RNA–Protein interactions for RNA: ENST00000461477.5

NECTIN3-202, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-202ENST00000461477 PLPP4Q5VZY2 271 aa10.69□□□□□ -0.7
NECTIN3-202ENST00000461477 TMEM184AQ6ZMB5 413 aa10.69□□□□□ -0.7
NECTIN3-202ENST00000461477 LRRC55Q6ZSA7 311 aa10.69□□□□□ -0.7
NECTIN3-202ENST00000461477 TMEM40Q8WWA1 233 aa10.69□□□□□ -0.7
NECTIN3-202ENST00000461477 SENP7Q9BQF6 1050 aa10.69□□□□□ -0.7
NECTIN3-202ENST00000461477 POMKQ9H5K3 350 aa10.69□□□□□ -0.7
NECTIN3-202ENST00000461477 TYW1Q9NV66 732 aaKnown RBP10.69□□□□□ -0.7
NECTIN3-202ENST00000461477 PKD2L1Q9P0L9 805 aa10.69□□□□□ -0.7
NECTIN3-202ENST00000461477 CHD8Q9HCK8 2581 aa10.69□□□□□ -0.7
NECTIN3-202ENST00000461477 OTOGLQ3ZCN5 2332 aa10.68□□□□□ -0.7
NECTIN3-202ENST00000461477 MED19A0JLT2 244 aaPredicted RBP10.68□□□□□ -0.7
NECTIN3-202ENST00000461477 TBKBP1A7MCY6 615 aa10.68□□□□□ -0.7
NECTIN3-202ENST00000461477 PI15O43692 258 aa10.68□□□□□ -0.7
NECTIN3-202ENST00000461477 INSRRP14616 1297 aa10.68□□□□□ -0.7
NECTIN3-202ENST00000461477 CCDC178Q5BJE1 867 aa10.68□□□□□ -0.7
NECTIN3-202ENST00000461477 PCNX4Q63HM2 1172 aa10.68□□□□□ -0.7
NECTIN3-202ENST00000461477 CWF19L1Q69YN2 538 aaKnown RBP10.68□□□□□ -0.7
NECTIN3-202ENST00000461477 CWC27Q6UX04 472 aaKnown RBP10.68□□□□□ -0.7
NECTIN3-202ENST00000461477 SMC5Q8IY18 1101 aa10.68□□□□□ -0.7
NECTIN3-202ENST00000461477 ADSSL1Q8N142 457 aa10.68□□□□□ -0.7
NECTIN3-202ENST00000461477 SAMD3Q8N6K7 520 aa10.68□□□□□ -0.7
NECTIN3-202ENST00000461477 COLGALT1Q8NBJ5 622 aa10.68□□□□□ -0.7
NECTIN3-202ENST00000461477 MICAL1Q8TDZ2 1067 aa10.68□□□□□ -0.7
NECTIN3-202ENST00000461477 PPP2R3CQ969Q6 453 aa10.68□□□□□ -0.7
NECTIN3-202ENST00000461477 RILPL2Q969X0 211 aa10.68□□□□□ -0.7
NECTIN3-202ENST00000461477 NEK1Q96PY6 1258 aa10.68□□□□□ -0.7
NECTIN3-202ENST00000461477 ERVK-5Q9HDB9 667 aa10.68□□□□□ -0.7
NECTIN3-202ENST00000461477 RNF19AQ9NV58 838 aa10.68□□□□□ -0.7
NECTIN3-202ENST00000461477 NOC2LQ9Y3T9 749 aaKnown RBP10.68□□□□□ -0.7
NECTIN3-202ENST00000461477 TRPV2Q9Y5S1 764 aa10.68□□□□□ -0.7
NECTIN3-202ENST00000461477 SPTBN2O15020 2390 aa10.68□□□□□ -0.7
NECTIN3-202ENST00000461477 C2orf16Q68DN1 1984 aa10.67□□□□□ -0.7
NECTIN3-202ENST00000461477 PNMA6FA0A0J9YX94 578 aa10.67□□□□□ -0.7
NECTIN3-202ENST00000461477 STAM2O75886 525 aa10.67□□□□□ -0.7
NECTIN3-202ENST00000461477 FGFR1P11362 822 aa10.67□□□□□ -0.7
NECTIN3-202ENST00000461477 NPR3P17342 541 aa10.67□□□□□ -0.7
NECTIN3-202ENST00000461477 ID4P47928 161 aa10.67□□□□□ -0.7
NECTIN3-202ENST00000461477 SARSP49591 514 aaKnown RBP10.67□□□□□ -0.7
NECTIN3-202ENST00000461477 TROAPQ12815 778 aa10.67□□□□□ -0.7
NECTIN3-202ENST00000461477 PAK2Q13177 524 aa10.67□□□□□ -0.7
NECTIN3-202ENST00000461477 COL9A3Q14050 684 aaPredicted RBP10.67□□□□□ -0.7
NECTIN3-202ENST00000461477 PLCB4Q15147 1175 aa10.67□□□□□ -0.7
NECTIN3-202ENST00000461477 CELF4Q9BZC1 486 aaKnown RBP10.67□□□□□ -0.7
NECTIN3-202ENST00000461477 TMEM260Q9NX78 707 aa10.67□□□□□ -0.7
NECTIN3-202ENST00000461477 TPRP12270 2363 aaKnown RBP10.67□□□□□ -0.7
NECTIN3-202ENST00000461477 ASPMQ8IZT6 3477 aa10.67□□□□□ -0.7
NECTIN3-202ENST00000461477 ACACBO00763 2458 aa10.66□□□□□ -0.7
NECTIN3-202ENST00000461477 GPR179Q6PRD1 2367 aa10.66□□□□□ -0.7
NECTIN3-202ENST00000461477 C9IYK1 514 aa10.66□□□□□ -0.7
NECTIN3-202ENST00000461477 IRX6P78412 446 aaPredicted RBP10.66□□□□□ -0.7
NECTIN3-202ENST00000461477 ERMP1Q7Z2K6 904 aa10.66□□□□□ -0.7
NECTIN3-202ENST00000461477 RSPH3Q86UC2 560 aa10.66□□□□□ -0.7
NECTIN3-202ENST00000461477 C12orf76Q8N812 135 aaPredicted RBP10.66□□□□□ -0.7
NECTIN3-202ENST00000461477 RASGRP4Q8TDF6 673 aa10.66□□□□□ -0.7
NECTIN3-202ENST00000461477 SEPT1Q8WYJ6 367 aa10.66□□□□□ -0.7
NECTIN3-202ENST00000461477 UBAC1Q9BSL1 405 aa10.66□□□□□ -0.7
NECTIN3-202ENST00000461477 FTHL17Q9BXU8 183 aa10.66□□□□□ -0.7
NECTIN3-202ENST00000461477 LNPKQ9C0E8 428 aa10.66□□□□□ -0.7
NECTIN3-202ENST00000461477 AAASQ9NRG9 546 aa10.66□□□□□ -0.7
NECTIN3-202ENST00000461477 ERAP1Q9NZ08 941 aa10.66□□□□□ -0.7
NECTIN3-202ENST00000461477 PCDHA2Q9Y5H9 948 aa10.66□□□□□ -0.7
NECTIN3-202ENST00000461477 SQORQ9Y6N5 450 aa10.66□□□□□ -0.7
NECTIN3-202ENST00000461477 FRYQ5TBA9 3013 aa10.66□□□□□ -0.7
NECTIN3-202ENST00000461477 USP24Q9UPU5 2620 aa10.66□□□□□ -0.7
NECTIN3-202ENST00000461477 KDM3AQ9Y4C1 1321 aa10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 IGHDP01880 384 aa10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 NEFLP07196 543 aa10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 STAG3L1P0CL83 205 aa10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 UBE3AQ05086 875 aa10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 NFX1Q12986 1120 aaKnown RBP10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 MTMR3Q13615 1198 aa10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 UBE2SQ16763 222 aa10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 SPOUT1Q5T280 376 aaKnown RBP10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 SWT1Q5T5J6 900 aaKnown RBP10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 IER5Q5VY09 327 aa10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 ZBTB33Q86T24 672 aa10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 THNSL1Q8IYQ7 743 aa10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 CYP2W1Q8TAV3 490 aa10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 MRPS27Q92552 414 aaKnown RBP10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 GLG1Q92896 1179 aa10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 NKD2Q969F2 451 aaPredicted RBP10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 RMDN1Q96DB5 314 aa10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 CASD1Q96PB1 797 aa10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 PPP1R16BQ96T49 567 aa10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 CDCA3Q99618 268 aaPredicted RBP10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 ADAM2Q99965 735 aa10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 TCF25Q9BQ70 676 aa10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 DSCC1Q9BVC3 393 aa10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 KRT23Q9C075 422 aa10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 IRF2BPLQ9H1B7 796 aa10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 RGS18Q9NS28 235 aa10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 LRFN2Q9ULH4 789 aa10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 SORCS3Q9UPU3 1222 aa10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 PCDHB12Q9Y5F1 795 aa10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 HCFC2Q9Y5Z7 792 aa10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 UBIAD1Q9Y5Z9 338 aa10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 WDFY3Q8IZQ1 3526 aa10.65□□□□□ -0.7
NECTIN3-202ENST00000461477 WDR81Q562E7 1941 aa10.64□□□□□ -0.71
NECTIN3-202ENST00000461477 ZZEF1O43149 2961 aa10.64□□□□□ -0.71
NECTIN3-202ENST00000461477 ZBTB42B2RXF5 422 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms