RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 HERC6Q8IVU3 1022 aa16.76■□□□□ 0.27
ATG4B-213ENST00000460211 KIAA0319LQ8IZA0 1049 aa16.76■□□□□ 0.27
ATG4B-213ENST00000460211 BANK1Q8NDB2 785 aa16.76■□□□□ 0.27
ATG4B-213ENST00000460211 MAP7D2Q96T17 732 aa16.76■□□□□ 0.27
ATG4B-213ENST00000460211 C1QTNF1Q9BXJ1 281 aa16.76■□□□□ 0.27
ATG4B-213ENST00000460211 NIFKQ9BYG3 293 aaKnown RBP16.76■□□□□ 0.27
ATG4B-213ENST00000460211 TTC12Q9H892 705 aaPredicted RBP16.76■□□□□ 0.27
ATG4B-213ENST00000460211 SEPT9Q9UHD8 586 aaPredicted RBP16.76■□□□□ 0.27
ATG4B-213ENST00000460211 TET1Q8NFU7 2136 aa16.75■□□□□ 0.27
ATG4B-213ENST00000460211 ZBTB42B2RXF5 422 aa16.75■□□□□ 0.27
ATG4B-213ENST00000460211 TAP1Q03518 808 aa16.75■□□□□ 0.27
ATG4B-213ENST00000460211 TMEM62Q0P6H9 643 aa16.75■□□□□ 0.27
ATG4B-213ENST00000460211 ZNF174Q15697 407 aa16.75■□□□□ 0.27
ATG4B-213ENST00000460211 FBXO47Q5MNV8 452 aa16.75■□□□□ 0.27
ATG4B-213ENST00000460211 EFCAB12Q6NXP0 572 aa16.75■□□□□ 0.27
ATG4B-213ENST00000460211 OTUD6AQ7L8S5 288 aa16.75■□□□□ 0.27
ATG4B-213ENST00000460211 EXOC8Q8IYI6 725 aa16.75■□□□□ 0.27
ATG4B-213ENST00000460211 NEK9Q8TD19 979 aa16.75■□□□□ 0.27
ATG4B-213ENST00000460211 MTMR9Q96QG7 549 aa16.75■□□□□ 0.27
ATG4B-213ENST00000460211 JPH2Q9BR39 696 aaPredicted RBP16.75■□□□□ 0.27
ATG4B-213ENST00000460211 EPHX3Q9H6B9 360 aa16.75■□□□□ 0.27
ATG4B-213ENST00000460211 ZSWIM4Q9H7M6 989 aa16.75■□□□□ 0.27
ATG4B-213ENST00000460211 SUGCTQ9HAC7 445 aa16.75■□□□□ 0.27
ATG4B-213ENST00000460211 GINS2Q9Y248 185 aa16.75■□□□□ 0.27
ATG4B-213ENST00000460211 COL4A4P53420 1690 aaPredicted RBP16.75■□□□□ 0.27
ATG4B-213ENST00000460211 MYH9P35579 1960 aaKnown RBP16.75■□□□□ 0.27
ATG4B-213ENST00000460211 PTPRSQ13332 1948 aa16.74■□□□□ 0.27
ATG4B-213ENST00000460211 KDM3AQ9Y4C1 1321 aa16.74■□□□□ 0.27
ATG4B-213ENST00000460211 RBAK-RBAKDNI3L0D1 243 aa16.74■□□□□ 0.27
ATG4B-213ENST00000460211 TLL1O43897 1013 aa16.74■□□□□ 0.27
ATG4B-213ENST00000460211 DNM2P50570 870 aa16.74■□□□□ 0.27
ATG4B-213ENST00000460211 CDC42EP1Q00587 391 aa16.74■□□□□ 0.27
ATG4B-213ENST00000460211 LPIN1Q14693 890 aa16.74■□□□□ 0.27
ATG4B-213ENST00000460211 MTERF2Q49AM1 385 aa16.74■□□□□ 0.27
ATG4B-213ENST00000460211 LARP1BQ659C4 914 aaKnown RBP16.74■□□□□ 0.27
ATG4B-213ENST00000460211 AKT3Q9Y243 479 aa16.74■□□□□ 0.27
ATG4B-213ENST00000460211 PPME1Q9Y570 386 aa16.74■□□□□ 0.27
ATG4B-213ENST00000460211 OR52Z1P0C646 297 aa16.73■□□□□ 0.27
ATG4B-213ENST00000460211 POU3F3P20264 500 aaPredicted RBP16.73■□□□□ 0.27
ATG4B-213ENST00000460211 PDCP20941 246 aa16.73■□□□□ 0.27
ATG4B-213ENST00000460211 DEFB103AP81534 67 aa16.73■□□□□ 0.27
ATG4B-213ENST00000460211 SPIRE1Q08AE8 756 aa16.73■□□□□ 0.27
ATG4B-213ENST00000460211 PAK2Q13177 524 aa16.73■□□□□ 0.27
ATG4B-213ENST00000460211 CUL4AQ13619 759 aa16.73■□□□□ 0.27
ATG4B-213ENST00000460211 TARBP2Q15633 366 aaKnown RBP16.73■□□□□ 0.27
ATG4B-213ENST00000460211 TMEM266Q2M3C6 531 aa16.73■□□□□ 0.27
ATG4B-213ENST00000460211 TCTN1Q2MV58 587 aa16.73■□□□□ 0.27
ATG4B-213ENST00000460211 TMCO2Q7Z6W1 182 aaPredicted RBP16.73■□□□□ 0.27
ATG4B-213ENST00000460211 TPH2Q8IWU9 490 aa16.73■□□□□ 0.27
ATG4B-213ENST00000460211 C4orf19Q8IY42 314 aa16.73■□□□□ 0.27
ATG4B-213ENST00000460211 MYOCDQ8IZQ8 938 aa16.73■□□□□ 0.27
ATG4B-213ENST00000460211 DYDC2Q96IM9 177 aa16.73■□□□□ 0.27
ATG4B-213ENST00000460211 LXNQ9BS40 222 aa16.73■□□□□ 0.27
ATG4B-213ENST00000460211 FTHL17Q9BXU8 183 aa16.73■□□□□ 0.27
ATG4B-213ENST00000460211 WNT7AO00755 349 aa16.72■□□□□ 0.27
ATG4B-213ENST00000460211 GPR182O15218 404 aa16.72■□□□□ 0.27
ATG4B-213ENST00000460211 CLCN3P51790 818 aa16.72■□□□□ 0.27
ATG4B-213ENST00000460211 CRYBB1P53674 252 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-213ENST00000460211 CYP4A11Q02928 519 aa16.72■□□□□ 0.27
ATG4B-213ENST00000460211 GRB10Q13322 594 aa16.72■□□□□ 0.27
ATG4B-213ENST00000460211 CTTNQ14247 550 aaKnown RBP16.72■□□□□ 0.27
ATG4B-213ENST00000460211 RILPL1Q5EBL4 403 aa16.72■□□□□ 0.27
ATG4B-213ENST00000460211 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.72■□□□□ 0.27
ATG4B-213ENST00000460211 LRRC71Q8N4P6 559 aa16.72■□□□□ 0.27
ATG4B-213ENST00000460211 ERMNQ8TAM6 284 aa16.72■□□□□ 0.27
ATG4B-213ENST00000460211 HLA-CQ95604 372 aa16.72■□□□□ 0.27
ATG4B-213ENST00000460211 CEP170P1Q96L14 293 aa16.72■□□□□ 0.27
ATG4B-213ENST00000460211 RAD9AQ99638 391 aa16.72■□□□□ 0.27
ATG4B-213ENST00000460211 EIF2AK1Q9BQI3 630 aaKnown RBP16.72■□□□□ 0.27
ATG4B-213ENST00000460211 OSBPL7Q9BZF2 842 aa16.72■□□□□ 0.27
ATG4B-213ENST00000460211 TMEM60Q9H2L4 133 aa16.72■□□□□ 0.27
ATG4B-213ENST00000460211 CYP26B1Q9NR63 512 aa16.72■□□□□ 0.27
ATG4B-213ENST00000460211 RGL1Q9NZL6 768 aa16.72■□□□□ 0.27
ATG4B-213ENST00000460211 COG5Q9UP83 839 aa16.72■□□□□ 0.27
ATG4B-213ENST00000460211 INSL6Q9Y581 213 aa16.72■□□□□ 0.27
ATG4B-213ENST00000460211 LCHNA4D1U4 455 aa16.71■□□□□ 0.27
ATG4B-213ENST00000460211 RPS6KA5O75582 802 aa16.71■□□□□ 0.27
ATG4B-213ENST00000460211 STBD1O95210 358 aa16.71■□□□□ 0.27
ATG4B-213ENST00000460211 GJB5O95377 273 aa16.71■□□□□ 0.27
ATG4B-213ENST00000460211 VTNP04004 478 aa16.71■□□□□ 0.27
ATG4B-213ENST00000460211 CD52P31358 61 aa16.71■□□□□ 0.27
ATG4B-213ENST00000460211 YWHABP31946 246 aaKnown RBP16.71■□□□□ 0.27
ATG4B-213ENST00000460211 TECP42680 631 aa16.71■□□□□ 0.27
ATG4B-213ENST00000460211 NFX1Q12986 1120 aaKnown RBP16.71■□□□□ 0.27
ATG4B-213ENST00000460211 KIZQ2M2Z5 673 aa16.71■□□□□ 0.27
ATG4B-213ENST00000460211 ANO5Q75V66 913 aa16.71■□□□□ 0.27
ATG4B-213ENST00000460211 SLC7A3Q8WY07 619 aa16.71■□□□□ 0.27
ATG4B-213ENST00000460211 CCDC43Q96MW1 224 aaKnown RBP16.71■□□□□ 0.27
ATG4B-213ENST00000460211 SCLT1Q96NL6 688 aa16.71■□□□□ 0.27
ATG4B-213ENST00000460211 LRFN3Q9BTN0 628 aa16.71■□□□□ 0.27
ATG4B-213ENST00000460211 RAB34Q9BZG1 259 aa16.71■□□□□ 0.27
ATG4B-213ENST00000460211 AGO3Q9H9G7 860 aaKnown RBP16.71■□□□□ 0.27
ATG4B-213ENST00000460211 PADI3Q9ULW8 664 aa16.71■□□□□ 0.27
ATG4B-213ENST00000460211 K7ELQ4 463 aaPredicted RBP16.7■□□□□ 0.26
ATG4B-213ENST00000460211 LAD1O00515 517 aa16.7■□□□□ 0.26
ATG4B-213ENST00000460211 ENPP3O14638 875 aa16.7■□□□□ 0.26
ATG4B-213ENST00000460211 MAFO75444 373 aaPredicted RBP16.7■□□□□ 0.26
ATG4B-213ENST00000460211 SLITRK3O94933 977 aa16.7■□□□□ 0.26
ATG4B-213ENST00000460211 RFC5P40937 340 aa16.7■□□□□ 0.26
ATG4B-213ENST00000460211 POLGP54098 1239 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms