RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 SARSP49591 514 aaKnown RBP21.35■■□□□ 1.01
VARS-220ENST00000461874 ME3Q16798 604 aa21.35■■□□□ 1.01
VARS-220ENST00000461874 LETM2Q2VYF4 491 aa21.35■■□□□ 1.01
VARS-220ENST00000461874 CMTR2Q8IYT2 770 aaKnown RBP21.35■■□□□ 1.01
VARS-220ENST00000461874 NECAB1Q8N987 351 aa21.35■■□□□ 1.01
VARS-220ENST00000461874 WASF1Q92558 559 aa21.35■■□□□ 1.01
VARS-220ENST00000461874 MAP7D2Q96T17 732 aa21.35■■□□□ 1.01
VARS-220ENST00000461874 C11orf84Q9BUA3 381 aaPredicted RBP21.35■■□□□ 1.01
VARS-220ENST00000461874 EVPLQ92817 2033 aa21.34■■□□□ 1.01
VARS-220ENST00000461874 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.34■■□□□ 1.01
VARS-220ENST00000461874 SLC37A4O43826 429 aa21.34■■□□□ 1.01
VARS-220ENST00000461874 CENPBP07199 599 aaPredicted RBP21.34■■□□□ 1.01
VARS-220ENST00000461874 TARBP2Q15633 366 aaKnown RBP21.34■■□□□ 1.01
VARS-220ENST00000461874 TIGD5Q53EQ6 642 aa21.34■■□□□ 1.01
VARS-220ENST00000461874 PPP4R3AQ6IN85 833 aa21.34■■□□□ 1.01
VARS-220ENST00000461874 NEK8Q86SG6 692 aa21.34■■□□□ 1.01
VARS-220ENST00000461874 FAM228AQ86W67 206 aa21.34■■□□□ 1.01
VARS-220ENST00000461874 ZNF710Q8N1W2 664 aa21.34■■□□□ 1.01
VARS-220ENST00000461874 LRRC71Q8N4P6 559 aa21.34■■□□□ 1.01
VARS-220ENST00000461874 BANK1Q8NDB2 785 aa21.34■■□□□ 1.01
VARS-220ENST00000461874 OXER1Q8TDS5 423 aa21.34■■□□□ 1.01
VARS-220ENST00000461874 NECAB3Q96P71 396 aaPredicted RBP21.34■■□□□ 1.01
VARS-220ENST00000461874 ADAM2Q99965 735 aa21.34■■□□□ 1.01
VARS-220ENST00000461874 ADAMTS10Q9H324 1103 aa21.34■■□□□ 1.01
VARS-220ENST00000461874 UBE2ZQ9H832 354 aaPredicted RBP21.34■■□□□ 1.01
VARS-220ENST00000461874 RGS18Q9NS28 235 aa21.34■■□□□ 1.01
VARS-220ENST00000461874 C1orf112Q9NSG2 853 aa21.34■■□□□ 1.01
VARS-220ENST00000461874 LRFN2Q9ULH4 789 aa21.34■■□□□ 1.01
VARS-220ENST00000461874 AKT3Q9Y243 479 aa21.34■■□□□ 1.01
VARS-220ENST00000461874 MRPL42Q9Y6G3 142 aaKnown RBP21.34■■□□□ 1.01
VARS-220ENST00000461874 DENND3A2RUS2 1198 aa21.33■■□□□ 1.01
VARS-220ENST00000461874 STBD1O95210 358 aa21.33■■□□□ 1.01
VARS-220ENST00000461874 LARGE1O95461 756 aa21.33■■□□□ 1.01
VARS-220ENST00000461874 SEC24BO95487 1268 aa21.33■■□□□ 1.01
VARS-220ENST00000461874 FDPSP14324 419 aaKnown RBP21.33■■□□□ 1.01
VARS-220ENST00000461874 NEK4P51957 841 aa21.33■■□□□ 1.01
VARS-220ENST00000461874 NLRP11P59045 1033 aaKnown RBP21.33■■□□□ 1.01
VARS-220ENST00000461874 XKR3Q5GH77 459 aa21.33■■□□□ 1.01
VARS-220ENST00000461874 PIK3AP1Q6ZUJ8 805 aa21.33■■□□□ 1.01
VARS-220ENST00000461874 GTF3C6Q969F1 213 aa21.33■■□□□ 1.01
VARS-220ENST00000461874 FAM20AQ96MK3 541 aa21.33■■□□□ 1.01
VARS-220ENST00000461874 PLVAPQ9BX97 442 aa21.33■■□□□ 1.01
VARS-220ENST00000461874 NIFKQ9BYG3 293 aaKnown RBP21.33■■□□□ 1.01
VARS-220ENST00000461874 MYO7AQ13402 2215 aa21.33■■□□□ 1
VARS-220ENST00000461874 BDP1A6H8Y1 2624 aa21.33■■□□□ 1
VARS-220ENST00000461874 LOXHD1Q8IVV2 1947 aa21.32■■□□□ 1
VARS-220ENST00000461874 C9IYK1 514 aa21.32■■□□□ 1
VARS-220ENST00000461874 GRM6O15303 877 aa21.32■■□□□ 1
VARS-220ENST00000461874 GCFC2P16383 781 aaKnown RBP21.32■■□□□ 1
VARS-220ENST00000461874 TBC1D8BQ0IIM8 1120 aa21.32■■□□□ 1
VARS-220ENST00000461874 SLC24A5Q71RS6 500 aa21.32■■□□□ 1
VARS-220ENST00000461874 LMAN2LQ9H0V9 348 aa21.32■■□□□ 1
VARS-220ENST00000461874 KCNMB3Q9NPA1 279 aa21.32■■□□□ 1
VARS-220ENST00000461874 PCDHB7Q9Y5E2 793 aa21.32■■□□□ 1
VARS-220ENST00000461874 GATMP50440 423 aa21.31■■□□□ 1
VARS-220ENST00000461874 FAM189BP81408 668 aa21.31■■□□□ 1
VARS-220ENST00000461874 PPP2R5CQ13362 524 aa21.31■■□□□ 1
VARS-220ENST00000461874 DSC3Q14574 896 aa21.31■■□□□ 1
VARS-220ENST00000461874 PAN2Q504Q3 1202 aaKnown RBP21.31■■□□□ 1
VARS-220ENST00000461874 TCEAL5Q5H9L2 206 aa21.31■■□□□ 1
VARS-220ENST00000461874 CEP89Q96ST8 783 aa21.31■■□□□ 1
VARS-220ENST00000461874 NAP1L4Q99733 375 aaKnown RBP21.31■■□□□ 1
VARS-220ENST00000461874 NSUN3Q9H649 340 aaKnown RBP21.31■■□□□ 1
VARS-220ENST00000461874 RNF216Q9NWF9 866 aaPredicted RBP21.31■■□□□ 1
VARS-220ENST00000461874 SEPT9Q9UHD8 586 aaPredicted RBP21.31■■□□□ 1
VARS-220ENST00000461874 VAV3Q9UKW4 847 aa21.31■■□□□ 1
VARS-220ENST00000461874 TMEM150BA6NC51 233 aa21.3■■□□□ 1
VARS-220ENST00000461874 EML1O00423 815 aa21.3■■□□□ 1
VARS-220ENST00000461874 CCNT1O60563 726 aaKnown RBP21.3■■□□□ 1
VARS-220ENST00000461874 IBSPP21815 317 aaPredicted RBP21.3■■□□□ 1
VARS-220ENST00000461874 EIF4BP23588 611 aaKnown RBP21.3■■□□□ 1
VARS-220ENST00000461874 GPC3P51654 580 aa21.3■■□□□ 1
VARS-220ENST00000461874 PSMC5P62195 406 aa21.3■■□□□ 1
VARS-220ENST00000461874 MTERF2Q49AM1 385 aa21.3■■□□□ 1
VARS-220ENST00000461874 EARS2Q5JPH6 523 aaKnown RBP21.3■■□□□ 1
VARS-220ENST00000461874 NSUN7Q8NE18 718 aaKnown RBP21.3■■□□□ 1
VARS-220ENST00000461874 P2RX5Q93086 422 aa21.3■■□□□ 1
VARS-220ENST00000461874 RALGAPA2Q2PPJ7 1873 aa21.3■■□□□ 1
VARS-220ENST00000461874 TCF20Q9UGU0 1960 aaKnown RBP21.3■■□□□ 1
VARS-220ENST00000461874 NLRC5Q86WI3 1866 aa21.29■■□□□ 1
VARS-220ENST00000461874 IGKV6-21A0A0C4DH24 114 aa21.29■■□□□ 1
VARS-220ENST00000461874 DDX11L8A8MPP1 907 aa21.29■■□□□ 1
VARS-220ENST00000461874 TBX3O15119 743 aa21.29■■□□□ 1
VARS-220ENST00000461874 KCNA5P22460 613 aa21.29■■□□□ 1
VARS-220ENST00000461874 KRT2P35908 639 aa21.29■■□□□ 1
VARS-220ENST00000461874 COL19A1Q14993 1142 aa21.29■■□□□ 1
VARS-220ENST00000461874 LEXMQ3ZCV2 418 aa21.29■■□□□ 1
VARS-220ENST00000461874 NAALADL2Q58DX5 795 aa21.29■■□□□ 1
VARS-220ENST00000461874 HAS1Q92839 578 aa21.29■■□□□ 1
VARS-220ENST00000461874 TNFRSF25Q93038 417 aa21.29■■□□□ 1
VARS-220ENST00000461874 ZNF668Q96K58 619 aaPredicted RBP21.29■■□□□ 1
VARS-220ENST00000461874 PLAGL2Q9UPG8 496 aa21.29■■□□□ 1
VARS-220ENST00000461874 WDR81Q562E7 1941 aa21.28■■□□□ 1
VARS-220ENST00000461874 DARSP14868 501 aaKnown RBP21.28■■□□□ 1
VARS-220ENST00000461874 NR5A1Q13285 461 aa21.28■■□□□ 1
VARS-220ENST00000461874 DRP2Q13474 957 aa21.28■■□□□ 1
VARS-220ENST00000461874 FAM102BQ5T8I3 360 aa21.28■■□□□ 1
VARS-220ENST00000461874 ANO5Q75V66 913 aa21.28■■□□□ 1
VARS-220ENST00000461874 SH2D3AQ9BRG2 576 aa21.28■■□□□ 1
VARS-220ENST00000461874 ELAC1Q9H777 363 aaKnown RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms