RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 RNF135Q8IUD6 432 aa17.49■□□□□ 0.39
SF3A3-203ENST00000461869 BLIDQ8IZY5 108 aa17.49■□□□□ 0.39
SF3A3-203ENST00000461869 MFSD14AQ96MC6 490 aa17.49■□□□□ 0.39
SF3A3-203ENST00000461869 PSTPIP2Q9H939 334 aa17.49■□□□□ 0.39
SF3A3-203ENST00000461869 AGO3Q9H9G7 860 aaKnown RBP17.49■□□□□ 0.39
SF3A3-203ENST00000461869 PKD2L1Q9P0L9 805 aa17.49■□□□□ 0.39
SF3A3-203ENST00000461869 NOL7Q9UMY1 257 aaKnown RBP17.49■□□□□ 0.39
SF3A3-203ENST00000461869 MRPL42Q9Y6G3 142 aaKnown RBP17.49■□□□□ 0.39
SF3A3-203ENST00000461869 RRN3P2A6NIE6 340 aa17.48■□□□□ 0.39
SF3A3-203ENST00000461869 RPLP2P05387 115 aaKnown RBP17.48■□□□□ 0.39
SF3A3-203ENST00000461869 CD52P31358 61 aa17.48■□□□□ 0.39
SF3A3-203ENST00000461869 NDUFV1P49821 464 aa17.48■□□□□ 0.39
SF3A3-203ENST00000461869 MTMR1Q13613 665 aa17.48■□□□□ 0.39
SF3A3-203ENST00000461869 CAMK1Q14012 370 aa17.48■□□□□ 0.39
SF3A3-203ENST00000461869 HERC4Q5GLZ8 1057 aaPredicted RBP17.48■□□□□ 0.39
SF3A3-203ENST00000461869 IER5Q5VY09 327 aa17.48■□□□□ 0.39
SF3A3-203ENST00000461869 CMTR2Q8IYT2 770 aaKnown RBP17.48■□□□□ 0.39
SF3A3-203ENST00000461869 LINC01599Q8WXQ3 324 aa17.48■□□□□ 0.39
SF3A3-203ENST00000461869 P2RX5Q93086 422 aa17.48■□□□□ 0.39
SF3A3-203ENST00000461869 PPP2R3CQ969Q6 453 aa17.48■□□□□ 0.39
SF3A3-203ENST00000461869 ZBTB10Q96DT7 871 aa17.48■□□□□ 0.39
SF3A3-203ENST00000461869 SPATA32Q96LK8 384 aa17.48■□□□□ 0.39
SF3A3-203ENST00000461869 FAM49AQ9H0Q0 323 aaPredicted RBP17.48■□□□□ 0.39
SF3A3-203ENST00000461869 UBIAD1Q9Y5Z9 338 aa17.48■□□□□ 0.39
SF3A3-203ENST00000461869 TCHHQ07283 1943 aa17.48■□□□□ 0.39
SF3A3-203ENST00000461869 YEATS4O95619 227 aa17.47■□□□□ 0.39
SF3A3-203ENST00000461869 INSRRP14616 1297 aa17.47■□□□□ 0.39
SF3A3-203ENST00000461869 DNAJB1P25685 340 aa17.47■□□□□ 0.39
SF3A3-203ENST00000461869 TRAPPC10P48553 1259 aa17.47■□□□□ 0.39
SF3A3-203ENST00000461869 ADCY7P51828 1080 aa17.47■□□□□ 0.39
SF3A3-203ENST00000461869 NBR1Q14596 966 aa17.47■□□□□ 0.39
SF3A3-203ENST00000461869 NPY5RQ15761 445 aa17.47■□□□□ 0.39
SF3A3-203ENST00000461869 NAALADL2Q58DX5 795 aa17.47■□□□□ 0.39
SF3A3-203ENST00000461869 FAM173BQ6P4H8 233 aa17.47■□□□□ 0.39
SF3A3-203ENST00000461869 RTN4RL1Q86UN2 441 aaPredicted RBP17.47■□□□□ 0.39
SF3A3-203ENST00000461869 NPAS4Q8IUM7 802 aa17.47■□□□□ 0.39
SF3A3-203ENST00000461869 FTHL17Q9BXU8 183 aa17.47■□□□□ 0.39
SF3A3-203ENST00000461869 SQORQ9Y6N5 450 aa17.47■□□□□ 0.39
SF3A3-203ENST00000461869 ATG2AQ2TAZ0 1938 aa17.47■□□□□ 0.39
SF3A3-203ENST00000461869 SMCO2A6NFE2 343 aa17.46■□□□□ 0.39
SF3A3-203ENST00000461869 M0QZ92 97 aa17.46■□□□□ 0.39
SF3A3-203ENST00000461869 MAFGO15525 162 aa17.46■□□□□ 0.39
SF3A3-203ENST00000461869 PRPF40AO75400 957 aaKnown RBP17.46■□□□□ 0.39
SF3A3-203ENST00000461869 MBD3O95983 291 aa17.46■□□□□ 0.39
SF3A3-203ENST00000461869 ITGB1P05556 798 aa17.46■□□□□ 0.39
SF3A3-203ENST00000461869 STAG3L1P0CL83 205 aa17.46■□□□□ 0.39
SF3A3-203ENST00000461869 NR5A1Q13285 461 aa17.46■□□□□ 0.39
SF3A3-203ENST00000461869 UBE2SQ16763 222 aa17.46■□□□□ 0.39
SF3A3-203ENST00000461869 PAN2Q504Q3 1202 aaKnown RBP17.46■□□□□ 0.39
SF3A3-203ENST00000461869 MCTP2Q6DN12 878 aa17.46■□□□□ 0.39
SF3A3-203ENST00000461869 TYW1BQ6NUM6 668 aa17.46■□□□□ 0.39
SF3A3-203ENST00000461869 KRT25Q7Z3Z0 450 aa17.46■□□□□ 0.39
SF3A3-203ENST00000461869 CRIPAKQ8N1N5 446 aa17.46■□□□□ 0.39
SF3A3-203ENST00000461869 KLHL23Q8NBE8 558 aa17.46■□□□□ 0.39
SF3A3-203ENST00000461869 SPPL3Q8TCT6 385 aa17.46■□□□□ 0.39
SF3A3-203ENST00000461869 KCNG4Q8TDN1 519 aa17.46■□□□□ 0.39
SF3A3-203ENST00000461869 EDAQ92838 391 aa17.46■□□□□ 0.39
SF3A3-203ENST00000461869 MSLNLQ96KJ4 702 aa17.46■□□□□ 0.39
SF3A3-203ENST00000461869 USP28Q96RU2 1077 aa17.46■□□□□ 0.39
SF3A3-203ENST00000461869 JADE2Q9NQC1 790 aa17.46■□□□□ 0.39
SF3A3-203ENST00000461869 LMBRD1Q9NUN5 540 aa17.46■□□□□ 0.39
SF3A3-203ENST00000461869 CEP131Q9UPN4 1083 aa17.46■□□□□ 0.39
SF3A3-203ENST00000461869 TRPV2Q9Y5S1 764 aa17.46■□□□□ 0.39
SF3A3-203ENST00000461869 KAT6AQ92794 2004 aa17.46■□□□□ 0.39
SF3A3-203ENST00000461869 MUC6Q6W4X9 2439 aa17.46■□□□□ 0.38
SF3A3-203ENST00000461869 CCDC194A0A1B0GVG4 234 aa17.45■□□□□ 0.38
SF3A3-203ENST00000461869 SPDYE3A6NKU9 549 aa17.45■□□□□ 0.38
SF3A3-203ENST00000461869 EYA4O95677 639 aa17.45■□□□□ 0.38
SF3A3-203ENST00000461869 BMP15O95972 392 aa17.45■□□□□ 0.38
SF3A3-203ENST00000461869 NASPP49321 788 aaPredicted RBP17.45■□□□□ 0.38
SF3A3-203ENST00000461869 TMEM62Q0P6H9 643 aa17.45■□□□□ 0.38
SF3A3-203ENST00000461869 ADGRD2Q7Z7M1 963 aa17.45■□□□□ 0.38
SF3A3-203ENST00000461869 REXO1Q8N1G1 1221 aaKnown RBP17.45■□□□□ 0.38
SF3A3-203ENST00000461869 EFHBQ8N7U6 833 aa17.45■□□□□ 0.38
SF3A3-203ENST00000461869 OXER1Q8TDS5 423 aa17.45■□□□□ 0.38
SF3A3-203ENST00000461869 LEO1Q8WVC0 666 aaPredicted RBP17.45■□□□□ 0.38
SF3A3-203ENST00000461869 POF1BQ8WVV4 589 aa17.45■□□□□ 0.38
SF3A3-203ENST00000461869 TNFRSF25Q93038 417 aa17.45■□□□□ 0.38
SF3A3-203ENST00000461869 PCYT2Q99447 389 aa17.45■□□□□ 0.38
SF3A3-203ENST00000461869 AZI2Q9H6S1 392 aa17.45■□□□□ 0.38
SF3A3-203ENST00000461869 JPH1Q9HDC5 661 aaPredicted RBP17.45■□□□□ 0.38
SF3A3-203ENST00000461869 RIC8AQ9NPQ8 531 aa17.45■□□□□ 0.38
SF3A3-203ENST00000461869 PADI3Q9ULW8 664 aa17.45■□□□□ 0.38
SF3A3-203ENST00000461869 PCDHA6Q9UN73 950 aa17.45■□□□□ 0.38
SF3A3-203ENST00000461869 TRPC6Q9Y210 931 aa17.45■□□□□ 0.38
SF3A3-203ENST00000461869 PCDHA8Q9Y5H6 950 aa17.45■□□□□ 0.38
SF3A3-203ENST00000461869 TTC3P53804 2025 aa17.45■□□□□ 0.38
SF3A3-203ENST00000461869 UBE2HP62256 183 aa17.44■□□□□ 0.38
SF3A3-203ENST00000461869 PAK2Q13177 524 aa17.44■□□□□ 0.38
SF3A3-203ENST00000461869 STK38Q15208 465 aa17.44■□□□□ 0.38
SF3A3-203ENST00000461869 CHAMP1Q96JM3 812 aa17.44■□□□□ 0.38
SF3A3-203ENST00000461869 CELF4Q9BZC1 486 aaKnown RBP17.44■□□□□ 0.38
SF3A3-203ENST00000461869 GDPD2Q9HCC8 539 aa17.44■□□□□ 0.38
SF3A3-203ENST00000461869 CLEC1BQ9P126 229 aa17.44■□□□□ 0.38
SF3A3-203ENST00000461869 SLC9A2Q9UBY0 812 aa17.44■□□□□ 0.38
SF3A3-203ENST00000461869 RCOR1Q9UKL0 485 aa17.44■□□□□ 0.38
SF3A3-203ENST00000461869 LRFN2Q9ULH4 789 aa17.44■□□□□ 0.38
SF3A3-203ENST00000461869 PCDHA2Q9Y5H9 948 aa17.44■□□□□ 0.38
SF3A3-203ENST00000461869 MYO7AQ13402 2215 aa17.44■□□□□ 0.38
SF3A3-203ENST00000461869 IGSF9BQ9UPX0 1349 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms