RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 ST3GAL5Q9UNP4 418 aa13.32□□□□□ -0.28
SOX2-OT-201ENST00000460739 PLXNA4Q9HCM2 1894 aa13.31□□□□□ -0.28
SOX2-OT-201ENST00000460739 MGEA5O60502 916 aa13.31□□□□□ -0.28
SOX2-OT-201ENST00000460739 CTDNEP1O95476 244 aa13.31□□□□□ -0.28
SOX2-OT-201ENST00000460739 VTNP04004 478 aa13.31□□□□□ -0.28
SOX2-OT-201ENST00000460739 XBP1P17861 261 aa13.31□□□□□ -0.28
SOX2-OT-201ENST00000460739 TMOD1P28289 359 aa13.31□□□□□ -0.28
SOX2-OT-201ENST00000460739 SARSP49591 514 aaKnown RBP13.31□□□□□ -0.28
SOX2-OT-201ENST00000460739 CLCN3P51790 818 aa13.31□□□□□ -0.28
SOX2-OT-201ENST00000460739 INF2Q27J81 1249 aa13.31□□□□□ -0.28
SOX2-OT-201ENST00000460739 EFCAB12Q6NXP0 572 aa13.31□□□□□ -0.28
SOX2-OT-201ENST00000460739 MIER3Q7Z3K6 550 aa13.31□□□□□ -0.28
SOX2-OT-201ENST00000460739 FAM228AQ86W67 206 aa13.31□□□□□ -0.28
SOX2-OT-201ENST00000460739 P2RX5Q93086 422 aa13.31□□□□□ -0.28
SOX2-OT-201ENST00000460739 NECAB3Q96P71 396 aaPredicted RBP13.31□□□□□ -0.28
SOX2-OT-201ENST00000460739 OSMRQ99650 979 aa13.31□□□□□ -0.28
SOX2-OT-201ENST00000460739 PLVAPQ9BX97 442 aa13.31□□□□□ -0.28
SOX2-OT-201ENST00000460739 LMAN2LQ9H0V9 348 aa13.31□□□□□ -0.28
SOX2-OT-201ENST00000460739 C1orf112Q9NSG2 853 aa13.31□□□□□ -0.28
SOX2-OT-201ENST00000460739 RNF216Q9NWF9 866 aaPredicted RBP13.31□□□□□ -0.28
SOX2-OT-201ENST00000460739 DDX25Q9UHL0 483 aaKnown RBP13.31□□□□□ -0.28
SOX2-OT-201ENST00000460739 MRPL42Q9Y6G3 142 aaKnown RBP13.31□□□□□ -0.28
SOX2-OT-201ENST00000460739 CCDC194A0A1B0GVG4 234 aa13.3□□□□□ -0.28
SOX2-OT-201ENST00000460739 DENND3A2RUS2 1198 aa13.3□□□□□ -0.28
SOX2-OT-201ENST00000460739 GRM6O15303 877 aa13.3□□□□□ -0.28
SOX2-OT-201ENST00000460739 EIF5BO60841 1220 aaKnown RBP13.3□□□□□ -0.28
SOX2-OT-201ENST00000460739 NLRP11P59045 1033 aaKnown RBP13.3□□□□□ -0.28
SOX2-OT-201ENST00000460739 COL19A1Q14993 1142 aa13.3□□□□□ -0.28
SOX2-OT-201ENST00000460739 TARBP2Q15633 366 aaKnown RBP13.3□□□□□ -0.28
SOX2-OT-201ENST00000460739 LEXMQ3ZCV2 418 aa13.3□□□□□ -0.28
SOX2-OT-201ENST00000460739 PPP4R3AQ6IN85 833 aa13.3□□□□□ -0.28
SOX2-OT-201ENST00000460739 SLC24A5Q71RS6 500 aa13.3□□□□□ -0.28
SOX2-OT-201ENST00000460739 NEK8Q86SG6 692 aa13.3□□□□□ -0.28
SOX2-OT-201ENST00000460739 LRRC71Q8N4P6 559 aa13.3□□□□□ -0.28
SOX2-OT-201ENST00000460739 MAP7D2Q96T17 732 aa13.3□□□□□ -0.28
SOX2-OT-201ENST00000460739 PPP1R16BQ96T49 567 aa13.3□□□□□ -0.28
SOX2-OT-201ENST00000460739 ADAM2Q99965 735 aa13.3□□□□□ -0.28
SOX2-OT-201ENST00000460739 NIFKQ9BYG3 293 aaKnown RBP13.3□□□□□ -0.28
SOX2-OT-201ENST00000460739 ADAMTS10Q9H324 1103 aa13.3□□□□□ -0.28
SOX2-OT-201ENST00000460739 NSUN3Q9H649 340 aaKnown RBP13.3□□□□□ -0.28
SOX2-OT-201ENST00000460739 KCNMB3Q9NPA1 279 aa13.3□□□□□ -0.28
SOX2-OT-201ENST00000460739 GJB4Q9NTQ9 266 aa13.3□□□□□ -0.28
SOX2-OT-201ENST00000460739 LRFN2Q9ULH4 789 aa13.3□□□□□ -0.28
SOX2-OT-201ENST00000460739 AKT3Q9Y243 479 aa13.3□□□□□ -0.28
SOX2-OT-201ENST00000460739 C9IYK1 514 aa13.29□□□□□ -0.28
SOX2-OT-201ENST00000460739 SLC37A4O43826 429 aa13.29□□□□□ -0.28
SOX2-OT-201ENST00000460739 STBD1O95210 358 aa13.29□□□□□ -0.28
SOX2-OT-201ENST00000460739 MMP1P03956 469 aa13.29□□□□□ -0.28
SOX2-OT-201ENST00000460739 FDPSP14324 419 aaKnown RBP13.29□□□□□ -0.28
SOX2-OT-201ENST00000460739 GCFC2P16383 781 aaKnown RBP13.29□□□□□ -0.28
SOX2-OT-201ENST00000460739 FAM189BP81408 668 aa13.29□□□□□ -0.28
SOX2-OT-201ENST00000460739 TBC1D8BQ0IIM8 1120 aa13.29□□□□□ -0.28
SOX2-OT-201ENST00000460739 DSC3Q14574 896 aa13.29□□□□□ -0.28
SOX2-OT-201ENST00000460739 ME3Q16798 604 aa13.29□□□□□ -0.28
SOX2-OT-201ENST00000460739 LETM2Q2VYF4 491 aa13.29□□□□□ -0.28
SOX2-OT-201ENST00000460739 NAALADL2Q58DX5 795 aa13.29□□□□□ -0.28
SOX2-OT-201ENST00000460739 XKR3Q5GH77 459 aa13.29□□□□□ -0.28
SOX2-OT-201ENST00000460739 TCEAL5Q5H9L2 206 aa13.29□□□□□ -0.28
SOX2-OT-201ENST00000460739 NEK9Q8TD19 979 aa13.29□□□□□ -0.28
SOX2-OT-201ENST00000460739 OXER1Q8TDS5 423 aa13.29□□□□□ -0.28
SOX2-OT-201ENST00000460739 WASF1Q92558 559 aa13.29□□□□□ -0.28
SOX2-OT-201ENST00000460739 GTF3C6Q969F1 213 aa13.29□□□□□ -0.28
SOX2-OT-201ENST00000460739 FAM20AQ96MK3 541 aa13.29□□□□□ -0.28
SOX2-OT-201ENST00000460739 CEP89Q96ST8 783 aa13.29□□□□□ -0.28
SOX2-OT-201ENST00000460739 ORC3Q9UBD5 711 aaPredicted RBP13.29□□□□□ -0.28
SOX2-OT-201ENST00000460739 PCDHB7Q9Y5E2 793 aa13.29□□□□□ -0.28
SOX2-OT-201ENST00000460739 ARID2Q68CP9 1835 aa13.29□□□□□ -0.28
SOX2-OT-201ENST00000460739 IGKV6-21A0A0C4DH24 114 aa13.28□□□□□ -0.28
SOX2-OT-201ENST00000460739 DTNBO60941 627 aa13.28□□□□□ -0.28
SOX2-OT-201ENST00000460739 LARGE1O95461 756 aa13.28□□□□□ -0.28
SOX2-OT-201ENST00000460739 KCNA5P22460 613 aa13.28□□□□□ -0.28
SOX2-OT-201ENST00000460739 EIF4BP23588 611 aaKnown RBP13.28□□□□□ -0.28
SOX2-OT-201ENST00000460739 GATMP50440 423 aa13.28□□□□□ -0.28
SOX2-OT-201ENST00000460739 GPC3P51654 580 aa13.28□□□□□ -0.28
SOX2-OT-201ENST00000460739 PPP2R5CQ13362 524 aa13.28□□□□□ -0.28
SOX2-OT-201ENST00000460739 PAN2Q504Q3 1202 aaKnown RBP13.28□□□□□ -0.28
SOX2-OT-201ENST00000460739 NECAB1Q8N987 351 aa13.28□□□□□ -0.28
SOX2-OT-201ENST00000460739 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.28□□□□□ -0.28
SOX2-OT-201ENST00000460739 PABPC5Q96DU9 382 aaKnown RBP13.28□□□□□ -0.28
SOX2-OT-201ENST00000460739 NAP1L4Q99733 375 aaKnown RBP13.28□□□□□ -0.28
SOX2-OT-201ENST00000460739 ELAC1Q9H777 363 aaKnown RBP13.28□□□□□ -0.28
SOX2-OT-201ENST00000460739 ALG13Q9NP73 1137 aaKnown RBP13.28□□□□□ -0.28
SOX2-OT-201ENST00000460739 TMEM161AQ9NX61 479 aa13.28□□□□□ -0.28
SOX2-OT-201ENST00000460739 SEPT9Q9UHD8 586 aaPredicted RBP13.28□□□□□ -0.28
SOX2-OT-201ENST00000460739 VAV3Q9UKW4 847 aa13.28□□□□□ -0.28
SOX2-OT-201ENST00000460739 PLAGL2Q9UPG8 496 aa13.28□□□□□ -0.28
SOX2-OT-201ENST00000460739 TBX3O15119 743 aa13.27□□□□□ -0.29
SOX2-OT-201ENST00000460739 NCK2O43639 380 aa13.27□□□□□ -0.29
SOX2-OT-201ENST00000460739 CCNT1O60563 726 aaKnown RBP13.27□□□□□ -0.29
SOX2-OT-201ENST00000460739 ITGB1P05556 798 aa13.27□□□□□ -0.29
SOX2-OT-201ENST00000460739 DARSP14868 501 aaKnown RBP13.27□□□□□ -0.29
SOX2-OT-201ENST00000460739 NEK4P51957 841 aa13.27□□□□□ -0.29
SOX2-OT-201ENST00000460739 PSMC5P62195 406 aa13.27□□□□□ -0.29
SOX2-OT-201ENST00000460739 CDC42EP1Q00587 391 aa13.27□□□□□ -0.29
SOX2-OT-201ENST00000460739 CAMK1Q14012 370 aa13.27□□□□□ -0.29
SOX2-OT-201ENST00000460739 MTERF2Q49AM1 385 aa13.27□□□□□ -0.29
SOX2-OT-201ENST00000460739 PIK3AP1Q6ZUJ8 805 aa13.27□□□□□ -0.29
SOX2-OT-201ENST00000460739 ANO5Q75V66 913 aa13.27□□□□□ -0.29
SOX2-OT-201ENST00000460739 TMEM150BA6NC51 233 aa13.26□□□□□ -0.29
SOX2-OT-201ENST00000460739 EML1O00423 815 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms