RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 SLC23A3Q6PIS1 610 aa6.62□□□□□ -1.35
SPTA1-202ENST00000461624 LRRN4CLQ8ND94 238 aa6.62□□□□□ -1.35
SPTA1-202ENST00000461624 NPLOC4Q8TAT6 608 aa6.62□□□□□ -1.35
SPTA1-202ENST00000461624 TMEM40Q8WWA1 233 aa6.62□□□□□ -1.35
SPTA1-202ENST00000461624 FERMT2Q96AC1 680 aa6.62□□□□□ -1.35
SPTA1-202ENST00000461624 EDC3Q96F86 508 aaKnown RBP6.62□□□□□ -1.35
SPTA1-202ENST00000461624 RNF19AQ9NV58 838 aa6.62□□□□□ -1.35
SPTA1-202ENST00000461624 CACNA1FO60840 1977 aa6.62□□□□□ -1.35
SPTA1-202ENST00000461624 ROBO3Q96MS0 1386 aa6.61□□□□□ -1.35
SPTA1-202ENST00000461624 GAKO14976 1311 aa6.61□□□□□ -1.35
SPTA1-202ENST00000461624 ZNF521Q96K83 1311 aa6.61□□□□□ -1.35
SPTA1-202ENST00000461624 EPOPA6NHQ4 379 aa6.61□□□□□ -1.35
SPTA1-202ENST00000461624 SLC15A5A6NIM6 579 aa6.61□□□□□ -1.35
SPTA1-202ENST00000461624 ELL2O00472 640 aaPredicted RBP6.61□□□□□ -1.35
SPTA1-202ENST00000461624 SEPT4O43236 478 aa6.61□□□□□ -1.35
SPTA1-202ENST00000461624 CNGA1P29973 690 aa6.61□□□□□ -1.35
SPTA1-202ENST00000461624 PRDX5P30044 214 aa6.61□□□□□ -1.35
SPTA1-202ENST00000461624 CD96P40200 585 aa6.61□□□□□ -1.35
SPTA1-202ENST00000461624 IRX3P78415 501 aaPredicted RBP6.61□□□□□ -1.35
SPTA1-202ENST00000461624 FAM47AQ5JRC9 791 aa6.61□□□□□ -1.35
SPTA1-202ENST00000461624 ANO1Q5XXA6 986 aa6.61□□□□□ -1.35
SPTA1-202ENST00000461624 DIEXFQ68CQ4 756 aaKnown RBP6.61□□□□□ -1.35
SPTA1-202ENST00000461624 LMBR1LQ6UX01 489 aa6.61□□□□□ -1.35
SPTA1-202ENST00000461624 CCDC129Q6ZRS4 1044 aa6.61□□□□□ -1.35
SPTA1-202ENST00000461624 TSPYL6Q8N831 410 aa6.61□□□□□ -1.35
SPTA1-202ENST00000461624 SLC44A5Q8NCS7 719 aa6.61□□□□□ -1.35
SPTA1-202ENST00000461624 RGS22Q8NE09 1264 aa6.61□□□□□ -1.35
SPTA1-202ENST00000461624 LINS1Q8NG48 757 aa6.61□□□□□ -1.35
SPTA1-202ENST00000461624 ASB11Q8WXH4 323 aa6.61□□□□□ -1.35
SPTA1-202ENST00000461624 VWCEQ96DN2 955 aa6.61□□□□□ -1.35
SPTA1-202ENST00000461624 HEXIM2Q96MH2 286 aaKnown RBP6.61□□□□□ -1.35
SPTA1-202ENST00000461624 CBX8Q9HC52 389 aa6.61□□□□□ -1.35
SPTA1-202ENST00000461624 ALG13Q9NP73 1137 aaKnown RBP6.61□□□□□ -1.35
SPTA1-202ENST00000461624 CNNM1Q9NRU3 951 aa6.61□□□□□ -1.35
SPTA1-202ENST00000461624 USP40Q9NVE5 1235 aa6.61□□□□□ -1.35
SPTA1-202ENST00000461624 MSRAQ9UJ68 235 aa6.61□□□□□ -1.35
SPTA1-202ENST00000461624 PLXNA3P51805 1871 aa6.61□□□□□ -1.35
SPTA1-202ENST00000461624 GPR179Q6PRD1 2367 aa6.61□□□□□ -1.35
SPTA1-202ENST00000461624 KMT2EQ8IZD2 1858 aa6.6□□□□□ -1.35
SPTA1-202ENST00000461624 A0A1W2PQ45 241 aaPredicted RBP6.6□□□□□ -1.35
SPTA1-202ENST00000461624 A0A1W2PQY0 241 aa6.6□□□□□ -1.35
SPTA1-202ENST00000461624 ENC1O14682 589 aa6.6□□□□□ -1.35
SPTA1-202ENST00000461624 FANCGO15287 622 aa6.6□□□□□ -1.35
SPTA1-202ENST00000461624 PQBP1O60828 265 aaKnown RBP6.6□□□□□ -1.35
SPTA1-202ENST00000461624 FBXO24O75426 580 aa6.6□□□□□ -1.35
SPTA1-202ENST00000461624 ITIH2P19823 946 aa6.6□□□□□ -1.35
SPTA1-202ENST00000461624 FGFR2P21802 821 aa6.6□□□□□ -1.35
SPTA1-202ENST00000461624 NTF4P34130 210 aa6.6□□□□□ -1.35
SPTA1-202ENST00000461624 BACE1P56817 501 aa6.6□□□□□ -1.35
SPTA1-202ENST00000461624 RING1Q06587 406 aa6.6□□□□□ -1.35
SPTA1-202ENST00000461624 CCDC30Q5VVM6 783 aa6.6□□□□□ -1.35
SPTA1-202ENST00000461624 OLFML2BQ68BL8 750 aa6.6□□□□□ -1.35
SPTA1-202ENST00000461624 KRT40Q6A162 431 aa6.6□□□□□ -1.35
SPTA1-202ENST00000461624 ZNF365Q70YC5 407 aa6.6□□□□□ -1.35
SPTA1-202ENST00000461624 FAM214BQ7L5A3 538 aa6.6□□□□□ -1.35
SPTA1-202ENST00000461624 FAM178BQ8IXR5 827 aa6.6□□□□□ -1.35
SPTA1-202ENST00000461624 KCT2Q8NC54 265 aa6.6□□□□□ -1.35
SPTA1-202ENST00000461624 PRSS33Q8NF86 280 aa6.6□□□□□ -1.35
SPTA1-202ENST00000461624 OSBPL5Q9H0X9 879 aaPredicted RBP6.6□□□□□ -1.35
SPTA1-202ENST00000461624 MYH16Q9H6N6 1097 aa6.6□□□□□ -1.35
SPTA1-202ENST00000461624 SLC28A3Q9HAS3 691 aa6.6□□□□□ -1.35
SPTA1-202ENST00000461624 UNC79Q9P2D8 2635 aa6.6□□□□□ -1.35
SPTA1-202ENST00000461624 GCN1Q92616 2671 aaKnown RBP6.59□□□□□ -1.35
SPTA1-202ENST00000461624 MROH5Q6ZUA9 1318 aa6.59□□□□□ -1.35
SPTA1-202ENST00000461624 LPXNO60711 386 aa6.59□□□□□ -1.35
SPTA1-202ENST00000461624 ACRP10323 421 aa6.59□□□□□ -1.35
SPTA1-202ENST00000461624 SLC5A1P13866 664 aa6.59□□□□□ -1.35
SPTA1-202ENST00000461624 MYOGP15173 224 aa6.59□□□□□ -1.35
SPTA1-202ENST00000461624 CSF2RAP15509 400 aa6.59□□□□□ -1.35
SPTA1-202ENST00000461624 BMP6P22004 513 aa6.59□□□□□ -1.35
SPTA1-202ENST00000461624 CAP2P40123 477 aa6.59□□□□□ -1.35
SPTA1-202ENST00000461624 PPIGQ13427 754 aaKnown RBP eCLIP6.59□□□□□ -1.35
SPTA1-202ENST00000461624 CCDC57Q2TAC2 916 aa6.59□□□□□ -1.35
SPTA1-202ENST00000461624 PPM1JQ5JR12 505 aa6.59□□□□□ -1.35
SPTA1-202ENST00000461624 LLGL2Q6P1M3 1020 aa6.59□□□□□ -1.35
SPTA1-202ENST00000461624 PSRC1Q6PGN9 363 aaPredicted RBP6.59□□□□□ -1.35
SPTA1-202ENST00000461624 VPS37DQ86XT2 251 aa6.59□□□□□ -1.35
SPTA1-202ENST00000461624 CCDC146Q8IYE0 955 aa6.59□□□□□ -1.35
SPTA1-202ENST00000461624 WDR66Q8TBY9 1149 aa6.59□□□□□ -1.35
SPTA1-202ENST00000461624 KAZALD1Q96I82 304 aa6.59□□□□□ -1.35
SPTA1-202ENST00000461624 UIMC1Q96RL1 719 aa6.59□□□□□ -1.35
SPTA1-202ENST00000461624 NOC4LQ9BVI4 516 aaKnown RBP6.59□□□□□ -1.35
SPTA1-202ENST00000461624 IFT57Q9NWB7 429 aa6.59□□□□□ -1.35
SPTA1-202ENST00000461624 CYP8B1Q9UNU6 501 aa6.59□□□□□ -1.35
SPTA1-202ENST00000461624 RABGAP1Q9Y3P9 1069 aa6.59□□□□□ -1.35
SPTA1-202ENST00000461624 SALL1Q9NSC2 1324 aa6.58□□□□□ -1.36
SPTA1-202ENST00000461624 RFXAPO00287 272 aa6.58□□□□□ -1.36
SPTA1-202ENST00000461624 PDE8BO95263 885 aa6.58□□□□□ -1.36
SPTA1-202ENST00000461624 ALADP13716 330 aa6.58□□□□□ -1.36
SPTA1-202ENST00000461624 CLCN7P51798 805 aa6.58□□□□□ -1.36
SPTA1-202ENST00000461624 RABGGTBP53611 331 aa6.58□□□□□ -1.36
SPTA1-202ENST00000461624 MRPL58Q14197 206 aaKnown RBP6.58□□□□□ -1.36
SPTA1-202ENST00000461624 SHROOM1Q2M3G4 852 aaPredicted RBP6.58□□□□□ -1.36
SPTA1-202ENST00000461624 LRRC24Q50LG9 513 aa6.58□□□□□ -1.36
SPTA1-202ENST00000461624 CAVIN4Q5BKX8 364 aa6.58□□□□□ -1.36
SPTA1-202ENST00000461624 ZNF648Q5T619 568 aaPredicted RBP6.58□□□□□ -1.36
SPTA1-202ENST00000461624 ZBTB37Q5TC79 503 aa6.58□□□□□ -1.36
SPTA1-202ENST00000461624 MEI1Q5TIA1 1274 aa6.58□□□□□ -1.36
SPTA1-202ENST00000461624 LBX2Q6XYB7 198 aa6.58□□□□□ -1.36
SPTA1-202ENST00000461624 SPACA3Q8IXA5 215 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms