RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 KCNG4Q8TDN1 519 aa19.65■□□□□ 0.74
TOP3A-202ENST00000461127 RTP3Q9BQQ7 232 aa19.65■□□□□ 0.74
TOP3A-202ENST00000461127 LZTS2Q9BRK4 669 aa19.65■□□□□ 0.74
TOP3A-202ENST00000461127 KCNH7Q9NS40 1196 aa19.65■□□□□ 0.74
TOP3A-202ENST00000461127 DZANK1Q9NVP4 752 aa19.65■□□□□ 0.74
TOP3A-202ENST00000461127 U3KPZ7 1027 aaPredicted RBP19.65■□□□□ 0.74
TOP3A-202ENST00000461127 ZNF292O60281 2723 aa19.64■□□□□ 0.73
TOP3A-202ENST00000461127 HBP1O60381 514 aa19.64■□□□□ 0.73
TOP3A-202ENST00000461127 AOC1P19801 751 aa19.64■□□□□ 0.73
TOP3A-202ENST00000461127 SMARCA1P28370 1054 aa19.64■□□□□ 0.73
TOP3A-202ENST00000461127 RARS2Q5T160 578 aaKnown RBP19.64■□□□□ 0.73
TOP3A-202ENST00000461127 KIAA1841Q6NSI8 718 aa19.64■□□□□ 0.73
TOP3A-202ENST00000461127 CCDC105Q8IYK2 499 aa19.64■□□□□ 0.73
TOP3A-202ENST00000461127 KIAA0319LQ8IZA0 1049 aa19.64■□□□□ 0.73
TOP3A-202ENST00000461127 TMEM40Q8WWA1 233 aa19.64■□□□□ 0.73
TOP3A-202ENST00000461127 MAP3K14Q99558 947 aa19.64■□□□□ 0.73
TOP3A-202ENST00000461127 SEMA4AQ9H3S1 761 aa19.64■□□□□ 0.73
TOP3A-202ENST00000461127 OSBPL3Q9H4L5 887 aa19.64■□□□□ 0.73
TOP3A-202ENST00000461127 CDHR5Q9HBB8 845 aa19.64■□□□□ 0.73
TOP3A-202ENST00000461127 NFASCO94856 1347 aa19.64■□□□□ 0.73
TOP3A-202ENST00000461127 C2orf71A6NGG8 1288 aa19.63■□□□□ 0.73
TOP3A-202ENST00000461127 GNAQP50148 359 aa19.63■□□□□ 0.73
TOP3A-202ENST00000461127 CRYBB1P53674 252 aaPredicted RBP19.63■□□□□ 0.73
TOP3A-202ENST00000461127 ANGPT1Q15389 498 aa19.63■□□□□ 0.73
TOP3A-202ENST00000461127 CWF19L1Q69YN2 538 aaKnown RBP19.63■□□□□ 0.73
TOP3A-202ENST00000461127 DGLUCYQ7Z3D6 616 aa19.63■□□□□ 0.73
TOP3A-202ENST00000461127 NCOA7Q8NI08 942 aa19.63■□□□□ 0.73
TOP3A-202ENST00000461127 ACSF2Q96CM8 615 aaPredicted RBP19.63■□□□□ 0.73
TOP3A-202ENST00000461127 CASD1Q96PB1 797 aa19.63■□□□□ 0.73
TOP3A-202ENST00000461127 CYP26B1Q9NR63 512 aa19.63■□□□□ 0.73
TOP3A-202ENST00000461127 PCDHA6Q9UN73 950 aa19.63■□□□□ 0.73
TOP3A-202ENST00000461127 PCDHA8Q9Y5H6 950 aa19.63■□□□□ 0.73
TOP3A-202ENST00000461127 CACNA1BQ00975 2339 aa19.62■□□□□ 0.73
TOP3A-202ENST00000461127 COL1A2P08123 1366 aa19.62■□□□□ 0.73
TOP3A-202ENST00000461127 BACH1O14867 736 aa19.62■□□□□ 0.73
TOP3A-202ENST00000461127 CLASP2O75122 1294 aaKnown RBP19.62■□□□□ 0.73
TOP3A-202ENST00000461127 EOMESO95936 686 aa19.62■□□□□ 0.73
TOP3A-202ENST00000461127 WEE2P0C1S8 567 aa19.62■□□□□ 0.73
TOP3A-202ENST00000461127 PBX3P40426 434 aa19.62■□□□□ 0.73
TOP3A-202ENST00000461127 UBE2SQ16763 222 aa19.62■□□□□ 0.73
TOP3A-202ENST00000461127 KIZQ2M2Z5 673 aa19.62■□□□□ 0.73
TOP3A-202ENST00000461127 FAM160B1Q5W0V3 765 aa19.62■□□□□ 0.73
TOP3A-202ENST00000461127 LRRC55Q6ZSA7 311 aa19.62■□□□□ 0.73
TOP3A-202ENST00000461127 FAM228AQ86W67 206 aa19.62■□□□□ 0.73
TOP3A-202ENST00000461127 PLEKHM2Q8IWE5 1019 aa19.62■□□□□ 0.73
TOP3A-202ENST00000461127 OSMRQ99650 979 aa19.62■□□□□ 0.73
TOP3A-202ENST00000461127 MXRA8Q9BRK3 442 aa19.62■□□□□ 0.73
TOP3A-202ENST00000461127 FBXL21Q9UKT6 434 aa19.62■□□□□ 0.73
TOP3A-202ENST00000461127 EVPLQ92817 2033 aa19.62■□□□□ 0.73
TOP3A-202ENST00000461127 DDAH1O94760 285 aa19.61■□□□□ 0.73
TOP3A-202ENST00000461127 LMNAP02545 664 aaKnown RBP19.61■□□□□ 0.73
TOP3A-202ENST00000461127 ZSCAN20P17040 1043 aaPredicted RBP19.61■□□□□ 0.73
TOP3A-202ENST00000461127 ZNF484Q5JVG2 852 aa19.61■□□□□ 0.73
TOP3A-202ENST00000461127 DTWD2Q8NBA8 298 aa19.61■□□□□ 0.73
TOP3A-202ENST00000461127 CXCL14O95715 111 aa19.6■□□□□ 0.73
TOP3A-202ENST00000461127 ALDH7A1P49419 539 aaKnown RBP19.6■□□□□ 0.73
TOP3A-202ENST00000461127 TDGQ13569 410 aa19.6■□□□□ 0.73
TOP3A-202ENST00000461127 DSC3Q14574 896 aa19.6■□□□□ 0.73
TOP3A-202ENST00000461127 OTOP3Q7RTS5 596 aa19.6■□□□□ 0.73
TOP3A-202ENST00000461127 SMC5Q8IY18 1101 aa19.6■□□□□ 0.73
TOP3A-202ENST00000461127 ZNF654Q8IZM8 581 aa19.6■□□□□ 0.73
TOP3A-202ENST00000461127 SLC39A11Q8N1S5 342 aa19.6■□□□□ 0.73
TOP3A-202ENST00000461127 C12orf76Q8N812 135 aaPredicted RBP19.6■□□□□ 0.73
TOP3A-202ENST00000461127 RMDN1Q96DB5 314 aa19.6■□□□□ 0.73
TOP3A-202ENST00000461127 TMEM169Q96HH4 297 aa19.6■□□□□ 0.73
TOP3A-202ENST00000461127 PPP1R16BQ96T49 567 aa19.6■□□□□ 0.73
TOP3A-202ENST00000461127 PI15O43692 258 aa19.59■□□□□ 0.73
TOP3A-202ENST00000461127 ATG7O95352 703 aa19.59■□□□□ 0.73
TOP3A-202ENST00000461127 CYP21A2P08686 494 aa19.59■□□□□ 0.73
TOP3A-202ENST00000461127 GIT2Q14161 759 aa19.59■□□□□ 0.73
TOP3A-202ENST00000461127 CHD1LQ86WJ1 897 aa19.59■□□□□ 0.73
TOP3A-202ENST00000461127 MRPL9Q9BYD2 267 aaKnown RBP19.59■□□□□ 0.73
TOP3A-202ENST00000461127 DMXL1Q9Y485 3027 aa19.59■□□□□ 0.73
TOP3A-202ENST00000461127 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.58■□□□□ 0.72
TOP3A-202ENST00000461127 MED19A0JLT2 244 aaPredicted RBP19.58■□□□□ 0.72
TOP3A-202ENST00000461127 SPDYE4A6NLX3 237 aa19.58■□□□□ 0.72
TOP3A-202ENST00000461127 E7EWF7 191 aa19.58■□□□□ 0.72
TOP3A-202ENST00000461127 PDXDC2PQ6P474 469 aa19.58■□□□□ 0.72
TOP3A-202ENST00000461127 CCDC149Q6ZUS6 474 aa19.58■□□□□ 0.72
TOP3A-202ENST00000461127 CABP7Q86V35 215 aa19.58■□□□□ 0.72
TOP3A-202ENST00000461127 SIX5Q8N196 739 aa19.58■□□□□ 0.72
TOP3A-202ENST00000461127 METTL13Q8N6R0 699 aa19.58■□□□□ 0.72
TOP3A-202ENST00000461127 RNF169Q8NCN4 708 aa19.58■□□□□ 0.72
TOP3A-202ENST00000461127 IGDCC4Q8TDY8 1250 aa19.58■□□□□ 0.72
TOP3A-202ENST00000461127 MYL10Q9BUA6 226 aa19.58■□□□□ 0.72
TOP3A-202ENST00000461127 RNF19AQ9NV58 838 aa19.58■□□□□ 0.72
TOP3A-202ENST00000461127 DUSP12Q9UNI6 340 aa19.58■□□□□ 0.72
TOP3A-202ENST00000461127 IGKV6D-21A0A0A0MT36 114 aa19.57■□□□□ 0.72
TOP3A-202ENST00000461127 CARNS1A5YM72 827 aa19.57■□□□□ 0.72
TOP3A-202ENST00000461127 STK25O00506 426 aa19.57■□□□□ 0.72
TOP3A-202ENST00000461127 VTNP04004 478 aa19.57■□□□□ 0.72
TOP3A-202ENST00000461127 ARP10275 920 aa19.57■□□□□ 0.72
TOP3A-202ENST00000461127 NPR3P17342 541 aa19.57■□□□□ 0.72
TOP3A-202ENST00000461127 RFX1P22670 979 aa19.57■□□□□ 0.72
TOP3A-202ENST00000461127 METAP2P50579 478 aaKnown RBP eCLIP19.57■□□□□ 0.72
TOP3A-202ENST00000461127 PUM1Q14671 1186 aaKnown RBP eCLIP19.57■□□□□ 0.72
TOP3A-202ENST00000461127 CEP55Q53EZ4 464 aa19.57■□□□□ 0.72
TOP3A-202ENST00000461127 ECHDC2Q86YB7 292 aa19.57■□□□□ 0.72
TOP3A-202ENST00000461127 CKAP2LQ8IYA6 745 aa19.57■□□□□ 0.72
TOP3A-202ENST00000461127 KIAA2013Q8IYS2 634 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms