RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 PNMA5Q96PV4 448 aa16.81■□□□□ 0.28
SSR4-206ENST00000460616 TRIM51Q9BSJ1 452 aa16.81■□□□□ 0.28
SSR4-206ENST00000460616 ZMYND12Q9H0C1 365 aa16.81■□□□□ 0.28
SSR4-206ENST00000460616 NSRP1Q9H0G5 558 aaKnown RBP16.81■□□□□ 0.28
SSR4-206ENST00000460616 RAB17Q9H0T7 212 aa16.81■□□□□ 0.28
SSR4-206ENST00000460616 PABPC3Q9H361 631 aaKnown RBP16.81■□□□□ 0.28
SSR4-206ENST00000460616 SLC5A4Q9NY91 659 aa16.81■□□□□ 0.28
SSR4-206ENST00000460616 NAGPAQ9UK23 515 aa16.81■□□□□ 0.28
SSR4-206ENST00000460616 CORO1CQ9ULV4 474 aaPredicted RBP16.81■□□□□ 0.28
SSR4-206ENST00000460616 RGS16O15492 202 aaPredicted RBP16.81■□□□□ 0.28
SSR4-206ENST00000460616 CYTH3O43739 400 aa16.81■□□□□ 0.28
SSR4-206ENST00000460616 RARAP10276 462 aa16.81■□□□□ 0.28
SSR4-206ENST00000460616 CYP2D6P10635 497 aa16.81■□□□□ 0.28
SSR4-206ENST00000460616 GYG1P46976 350 aa16.81■□□□□ 0.28
SSR4-206ENST00000460616 PMS2P54278 862 aa16.81■□□□□ 0.28
SSR4-206ENST00000460616 INHBEP58166 350 aa16.81■□□□□ 0.28
SSR4-206ENST00000460616 IFI35P80217 286 aaPredicted RBP16.81■□□□□ 0.28
SSR4-206ENST00000460616 GPSM2P81274 684 aa16.81■□□□□ 0.28
SSR4-206ENST00000460616 ZCWPW2Q504Y3 356 aa16.81■□□□□ 0.28
SSR4-206ENST00000460616 IRF2BP2Q7Z5L9 587 aa16.81■□□□□ 0.28
SSR4-206ENST00000460616 DAAM2Q86T65 1068 aa16.81■□□□□ 0.28
SSR4-206ENST00000460616 ECT2Q9H8V3 914 aa16.81■□□□□ 0.28
SSR4-206ENST00000460616 SUCLA2Q9P2R7 463 aaPredicted RBP16.81■□□□□ 0.28
SSR4-206ENST00000460616 MYH7BA7E2Y1 1941 aa16.8■□□□□ 0.28
SSR4-206ENST00000460616 SMIM23A6NLE4 172 aa16.8■□□□□ 0.28
SSR4-206ENST00000460616 HOXA7P31268 230 aaPredicted RBP16.8■□□□□ 0.28
SSR4-206ENST00000460616 EPS15P42566 896 aa16.8■□□□□ 0.28
SSR4-206ENST00000460616 NCALDP61601 193 aa16.8■□□□□ 0.28
SSR4-206ENST00000460616 TFAP4Q01664 338 aa16.8■□□□□ 0.28
SSR4-206ENST00000460616 POU5F1Q01860 360 aaKnown RBP16.8■□□□□ 0.28
SSR4-206ENST00000460616 GRM4Q14833 912 aa16.8■□□□□ 0.28
SSR4-206ENST00000460616 SLC35G1Q2M3R5 365 aa16.8■□□□□ 0.28
SSR4-206ENST00000460616 DENND2CQ68D51 928 aa16.8■□□□□ 0.28
SSR4-206ENST00000460616 ALKBH5Q6P6C2 394 aaKnown RBP16.8■□□□□ 0.28
SSR4-206ENST00000460616 DGKHQ86XP1 1220 aa16.8■□□□□ 0.28
SSR4-206ENST00000460616 NEK9Q8TD19 979 aa16.8■□□□□ 0.28
SSR4-206ENST00000460616 ATP8B4Q8TF62 1192 aa16.8■□□□□ 0.28
SSR4-206ENST00000460616 PRCCQ92733 491 aaPredicted RBP16.8■□□□□ 0.28
SSR4-206ENST00000460616 EPB41L4BQ9H329 900 aa16.8■□□□□ 0.28
SSR4-206ENST00000460616 CCDC134Q9H6E4 229 aa16.8■□□□□ 0.28
SSR4-206ENST00000460616 AZI2Q9H6S1 392 aa16.8■□□□□ 0.28
SSR4-206ENST00000460616 DCP1AQ9NPI6 582 aaPredicted RBP16.8■□□□□ 0.28
SSR4-206ENST00000460616 GGT7Q9UJ14 662 aa16.8■□□□□ 0.28
SSR4-206ENST00000460616 GOLGA6L10A0A0M3HER8 536 aa16.8■□□□□ 0.28
SSR4-206ENST00000460616 IGF2BP3O00425 579 aaKnown RBP eCLIP16.8■□□□□ 0.28
SSR4-206ENST00000460616 GNA14O95837 355 aa16.8■□□□□ 0.28
SSR4-206ENST00000460616 IFNAR2P48551 515 aa16.8■□□□□ 0.28
SSR4-206ENST00000460616 SLFN11Q7Z7L1 901 aa16.8■□□□□ 0.28
SSR4-206ENST00000460616 TRIM59Q8IWR1 403 aa16.8■□□□□ 0.28
SSR4-206ENST00000460616 CEP63Q96MT8 703 aa16.8■□□□□ 0.28
SSR4-206ENST00000460616 GANQ9H2C0 597 aa16.8■□□□□ 0.28
SSR4-206ENST00000460616 MTMR7Q9Y216 660 aa16.8■□□□□ 0.28
SSR4-206ENST00000460616 STXBP5LQ9Y2K9 1186 aa16.8■□□□□ 0.28
SSR4-206ENST00000460616 BZW2Q9Y6E2 419 aaKnown RBP16.8■□□□□ 0.28
SSR4-206ENST00000460616 ENO4A6NNW6 628 aa16.79■□□□□ 0.28
SSR4-206ENST00000460616 FGGP02679 453 aa16.79■□□□□ 0.28
SSR4-206ENST00000460616 C6orf118Q5T5N4 469 aa16.79■□□□□ 0.28
SSR4-206ENST00000460616 AP1ARQ63HQ0 302 aa16.79■□□□□ 0.28
SSR4-206ENST00000460616 STYK1Q6J9G0 422 aa16.79■□□□□ 0.28
SSR4-206ENST00000460616 ZNF384Q8TF68 577 aa16.79■□□□□ 0.28
SSR4-206ENST00000460616 RAD54LQ92698 747 aa16.79■□□□□ 0.28
SSR4-206ENST00000460616 LRRC27Q9C0I9 530 aa16.79■□□□□ 0.28
SSR4-206ENST00000460616 SPON1Q9HCB6 807 aa16.79■□□□□ 0.28
SSR4-206ENST00000460616 IL17RBQ9NRM6 502 aa16.79■□□□□ 0.28
SSR4-206ENST00000460616 ANKIB1Q9P2G1 1089 aa16.79■□□□□ 0.28
SSR4-206ENST00000460616 SPDYE3A6NKU9 549 aa16.79■□□□□ 0.28
SSR4-206ENST00000460616 SNX3O60493 162 aa16.79■□□□□ 0.28
SSR4-206ENST00000460616 BBOX1O75936 387 aa16.79■□□□□ 0.28
SSR4-206ENST00000460616 PDE6CP51160 858 aa16.79■□□□□ 0.28
SSR4-206ENST00000460616 ZNF131P52739 623 aa16.79■□□□□ 0.28
SSR4-206ENST00000460616 NAPAP54920 295 aa16.79■□□□□ 0.28
SSR4-206ENST00000460616 SYCE1Q8N0S2 351 aa16.79■□□□□ 0.28
SSR4-206ENST00000460616 SPICE1Q8N0Z3 855 aa16.79■□□□□ 0.28
SSR4-206ENST00000460616 NLGN2Q8NFZ4 835 aa16.79■□□□□ 0.28
SSR4-206ENST00000460616 CNKSR1Q969H4 720 aa16.79■□□□□ 0.28
SSR4-206ENST00000460616 RNF25Q96BH1 459 aaPredicted RBP16.79■□□□□ 0.28
SSR4-206ENST00000460616 KLHL29Q96CT2 875 aa16.79■□□□□ 0.28
SSR4-206ENST00000460616 ZDHHC18Q9NUE0 388 aa16.79■□□□□ 0.28
SSR4-206ENST00000460616 CD2APQ9Y5K6 639 aa16.79■□□□□ 0.28
SSR4-206ENST00000460616 SMCO2A6NFE2 343 aa16.78■□□□□ 0.28
SSR4-206ENST00000460616 LIN7AO14910 233 aaPredicted RBP16.78■□□□□ 0.28
SSR4-206ENST00000460616 AGTP01019 485 aa16.78■□□□□ 0.28
SSR4-206ENST00000460616 ALDH1B1P30837 517 aa16.78■□□□□ 0.28
SSR4-206ENST00000460616 DR1Q01658 176 aa16.78■□□□□ 0.28
SSR4-206ENST00000460616 ADCY2Q08462 1091 aa16.78■□□□□ 0.28
SSR4-206ENST00000460616 SLC29A2Q14542 456 aa16.78■□□□□ 0.28
SSR4-206ENST00000460616 NT5DC3Q86UY8 548 aa16.78■□□□□ 0.28
SSR4-206ENST00000460616 TXNRD3Q86VQ6 643 aa16.78■□□□□ 0.28
SSR4-206ENST00000460616 TBCKQ8TEA7 893 aa16.78■□□□□ 0.28
SSR4-206ENST00000460616 ERP44Q9BS26 406 aa16.78■□□□□ 0.28
SSR4-206ENST00000460616 CRNKL1Q9BZJ0 848 aaKnown RBP16.78■□□□□ 0.28
SSR4-206ENST00000460616 NR2E1Q9Y466 385 aa16.78■□□□□ 0.28
SSR4-206ENST00000460616 BAZ2AQ9UIF9 1905 aaKnown RBP16.78■□□□□ 0.28
SSR4-206ENST00000460616 KLHL33A6NCF5 533 aa16.78■□□□□ 0.28
SSR4-206ENST00000460616 FLOT1O75955 427 aa16.78■□□□□ 0.28
SSR4-206ENST00000460616 ACTN1P12814 892 aa16.78■□□□□ 0.28
SSR4-206ENST00000460616 PLTPP55058 493 aa16.78■□□□□ 0.28
SSR4-206ENST00000460616 COPS2P61201 443 aa16.78■□□□□ 0.28
SSR4-206ENST00000460616 MAP2K1Q02750 393 aaPredicted RBP16.78■□□□□ 0.28
SSR4-206ENST00000460616 BLMHQ13867 455 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 302.6 ms