RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 TMTC3Q6ZXV5 915 aa12.37□□□□□ -0.43
CBX3-205ENST00000462165 HEATR3Q7Z4Q2 680 aa12.37□□□□□ -0.43
CBX3-205ENST00000462165 FAM228AQ86W67 206 aa12.37□□□□□ -0.43
CBX3-205ENST00000462165 TCF25Q9BQ70 676 aa12.37□□□□□ -0.43
CBX3-205ENST00000462165 ATP6V0A4Q9HBG4 840 aa12.37□□□□□ -0.43
CBX3-205ENST00000462165 NGRNQ9NPE2 291 aaKnown RBP12.37□□□□□ -0.43
CBX3-205ENST00000462165 PUF60Q9UHX1 559 aaKnown RBP12.37□□□□□ -0.43
CBX3-205ENST00000462165 NR2E1Q9Y466 385 aa12.37□□□□□ -0.43
CBX3-205ENST00000462165 RBM8AQ9Y5S9 174 aaKnown RBP12.37□□□□□ -0.43
CBX3-205ENST00000462165 HIDE1A8MVS5 230 aa12.36□□□□□ -0.43
CBX3-205ENST00000462165 H0Y858 1186 aa12.36□□□□□ -0.43
CBX3-205ENST00000462165 MEIS1O00470 390 aa12.36□□□□□ -0.43
CBX3-205ENST00000462165 FOSP01100 380 aaPredicted RBP12.36□□□□□ -0.43
CBX3-205ENST00000462165 PDGFBP01127 241 aaPredicted RBP12.36□□□□□ -0.43
CBX3-205ENST00000462165 FGFR1P11362 822 aa12.36□□□□□ -0.43
CBX3-205ENST00000462165 CRYBB1P53674 252 aaPredicted RBP12.36□□□□□ -0.43
CBX3-205ENST00000462165 APOBRQ0VD83 1088 aa12.36□□□□□ -0.43
CBX3-205ENST00000462165 DSC3Q14574 896 aa12.36□□□□□ -0.43
CBX3-205ENST00000462165 ZNF484Q5JVG2 852 aa12.36□□□□□ -0.43
CBX3-205ENST00000462165 FAM160B1Q5W0V3 765 aa12.36□□□□□ -0.43
CBX3-205ENST00000462165 ZBTB33Q86T24 672 aa12.36□□□□□ -0.43
CBX3-205ENST00000462165 CCDC60Q8IWA6 550 aaPredicted RBP12.36□□□□□ -0.43
CBX3-205ENST00000462165 CCDC82Q8N4S0 544 aa12.36□□□□□ -0.43
CBX3-205ENST00000462165 FANCBQ8NB91 859 aa12.36□□□□□ -0.43
CBX3-205ENST00000462165 EXOC6Q8TAG9 804 aa12.36□□□□□ -0.43
CBX3-205ENST00000462165 CASD1Q96PB1 797 aa12.36□□□□□ -0.43
CBX3-205ENST00000462165 ANO3Q9BYT9 981 aa12.36□□□□□ -0.43
CBX3-205ENST00000462165 TMEM117Q9H0C3 514 aa12.36□□□□□ -0.43
CBX3-205ENST00000462165 ENTPD7Q9NQZ7 604 aa12.36□□□□□ -0.43
CBX3-205ENST00000462165 ZBTB42B2RXF5 422 aa12.35□□□□□ -0.43
CBX3-205ENST00000462165 BACH1O14867 736 aa12.35□□□□□ -0.43
CBX3-205ENST00000462165 HOXA2O43364 376 aa12.35□□□□□ -0.43
CBX3-205ENST00000462165 GALR2O43603 387 aaPredicted RBP12.35□□□□□ -0.43
CBX3-205ENST00000462165 GPR32O75388 356 aa12.35□□□□□ -0.43
CBX3-205ENST00000462165 CCNE2O96020 404 aa12.35□□□□□ -0.43
CBX3-205ENST00000462165 PPM1AP35813 382 aa12.35□□□□□ -0.43
CBX3-205ENST00000462165 COL9A3Q14050 684 aaPredicted RBP12.35□□□□□ -0.43
CBX3-205ENST00000462165 WWC2Q6AWC2 1192 aa12.35□□□□□ -0.43
CBX3-205ENST00000462165 TYW1BQ6NUM6 668 aa12.35□□□□□ -0.43
CBX3-205ENST00000462165 PPP1R18Q6NYC8 613 aa12.35□□□□□ -0.43
CBX3-205ENST00000462165 LLGL2Q6P1M3 1020 aa12.35□□□□□ -0.43
CBX3-205ENST00000462165 KCNT2Q6UVM3 1135 aa12.35□□□□□ -0.43
CBX3-205ENST00000462165 LRRC55Q6ZSA7 311 aa12.35□□□□□ -0.43
CBX3-205ENST00000462165 NIPA1Q7RTP0 329 aa12.35□□□□□ -0.43
CBX3-205ENST00000462165 SGMS1Q86VZ5 419 aa12.35□□□□□ -0.43
CBX3-205ENST00000462165 RAB11FIP4Q86YS3 637 aa12.35□□□□□ -0.43
CBX3-205ENST00000462165 UBALD2Q8IYN6 164 aa12.35□□□□□ -0.43
CBX3-205ENST00000462165 KREMEN2Q8NCW0 462 aa12.35□□□□□ -0.43
CBX3-205ENST00000462165 CASP10Q92851 521 aa12.35□□□□□ -0.43
CBX3-205ENST00000462165 PGBD1Q96JS3 809 aa12.35□□□□□ -0.43
CBX3-205ENST00000462165 OSMRQ99650 979 aa12.35□□□□□ -0.43
CBX3-205ENST00000462165 APOL5Q9BWW9 433 aa12.35□□□□□ -0.43
CBX3-205ENST00000462165 RIC8AQ9NPQ8 531 aa12.35□□□□□ -0.43
CBX3-205ENST00000462165 ZNF302Q9NR11 478 aa12.35□□□□□ -0.43
CBX3-205ENST00000462165 RNF19AQ9NV58 838 aa12.35□□□□□ -0.43
CBX3-205ENST00000462165 SORCS3Q9UPU3 1222 aa12.35□□□□□ -0.43
CBX3-205ENST00000462165 SLC12A7Q9Y666 1083 aa12.35□□□□□ -0.43
CBX3-205ENST00000462165 DDX39AO00148 427 aaKnown RBP12.34□□□□□ -0.43
CBX3-205ENST00000462165 C22orf31O95567 290 aa12.34□□□□□ -0.43
CBX3-205ENST00000462165 CD44P16070 742 aaKnown RBP12.34□□□□□ -0.43
CBX3-205ENST00000462165 ATP4AP20648 1035 aa12.34□□□□□ -0.43
CBX3-205ENST00000462165 SP100P23497 879 aaPredicted RBP12.34□□□□□ -0.43
CBX3-205ENST00000462165 SREBF1P36956 1147 aa12.34□□□□□ -0.43
CBX3-205ENST00000462165 NAPAP54920 295 aa12.34□□□□□ -0.43
CBX3-205ENST00000462165 FOXK2Q01167 660 aa12.34□□□□□ -0.43
CBX3-205ENST00000462165 KRT17Q04695 432 aa12.34□□□□□ -0.43
CBX3-205ENST00000462165 ITIH3Q06033 890 aa12.34□□□□□ -0.43
CBX3-205ENST00000462165 AP3B2Q13367 1082 aa12.34□□□□□ -0.43
CBX3-205ENST00000462165 MTMR3Q13615 1198 aa12.34□□□□□ -0.43
CBX3-205ENST00000462165 KIZQ2M2Z5 673 aa12.34□□□□□ -0.43
CBX3-205ENST00000462165 TPRNQ4KMQ1 711 aa12.34□□□□□ -0.43
CBX3-205ENST00000462165 CES5AQ6NT32 575 aa12.34□□□□□ -0.43
CBX3-205ENST00000462165 PDXDC2PQ6P474 469 aa12.34□□□□□ -0.43
CBX3-205ENST00000462165 TMC7Q7Z402 723 aa12.34□□□□□ -0.43
CBX3-205ENST00000462165 LRRC43Q8N309 656 aa12.34□□□□□ -0.43
CBX3-205ENST00000462165 ZNF558Q96NG5 402 aa12.34□□□□□ -0.43
CBX3-205ENST00000462165 NECTIN4Q96NY8 510 aa12.34□□□□□ -0.43
CBX3-205ENST00000462165 PPP1R16BQ96T49 567 aa12.34□□□□□ -0.43
CBX3-205ENST00000462165 ADAM7Q9H2U9 754 aa12.34□□□□□ -0.43
CBX3-205ENST00000462165 POMKQ9H5K3 350 aa12.34□□□□□ -0.43
CBX3-205ENST00000462165 SPTBN4Q9H254 2564 aa12.34□□□□□ -0.43
CBX3-205ENST00000462165 CNTNAP5Q8WYK1 1306 aa12.34□□□□□ -0.43
CBX3-205ENST00000462165 DENND4AQ7Z401 1863 aa12.34□□□□□ -0.43
CBX3-205ENST00000462165 C2CD4DB7Z1M9 353 aa12.33□□□□□ -0.44
CBX3-205ENST00000462165 hCG_1984214I3L0E3 225 aa12.33□□□□□ -0.44
CBX3-205ENST00000462165 DHX15O43143 795 aaKnown RBP12.33□□□□□ -0.44
CBX3-205ENST00000462165 BRD1O95696 1058 aa12.33□□□□□ -0.44
CBX3-205ENST00000462165 VTNP04004 478 aa12.33□□□□□ -0.44
CBX3-205ENST00000462165 ZNF76P36508 570 aa12.33□□□□□ -0.44
CBX3-205ENST00000462165 NBL1P41271 181 aa12.33□□□□□ -0.44
CBX3-205ENST00000462165 CLK2P49760 499 aaKnown RBP12.33□□□□□ -0.44
CBX3-205ENST00000462165 ADCY7P51828 1080 aa12.33□□□□□ -0.44
CBX3-205ENST00000462165 SMC1AQ14683 1233 aaKnown RBP12.33□□□□□ -0.44
CBX3-205ENST00000462165 SWSAP1Q6NVH7 229 aa12.33□□□□□ -0.44
CBX3-205ENST00000462165 MIS18BP1Q6P0N0 1132 aa12.33□□□□□ -0.44
CBX3-205ENST00000462165 MICU3Q86XE3 530 aa12.33□□□□□ -0.44
CBX3-205ENST00000462165 ZNF713Q8N859 430 aaPredicted RBP12.33□□□□□ -0.44
CBX3-205ENST00000462165 BBXQ8WY36 941 aaPredicted RBP12.33□□□□□ -0.44
CBX3-205ENST00000462165 TSHZ2Q9NRE2 1034 aa12.33□□□□□ -0.44
CBX3-205ENST00000462165 RBM28Q9NW13 759 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms