□□□ 0.97
SLC6A1-204ENST00000462473 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.12■□□□□ 0.97
SLC6A1-204ENST00000462473 FBXO22Q8NEZ5 403 aa21.12■□□□□ 0.97
SLC6A1-204ENST00000462473 GDPD5Q8WTR4 605 aa21.12■□□□□ 0.97
SLC6A1-204ENST00000462473 SAMD11Q96NU1 681 aa21.12■□□□□ 0.97
SLC6A1-204ENST00000462473 RGS18Q9NS28 235 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms