RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 DHX33Q9H6R0 707 aaKnown RBP23.04■■□□□ 1.28
RPUSD3-210ENST00000460909 SUGCTQ9HAC7 445 aa23.04■■□□□ 1.28
RPUSD3-210ENST00000460909 CDHR5Q9HBB8 845 aa23.04■■□□□ 1.28
RPUSD3-210ENST00000460909 SQORQ9Y6N5 450 aa23.04■■□□□ 1.28
RPUSD3-210ENST00000460909 GHRP10912 638 aa23.03■■□□□ 1.28
RPUSD3-210ENST00000460909 ACTN1P12814 892 aa23.03■■□□□ 1.28
RPUSD3-210ENST00000460909 MUTP22033 750 aa23.03■■□□□ 1.28
RPUSD3-210ENST00000460909 TMOD1P28289 359 aa23.03■■□□□ 1.28
RPUSD3-210ENST00000460909 RARRES1P49788 294 aa23.03■■□□□ 1.28
RPUSD3-210ENST00000460909 FXR1P51114 621 aaKnown RBP eCLIP23.03■■□□□ 1.28
RPUSD3-210ENST00000460909 XKR9Q5GH70 373 aa23.03■■□□□ 1.28
RPUSD3-210ENST00000460909 POTEGQ6S5H5 508 aa23.03■■□□□ 1.28
RPUSD3-210ENST00000460909 VWA3AA6NCI4 1184 aa23.02■■□□□ 1.28
RPUSD3-210ENST00000460909 BAIAP3O94812 1187 aa23.02■■□□□ 1.28
RPUSD3-210ENST00000460909 CDC25AP30304 524 aa23.02■■□□□ 1.28
RPUSD3-210ENST00000460909 RFC5P40937 340 aa23.02■■□□□ 1.28
RPUSD3-210ENST00000460909 BECN1Q14457 450 aa23.02■■□□□ 1.28
RPUSD3-210ENST00000460909 HAUS3Q68CZ6 603 aa23.02■■□□□ 1.28
RPUSD3-210ENST00000460909 FAM109BQ6ICB4 259 aaPredicted RBP23.02■■□□□ 1.28
RPUSD3-210ENST00000460909 USP28Q96RU2 1077 aa23.02■■□□□ 1.28
RPUSD3-210ENST00000460909 AGO3Q9H9G7 860 aaKnown RBP23.02■■□□□ 1.28
RPUSD3-210ENST00000460909 PTPRSQ13332 1948 aa23.02■■□□□ 1.28
RPUSD3-210ENST00000460909 MICAL3Q7RTP6 2002 aa23.01■■□□□ 1.27
RPUSD3-210ENST00000460909 M0QZ92 97 aa23.01■■□□□ 1.27
RPUSD3-210ENST00000460909 CCT6AP40227 531 aaKnown RBP23.01■■□□□ 1.27
RPUSD3-210ENST00000460909 KIZQ2M2Z5 673 aa23.01■■□□□ 1.27
RPUSD3-210ENST00000460909 USP38Q8NB14 1042 aa23.01■■□□□ 1.27
RPUSD3-210ENST00000460909 SNX29Q8TEQ0 813 aa23.01■■□□□ 1.27
RPUSD3-210ENST00000460909 TMEM40Q8WWA1 233 aa23.01■■□□□ 1.27
RPUSD3-210ENST00000460909 NACC1Q96RE7 527 aa23.01■■□□□ 1.27
RPUSD3-210ENST00000460909 MAP7D2Q96T17 732 aa23.01■■□□□ 1.27
RPUSD3-210ENST00000460909 IFIH1Q9BYX4 1025 aaKnown RBP23.01■■□□□ 1.27
RPUSD3-210ENST00000460909 MTIF3Q9H2K0 278 aaKnown RBP23.01■■□□□ 1.27
RPUSD3-210ENST00000460909 ADAMTS10Q9H324 1103 aa23.01■■□□□ 1.27
RPUSD3-210ENST00000460909 DBR1Q9UK59 544 aaKnown RBP23.01■■□□□ 1.27
RPUSD3-210ENST00000460909 AKT3Q9Y243 479 aa23.01■■□□□ 1.27
RPUSD3-210ENST00000460909 STK24Q9Y6E0 443 aa23.01■■□□□ 1.27
RPUSD3-210ENST00000460909 ABHD14A-ACY1A0A1B0GW23 586 aa23■■□□□ 1.27
RPUSD3-210ENST00000460909 F13A1P00488 732 aa23■■□□□ 1.27
RPUSD3-210ENST00000460909 GPC3P51654 580 aa23■■□□□ 1.27
RPUSD3-210ENST00000460909 CRYBB1P53674 252 aaPredicted RBP23■■□□□ 1.27
RPUSD3-210ENST00000460909 POLGP54098 1239 aaPredicted RBP23■■□□□ 1.27
RPUSD3-210ENST00000460909 NLRP11P59045 1033 aaKnown RBP23■■□□□ 1.27
RPUSD3-210ENST00000460909 GRIN1Q05586 938 aa23■■□□□ 1.27
RPUSD3-210ENST00000460909 IKBKEQ14164 716 aa23■■□□□ 1.27
RPUSD3-210ENST00000460909 FOXD4L5Q5VV16 416 aaPredicted RBP23■■□□□ 1.27
RPUSD3-210ENST00000460909 TSHZ1Q6ZSZ6 1077 aa23■■□□□ 1.27
RPUSD3-210ENST00000460909 EXOC8Q8IYI6 725 aa23■■□□□ 1.27
RPUSD3-210ENST00000460909 ZNF710Q8N1W2 664 aa23■■□□□ 1.27
RPUSD3-210ENST00000460909 FOXD4L4Q8WXT5 416 aaPredicted RBP23■■□□□ 1.27
RPUSD3-210ENST00000460909 SLC7A3Q8WY07 619 aa23■■□□□ 1.27
RPUSD3-210ENST00000460909 SEPT8Q92599 483 aa23■■□□□ 1.27
RPUSD3-210ENST00000460909 PPP1R16BQ96T49 567 aa23■■□□□ 1.27
RPUSD3-210ENST00000460909 JPH2Q9BR39 696 aaPredicted RBP23■■□□□ 1.27
RPUSD3-210ENST00000460909 XPNPEP1Q9NQW7 623 aa23■■□□□ 1.27
RPUSD3-210ENST00000460909 SLC4A7Q9Y6M7 1214 aa23■■□□□ 1.27
RPUSD3-210ENST00000460909 MORC2Q9Y6X9 1032 aaPredicted RBP23■■□□□ 1.27
RPUSD3-210ENST00000460909 ZBBXA8MT70 800 aa22.99■■□□□ 1.27
RPUSD3-210ENST00000460909 CD52P31358 61 aa22.99■■□□□ 1.27
RPUSD3-210ENST00000460909 DNM2P50570 870 aa22.99■■□□□ 1.27
RPUSD3-210ENST00000460909 WDR5P61964 334 aaKnown RBP22.99■■□□□ 1.27
RPUSD3-210ENST00000460909 SMAD3P84022 425 aaKnown RBP22.99■■□□□ 1.27
RPUSD3-210ENST00000460909 EMC2Q15006 297 aa22.99■■□□□ 1.27
RPUSD3-210ENST00000460909 KRT79Q5XKE5 535 aa22.99■■□□□ 1.27
RPUSD3-210ENST00000460909 APBB2Q92870 758 aa22.99■■□□□ 1.27
RPUSD3-210ENST00000460909 LRCH3Q96II8 777 aa22.99■■□□□ 1.27
RPUSD3-210ENST00000460909 AK8Q96MA6 479 aa22.99■■□□□ 1.27
RPUSD3-210ENST00000460909 SUCLA2Q9P2R7 463 aaPredicted RBP22.99■■□□□ 1.27
RPUSD3-210ENST00000460909 KIAA1024Q9UPX6 916 aa22.99■■□□□ 1.27
RPUSD3-210ENST00000460909 GINS2Q9Y248 185 aa22.99■■□□□ 1.27
RPUSD3-210ENST00000460909 ZDHHC9Q9Y397 364 aa22.99■■□□□ 1.27
RPUSD3-210ENST00000460909 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.98■■□□□ 1.27
RPUSD3-210ENST00000460909 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.98■■□□□ 1.27
RPUSD3-210ENST00000460909 GRXCR1A8MXD5 290 aa22.98■■□□□ 1.27
RPUSD3-210ENST00000460909 NASPP49321 788 aaPredicted RBP22.98■■□□□ 1.27
RPUSD3-210ENST00000460909 CEBPZQ03701 1054 aaKnown RBP22.98■■□□□ 1.27
RPUSD3-210ENST00000460909 SLC39A14Q15043 492 aa22.98■■□□□ 1.27
RPUSD3-210ENST00000460909 HYIQ5T013 277 aa22.98■■□□□ 1.27
RPUSD3-210ENST00000460909 OSMRQ99650 979 aa22.98■■□□□ 1.27
RPUSD3-210ENST00000460909 BMP2KQ9NSY1 1161 aaPredicted RBP22.98■■□□□ 1.27
RPUSD3-210ENST00000460909 FBXO2Q9UK22 296 aaPredicted RBP22.98■■□□□ 1.27
RPUSD3-210ENST00000460909 PADI3Q9ULW8 664 aa22.98■■□□□ 1.27
RPUSD3-210ENST00000460909 NOC2LQ9Y3T9 749 aaKnown RBP22.98■■□□□ 1.27
RPUSD3-210ENST00000460909 GBF1Q92538 1859 aa22.97■■□□□ 1.27
RPUSD3-210ENST00000460909 GAS2O43903 313 aaKnown RBP22.97■■□□□ 1.27
RPUSD3-210ENST00000460909 EFCAB14O75071 495 aa22.97■■□□□ 1.27
RPUSD3-210ENST00000460909 DGAT1O75907 488 aa22.97■■□□□ 1.27
RPUSD3-210ENST00000460909 BRD1O95696 1058 aa22.97■■□□□ 1.27
RPUSD3-210ENST00000460909 MARCKSP29966 332 aaPredicted RBP22.97■■□□□ 1.27
RPUSD3-210ENST00000460909 LONP1P36776 959 aaKnown RBP22.97■■□□□ 1.27
RPUSD3-210ENST00000460909 CDC42EP1Q00587 391 aa22.97■■□□□ 1.27
RPUSD3-210ENST00000460909 PRPF31Q8WWY3 499 aaKnown RBP22.97■■□□□ 1.27
RPUSD3-210ENST00000460909 TMEM143Q96AN5 459 aa22.97■■□□□ 1.27
RPUSD3-210ENST00000460909 ZNF668Q96K58 619 aaPredicted RBP22.97■■□□□ 1.27
RPUSD3-210ENST00000460909 PNMA5Q96PV4 448 aa22.97■■□□□ 1.27
RPUSD3-210ENST00000460909 DDX19AQ9NUU7 478 aaKnown RBP22.97■■□□□ 1.27
RPUSD3-210ENST00000460909 SRPRBQ9Y5M8 271 aaKnown RBP22.97■■□□□ 1.27
RPUSD3-210ENST00000460909 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.96■■□□□ 1.27
RPUSD3-210ENST00000460909 DEFB103AP81534 67 aa22.96■■□□□ 1.27
RPUSD3-210ENST00000460909 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms