RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 GTF3C6Q969F1 213 aa17.49■□□□□ 0.39
NUP50-213ENST00000461437 ZNF689Q96CS4 500 aaPredicted RBP17.49■□□□□ 0.39
NUP50-213ENST00000461437 MBOAT7Q96N66 472 aa17.49■□□□□ 0.39
NUP50-213ENST00000461437 UHRF1Q96T88 793 aaPredicted RBP17.49■□□□□ 0.39
NUP50-213ENST00000461437 C22orf23Q9BZE7 217 aa17.49■□□□□ 0.39
NUP50-213ENST00000461437 HCSTQ9UBK5 93 aa17.49■□□□□ 0.39
NUP50-213ENST00000461437 SEPT9Q9UHD8 586 aaPredicted RBP17.49■□□□□ 0.39
NUP50-213ENST00000461437 AKT3Q9Y243 479 aa17.49■□□□□ 0.39
NUP50-213ENST00000461437 MRPL42Q9Y6G3 142 aaKnown RBP17.49■□□□□ 0.39
NUP50-213ENST00000461437 GRM6O15303 877 aa17.48■□□□□ 0.39
NUP50-213ENST00000461437 STBD1O95210 358 aa17.48■□□□□ 0.39
NUP50-213ENST00000461437 RPLP2P05387 115 aaKnown RBP17.48■□□□□ 0.39
NUP50-213ENST00000461437 FGFR4P22455 802 aa17.48■□□□□ 0.39
NUP50-213ENST00000461437 JAK3P52333 1124 aa17.48■□□□□ 0.39
NUP50-213ENST00000461437 B3GNT9Q6UX72 402 aa17.48■□□□□ 0.39
NUP50-213ENST00000461437 CRIPAKQ8N1N5 446 aa17.48■□□□□ 0.39
NUP50-213ENST00000461437 IL27Q8NEV9 243 aa17.48■□□□□ 0.39
NUP50-213ENST00000461437 HLA-CQ95604 372 aa17.48■□□□□ 0.39
NUP50-213ENST00000461437 SAMD11Q96NU1 681 aa17.48■□□□□ 0.39
NUP50-213ENST00000461437 ADAM2Q99965 735 aa17.48■□□□□ 0.39
NUP50-213ENST00000461437 LMCD1Q9NZU5 365 aa17.48■□□□□ 0.39
NUP50-213ENST00000461437 SQORQ9Y6N5 450 aa17.48■□□□□ 0.39
NUP50-213ENST00000461437 CCNT1O60563 726 aaKnown RBP17.47■□□□□ 0.39
NUP50-213ENST00000461437 NLRP11P59045 1033 aaKnown RBP17.47■□□□□ 0.39
NUP50-213ENST00000461437 ANKRD1Q15327 319 aa17.47■□□□□ 0.39
NUP50-213ENST00000461437 PLA2G4FQ68DD2 849 aa17.47■□□□□ 0.39
NUP50-213ENST00000461437 GALNT17Q6IS24 598 aa17.47■□□□□ 0.39
NUP50-213ENST00000461437 NEK8Q86SG6 692 aa17.47■□□□□ 0.39
NUP50-213ENST00000461437 POTEDQ86YR6 584 aa17.47■□□□□ 0.39
NUP50-213ENST00000461437 NPAS4Q8IUM7 802 aa17.47■□□□□ 0.39
NUP50-213ENST00000461437 NSUN7Q8NE18 718 aaKnown RBP17.47■□□□□ 0.39
NUP50-213ENST00000461437 MRPL38Q96DV4 380 aaKnown RBP17.47■□□□□ 0.39
NUP50-213ENST00000461437 FAM167AQ96KS9 214 aa17.47■□□□□ 0.39
NUP50-213ENST00000461437 FTHL17Q9BXU8 183 aa17.47■□□□□ 0.39
NUP50-213ENST00000461437 ALG13Q9NP73 1137 aaKnown RBP17.47■□□□□ 0.39
NUP50-213ENST00000461437 CEP131Q9UPN4 1083 aa17.47■□□□□ 0.39
NUP50-213ENST00000461437 TNFRSF10AO00220 468 aa17.46■□□□□ 0.39
NUP50-213ENST00000461437 WNT7AO00755 349 aa17.46■□□□□ 0.39
NUP50-213ENST00000461437 CSDE1O75534 798 aaKnown RBP17.46■□□□□ 0.39
NUP50-213ENST00000461437 SFNP31947 248 aa17.46■□□□□ 0.39
NUP50-213ENST00000461437 BMPR1AP36894 532 aa17.46■□□□□ 0.39
NUP50-213ENST00000461437 CRYBB1P53674 252 aaPredicted RBP17.46■□□□□ 0.39
NUP50-213ENST00000461437 TCEAL5Q5H9L2 206 aa17.46■□□□□ 0.39
NUP50-213ENST00000461437 MOXD1Q6UVY6 613 aa17.46■□□□□ 0.39
NUP50-213ENST00000461437 ADAMTS10Q9H324 1103 aa17.46■□□□□ 0.39
NUP50-213ENST00000461437 UBE2ZQ9H832 354 aaPredicted RBP17.46■□□□□ 0.39
NUP50-213ENST00000461437 NRBP2Q9NSY0 501 aa17.46■□□□□ 0.39
NUP50-213ENST00000461437 VAV3Q9UKW4 847 aa17.46■□□□□ 0.39
NUP50-213ENST00000461437 LRFN2Q9ULH4 789 aa17.46■□□□□ 0.39
NUP50-213ENST00000461437 COG5Q9UP83 839 aa17.46■□□□□ 0.39
NUP50-213ENST00000461437 DENND3A2RUS2 1198 aa17.45■□□□□ 0.38
NUP50-213ENST00000461437 MAGEB2O15479 319 aa17.45■□□□□ 0.38
NUP50-213ENST00000461437 FGFR1P11362 822 aa17.45■□□□□ 0.38
NUP50-213ENST00000461437 XBP1P17861 261 aa17.45■□□□□ 0.38
NUP50-213ENST00000461437 SARSP49591 514 aaKnown RBP17.45■□□□□ 0.38
NUP50-213ENST00000461437 TBC1D8BQ0IIM8 1120 aa17.45■□□□□ 0.38
NUP50-213ENST00000461437 TARBP2Q15633 366 aaKnown RBP17.45■□□□□ 0.38
NUP50-213ENST00000461437 FAM102BQ5T8I3 360 aa17.45■□□□□ 0.38
NUP50-213ENST00000461437 EP400NLQ6ZTU2 488 aa17.45■□□□□ 0.38
NUP50-213ENST00000461437 HAS1Q92839 578 aa17.45■□□□□ 0.38
NUP50-213ENST00000461437 CEP89Q96ST8 783 aa17.45■□□□□ 0.38
NUP50-213ENST00000461437 MAP7D2Q96T17 732 aa17.45■□□□□ 0.38
NUP50-213ENST00000461437 KCNMB3Q9NPA1 279 aa17.45■□□□□ 0.38
NUP50-213ENST00000461437 BMP2KQ9NSY1 1161 aaPredicted RBP17.45■□□□□ 0.38
NUP50-213ENST00000461437 WRAP73Q9P2S5 460 aaPredicted RBP17.45■□□□□ 0.38
NUP50-213ENST00000461437 DDX11L8A8MPP1 907 aa17.44■□□□□ 0.38
NUP50-213ENST00000461437 STAG3L1P0CL83 205 aa17.44■□□□□ 0.38
NUP50-213ENST00000461437 KCNA5P22460 613 aa17.44■□□□□ 0.38
NUP50-213ENST00000461437 DNAJB1P25685 340 aa17.44■□□□□ 0.38
NUP50-213ENST00000461437 KRT2P35908 639 aa17.44■□□□□ 0.38
NUP50-213ENST00000461437 GPC3P51654 580 aa17.44■□□□□ 0.38
NUP50-213ENST00000461437 GUCY1B3Q02153 619 aa17.44■□□□□ 0.38
NUP50-213ENST00000461437 PTPROQ16827 1216 aa17.44■□□□□ 0.38
NUP50-213ENST00000461437 CMTR2Q8IYT2 770 aaKnown RBP17.44■□□□□ 0.38
NUP50-213ENST00000461437 ZNF579Q8NAF0 562 aaKnown RBP17.44■□□□□ 0.38
NUP50-213ENST00000461437 CLP1Q92989 425 aaKnown RBP17.44■□□□□ 0.38
NUP50-213ENST00000461437 TNFRSF25Q93038 417 aa17.44■□□□□ 0.38
NUP50-213ENST00000461437 SCLT1Q96NL6 688 aa17.44■□□□□ 0.38
NUP50-213ENST00000461437 RGS18Q9NS28 235 aa17.44■□□□□ 0.38
NUP50-213ENST00000461437 PCDHGC5Q9Y5F6 944 aa17.44■□□□□ 0.38
NUP50-213ENST00000461437 TBKBP1A7MCY6 615 aa17.43■□□□□ 0.38
NUP50-213ENST00000461437 BTBD18B2RXH4 712 aa17.43■□□□□ 0.38
NUP50-213ENST00000461437 C9IYK1 514 aa17.43■□□□□ 0.38
NUP50-213ENST00000461437 C5orf67F2Z3F1 127 aa17.43■□□□□ 0.38
NUP50-213ENST00000461437 H3BQ06 376 aaPredicted RBP17.43■□□□□ 0.38
NUP50-213ENST00000461437 GPR182O15218 404 aa17.43■□□□□ 0.38
NUP50-213ENST00000461437 GTF2F1P35269 517 aaKnown RBP eCLIP17.43■□□□□ 0.384e-6■■■■□ 25.2
NUP50-213ENST00000461437 NPEPPSP55786 919 aa17.43■□□□□ 0.38
NUP50-213ENST00000461437 DSC3Q14574 896 aa17.43■□□□□ 0.38
NUP50-213ENST00000461437 AAK1Q2M2I8 961 aa17.43■□□□□ 0.38
NUP50-213ENST00000461437 XKR3Q5GH77 459 aa17.43■□□□□ 0.38
NUP50-213ENST00000461437 NCAPH2Q6IBW4 605 aa17.43■□□□□ 0.38
NUP50-213ENST00000461437 ANO5Q75V66 913 aa17.43■□□□□ 0.38
NUP50-213ENST00000461437 KSR1Q8IVT5 923 aa17.43■□□□□ 0.38
NUP50-213ENST00000461437 CCDC83Q8IWF9 413 aa17.43■□□□□ 0.38
NUP50-213ENST00000461437 RDM1Q8NG50 284 aa17.43■□□□□ 0.38
NUP50-213ENST00000461437 NLRP7Q8WX94 980 aa17.43■□□□□ 0.38
NUP50-213ENST00000461437 PCDHB7Q9Y5E2 793 aa17.43■□□□□ 0.38
NUP50-213ENST00000461437 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.42■□□□□ 0.38
NUP50-213ENST00000461437 ITGB1P05556 798 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms