RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 POTEGQ6S5H5 508 aa25.06■■□□□ 1.6
C9orf3-209ENST00000460573 ZNF579Q8NAF0 562 aaKnown RBP25.06■■□□□ 1.6
C9orf3-209ENST00000460573 CALML4Q96GE6 196 aa25.06■■□□□ 1.6
C9orf3-209ENST00000460573 CDK5RAP3Q96JB5 506 aa25.06■■□□□ 1.6
C9orf3-209ENST00000460573 CCDC43Q96MW1 224 aaKnown RBP25.06■■□□□ 1.6
C9orf3-209ENST00000460573 CCSER1Q9C0I3 900 aa25.06■■□□□ 1.6
C9orf3-209ENST00000460573 TMEM150BA6NC51 233 aa25.05■■□□□ 1.6
C9orf3-209ENST00000460573 MAFO75444 373 aaPredicted RBP25.05■■□□□ 1.6
C9orf3-209ENST00000460573 ACRP10323 421 aa25.05■■□□□ 1.6
C9orf3-209ENST00000460573 CKBP12277 381 aa25.05■■□□□ 1.6
C9orf3-209ENST00000460573 TXLNAP40222 546 aa25.05■■□□□ 1.6
C9orf3-209ENST00000460573 RARRES1P49788 294 aa25.05■■□□□ 1.6
C9orf3-209ENST00000460573 CCL23P55773 120 aa25.05■■□□□ 1.6
C9orf3-209ENST00000460573 NPEPPSP55786 919 aa25.05■■□□□ 1.6
C9orf3-209ENST00000460573 PLA2G4FQ68DD2 849 aa25.05■■□□□ 1.6
C9orf3-209ENST00000460573 RUFY4Q6ZNE9 571 aa25.05■■□□□ 1.6
C9orf3-209ENST00000460573 PIGOQ8TEQ8 1089 aa25.05■■□□□ 1.6
C9orf3-209ENST00000460573 SLC7A3Q8WY07 619 aa25.05■■□□□ 1.6
C9orf3-209ENST00000460573 SPATA32Q96LK8 384 aa25.05■■□□□ 1.6
C9orf3-209ENST00000460573 CLIC6Q96NY7 704 aa25.05■■□□□ 1.6
C9orf3-209ENST00000460573 DDX19AQ9NUU7 478 aaKnown RBP25.05■■□□□ 1.6
C9orf3-209ENST00000460573 DNM3Q9UQ16 869 aa25.05■■□□□ 1.6
C9orf3-209ENST00000460573 TRIP12Q14669 1992 aaPredicted RBP25.05■■□□□ 1.6
C9orf3-209ENST00000460573 IGKV6-21A0A0C4DH24 114 aa25.04■■□□□ 1.6
C9orf3-209ENST00000460573 ZBTB39O15060 712 aa25.04■■□□□ 1.6
C9orf3-209ENST00000460573 GAS2O43903 313 aaKnown RBP25.04■■□□□ 1.6
C9orf3-209ENST00000460573 SELPP16109 830 aa25.04■■□□□ 1.6
C9orf3-209ENST00000460573 THPOP40225 353 aa25.04■■□□□ 1.6
C9orf3-209ENST00000460573 ECM1Q16610 540 aa25.04■■□□□ 1.6
C9orf3-209ENST00000460573 EFCAB12Q6NXP0 572 aa25.04■■□□□ 1.6
C9orf3-209ENST00000460573 ZNF710Q8N1W2 664 aa25.04■■□□□ 1.6
C9orf3-209ENST00000460573 DHX33Q9H6R0 707 aaKnown RBP25.04■■□□□ 1.6
C9orf3-209ENST00000460573 IL23AQ9NPF7 189 aa25.04■■□□□ 1.6
C9orf3-209ENST00000460573 DGAT1O75907 488 aa25.03■■□□□ 1.6
C9orf3-209ENST00000460573 ME1P48163 572 aa25.03■■□□□ 1.6
C9orf3-209ENST00000460573 DNM2P50570 870 aa25.03■■□□□ 1.6
C9orf3-209ENST00000460573 POLGP54098 1239 aaPredicted RBP25.03■■□□□ 1.6
C9orf3-209ENST00000460573 ZNF365Q70YC5 407 aa25.03■■□□□ 1.6
C9orf3-209ENST00000460573 RPUSD2Q8IZ73 545 aaKnown RBP25.03■■□□□ 1.6
C9orf3-209ENST00000460573 METTL13Q8N6R0 699 aa25.03■■□□□ 1.6
C9orf3-209ENST00000460573 LEO1Q8WVC0 666 aaPredicted RBP25.03■■□□□ 1.6
C9orf3-209ENST00000460573 DNAJB3Q8WWF6 145 aa25.03■■□□□ 1.6
C9orf3-209ENST00000460573 WNT8BQ93098 351 aa25.03■■□□□ 1.6
C9orf3-209ENST00000460573 SH2D3AQ9BRG2 576 aa25.03■■□□□ 1.6
C9orf3-209ENST00000460573 CCDC39Q9UFE4 941 aa25.03■■□□□ 1.6
C9orf3-209ENST00000460573 EYA4O95677 639 aa25.02■■□□□ 1.6
C9orf3-209ENST00000460573 FGBP02675 491 aa25.02■■□□□ 1.6
C9orf3-209ENST00000460573 IQCF3P0C7M6 154 aa25.02■■□□□ 1.6
C9orf3-209ENST00000460573 RFC2P35250 354 aa25.02■■□□□ 1.6
C9orf3-209ENST00000460573 TMEM119Q4V9L6 283 aa25.02■■□□□ 1.6
C9orf3-209ENST00000460573 TMEM240Q5SV17 173 aa25.02■■□□□ 1.6
C9orf3-209ENST00000460573 ZNF618Q5T7W0 954 aa25.02■■□□□ 1.6
C9orf3-209ENST00000460573 IER5Q5VY09 327 aa25.02■■□□□ 1.6
C9orf3-209ENST00000460573 LRRC8DQ7L1W4 858 aa25.02■■□□□ 1.6
C9orf3-209ENST00000460573 KIAA0319LQ8IZA0 1049 aa25.02■■□□□ 1.6
C9orf3-209ENST00000460573 LINC01465Q8N7H1 131 aa25.02■■□□□ 1.6
C9orf3-209ENST00000460573 RASSF8Q8NHQ8 419 aa25.02■■□□□ 1.6
C9orf3-209ENST00000460573 SYMPKQ92797 1274 aaKnown RBP25.02■■□□□ 1.6
C9orf3-209ENST00000460573 MAP7D2Q96T17 732 aa25.02■■□□□ 1.6
C9orf3-209ENST00000460573 FAM49AQ9H0Q0 323 aaPredicted RBP25.02■■□□□ 1.6
C9orf3-209ENST00000460573 SUGCTQ9HAC7 445 aa25.02■■□□□ 1.6
C9orf3-209ENST00000460573 PCDHA7Q9UN72 937 aa25.02■■□□□ 1.6
C9orf3-209ENST00000460573 RSPH10B2B2RC85 870 aa25.01■■□□□ 1.59
C9orf3-209ENST00000460573 M0QZ92 97 aa25.01■■□□□ 1.59
C9orf3-209ENST00000460573 RSPH10BP0C881 870 aa25.01■■□□□ 1.59
C9orf3-209ENST00000460573 CDC42EP1Q00587 391 aa25.01■■□□□ 1.59
C9orf3-209ENST00000460573 GRB10Q13322 594 aa25.01■■□□□ 1.59
C9orf3-209ENST00000460573 ZRSR1Q15695 479 aaKnown RBP25.01■■□□□ 1.59
C9orf3-209ENST00000460573 FAM26DQ5JW98 314 aa25.01■■□□□ 1.59
C9orf3-209ENST00000460573 ZBTB10Q96DT7 871 aa25.01■■□□□ 1.59
C9orf3-209ENST00000460573 EPSTI1Q96J88 318 aa25.01■■□□□ 1.59
C9orf3-209ENST00000460573 GUCD1Q96NT3 240 aa25.01■■□□□ 1.59
C9orf3-209ENST00000460573 PNMA5Q96PV4 448 aa25.01■■□□□ 1.59
C9orf3-209ENST00000460573 SEMA6BQ9H3T3 888 aa25.01■■□□□ 1.59
C9orf3-209ENST00000460573 UMODL1Q5DID0 1318 aa25.01■■□□□ 1.59
C9orf3-209ENST00000460573 TMEM265A0A087WTH1 108 aa25■■□□□ 1.59
C9orf3-209ENST00000460573 ARHGEF35A5YM69 484 aa25■■□□□ 1.59
C9orf3-209ENST00000460573 DNAJB2P25686 324 aa25■■□□□ 1.59
C9orf3-209ENST00000460573 SPECC1Q5M775 1068 aa25■■□□□ 1.59
C9orf3-209ENST00000460573 AXDND1Q5T1B0 1012 aaPredicted RBP25■■□□□ 1.59
C9orf3-209ENST00000460573 TCP11Q8WWU5 503 aa25■■□□□ 1.59
C9orf3-209ENST00000460573 MTRQ99707 1265 aa25■■□□□ 1.59
C9orf3-209ENST00000460573 WNT8AQ9H1J5 351 aa25■■□□□ 1.59
C9orf3-209ENST00000460573 BHMT2Q9H2M3 363 aa25■■□□□ 1.59
C9orf3-209ENST00000460573 ATP6V0A4Q9HBG4 840 aa25■■□□□ 1.59
C9orf3-209ENST00000460573 ZBBXA8MT70 800 aa24.99■■□□□ 1.59
C9orf3-209ENST00000460573 E9PMD0 336 aa24.99■■□□□ 1.59
C9orf3-209ENST00000460573 CLCN3P51790 818 aa24.99■■□□□ 1.59
C9orf3-209ENST00000460573 MRPS6P82932 125 aaKnown RBP24.99■■□□□ 1.59
C9orf3-209ENST00000460573 EMC2Q15006 297 aa24.99■■□□□ 1.59
C9orf3-209ENST00000460573 LRRC71Q8N4P6 559 aa24.99■■□□□ 1.59
C9orf3-209ENST00000460573 CDX2Q99626 313 aaPredicted RBP24.99■■□□□ 1.59
C9orf3-209ENST00000460573 A0A087WWV3 80 aa24.98■■□□□ 1.59
C9orf3-209ENST00000460573 KARSQ15046 597 aaKnown RBP24.98■■□□□ 1.59
C9orf3-209ENST00000460573 ADALQ6DHV7 355 aa24.98■■□□□ 1.59
C9orf3-209ENST00000460573 TRAF7Q6Q0C0 670 aa24.98■■□□□ 1.59
C9orf3-209ENST00000460573 PADI6Q6TGC4 694 aa24.98■■□□□ 1.59
C9orf3-209ENST00000460573 USP49Q70CQ1 688 aa24.98■■□□□ 1.59
C9orf3-209ENST00000460573 OTOP2Q7RTS6 562 aa24.98■■□□□ 1.59
C9orf3-209ENST00000460573 MCPH1Q8NEM0 835 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms