RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 TRMT1LQ7Z2T5 733 aaKnown RBP14□□□□□ -0.17
GPNMB-204ENST00000459927 FAM228AQ86W67 206 aa14□□□□□ -0.17
GPNMB-204ENST00000459927 CKAP2LQ8IYA6 745 aa14□□□□□ -0.17
GPNMB-204ENST00000459927 METTL13Q8N6R0 699 aa14□□□□□ -0.17
GPNMB-204ENST00000459927 PBXIP1Q96AQ6 731 aa14□□□□□ -0.17
GPNMB-204ENST00000459927 ZNF577Q9BSK1 485 aa14□□□□□ -0.17
GPNMB-204ENST00000459927 PHF7Q9BWX1 381 aaPredicted RBP14□□□□□ -0.17
GPNMB-204ENST00000459927 ZMYND12Q9H0C1 365 aa14□□□□□ -0.17
GPNMB-204ENST00000459927 S1PR5Q9H228 398 aa14□□□□□ -0.17
GPNMB-204ENST00000459927 TLR9Q9NR96 1032 aa14□□□□□ -0.17
GPNMB-204ENST00000459927 TMEM161AQ9NX61 479 aa14□□□□□ -0.17
GPNMB-204ENST00000459927 BARX2Q9UMQ3 279 aaPredicted RBP14□□□□□ -0.17
GPNMB-204ENST00000459927 USP15Q9Y4E8 981 aaPredicted RBP14□□□□□ -0.17
GPNMB-204ENST00000459927 TECTAO75443 2155 aa14□□□□□ -0.17
GPNMB-204ENST00000459927 FNDC1Q4ZHG4 1894 aaPredicted RBP13.99□□□□□ -0.17
GPNMB-204ENST00000459927 GOLGA8AA7E2F4 631 aa13.99□□□□□ -0.17
GPNMB-204ENST00000459927 GOLGA8BA8MQT2 603 aa13.99□□□□□ -0.17
GPNMB-204ENST00000459927 FSCN2O14926 492 aa13.99□□□□□ -0.17
GPNMB-204ENST00000459927 MAGEB2O15479 319 aa13.99□□□□□ -0.17
GPNMB-204ENST00000459927 VTNP04004 478 aa13.99□□□□□ -0.17
GPNMB-204ENST00000459927 RCAN1P53805 252 aa13.99□□□□□ -0.17
GPNMB-204ENST00000459927 PLCB3Q01970 1234 aa13.99□□□□□ -0.17
GPNMB-204ENST00000459927 KCNC3Q14003 757 aa13.99□□□□□ -0.17
GPNMB-204ENST00000459927 DUSP6Q16828 381 aa13.99□□□□□ -0.17
GPNMB-204ENST00000459927 BMP2KLQ5H9B9 411 aa13.99□□□□□ -0.17
GPNMB-204ENST00000459927 MCTP2Q6DN12 878 aa13.99□□□□□ -0.17
GPNMB-204ENST00000459927 EFCAB12Q6NXP0 572 aa13.99□□□□□ -0.17
GPNMB-204ENST00000459927 THNSL1Q8IYQ7 743 aa13.99□□□□□ -0.17
GPNMB-204ENST00000459927 COLGALT1Q8NBJ5 622 aa13.99□□□□□ -0.17
GPNMB-204ENST00000459927 VN1R2Q8NFZ6 395 aa13.99□□□□□ -0.17
GPNMB-204ENST00000459927 SUSD6Q92537 303 aa13.99□□□□□ -0.17
GPNMB-204ENST00000459927 CASD1Q96PB1 797 aa13.99□□□□□ -0.17
GPNMB-204ENST00000459927 PPP1R16BQ96T49 567 aa13.99□□□□□ -0.17
GPNMB-204ENST00000459927 CDCA3Q99618 268 aaPredicted RBP13.99□□□□□ -0.17
GPNMB-204ENST00000459927 OSMRQ99650 979 aa13.99□□□□□ -0.17
GPNMB-204ENST00000459927 ADAMTS10Q9H324 1103 aa13.99□□□□□ -0.17
GPNMB-204ENST00000459927 C6orf50Q9HD87 102 aa13.99□□□□□ -0.17
GPNMB-204ENST00000459927 HCSTQ9UBK5 93 aa13.99□□□□□ -0.17
GPNMB-204ENST00000459927 PUF60Q9UHX1 559 aaKnown RBP13.99□□□□□ -0.17
GPNMB-204ENST00000459927 MYH9P35579 1960 aaKnown RBP13.98□□□□□ -0.17
GPNMB-204ENST00000459927 PLXNA4Q9HCM2 1894 aa13.98□□□□□ -0.17
GPNMB-204ENST00000459927 CCDC196A0A1B0GTZ2 297 aa13.98□□□□□ -0.17
GPNMB-204ENST00000459927 ESYT2A0FGR8 921 aa13.98□□□□□ -0.17
GPNMB-204ENST00000459927 TMEM221A6NGB7 291 aa13.98□□□□□ -0.17
GPNMB-204ENST00000459927 M0R296 226 aa13.98□□□□□ -0.17
GPNMB-204ENST00000459927 PRPF3O43395 683 aaKnown RBP13.98□□□□□ -0.17
GPNMB-204ENST00000459927 EDIL3O43854 480 aa13.98□□□□□ -0.17
GPNMB-204ENST00000459927 PSAPP07602 524 aa13.98□□□□□ -0.17
GPNMB-204ENST00000459927 HMGB1P09429 215 aaKnown RBP13.98□□□□□ -0.17
GPNMB-204ENST00000459927 FGFR1P11362 822 aa13.98□□□□□ -0.17
GPNMB-204ENST00000459927 ATF7P17544 494 aaPredicted RBP13.98□□□□□ -0.17
GPNMB-204ENST00000459927 CIITAP33076 1130 aa13.98□□□□□ -0.17
GPNMB-204ENST00000459927 NLRP11P59045 1033 aaKnown RBP13.98□□□□□ -0.17
GPNMB-204ENST00000459927 KRT32Q14532 448 aa13.98□□□□□ -0.17
GPNMB-204ENST00000459927 PKN1Q16512 942 aa13.98□□□□□ -0.17
GPNMB-204ENST00000459927 IER5LQ5T953 404 aa13.98□□□□□ -0.17
GPNMB-204ENST00000459927 SMAP1Q8IYB5 467 aaPredicted RBP13.98□□□□□ -0.17
GPNMB-204ENST00000459927 MRPS27Q92552 414 aaKnown RBP13.98□□□□□ -0.17
GPNMB-204ENST00000459927 RPGRIP1Q96KN7 1286 aa13.98□□□□□ -0.17
GPNMB-204ENST00000459927 TMEM117Q9H0C3 514 aa13.98□□□□□ -0.17
GPNMB-204ENST00000459927 NRBP2Q9NSY0 501 aa13.98□□□□□ -0.17
GPNMB-204ENST00000459927 GABBR1Q9UBS5 961 aa13.98□□□□□ -0.17
GPNMB-204ENST00000459927 LZTS1Q9Y250 596 aa13.98□□□□□ -0.17
GPNMB-204ENST00000459927 KIAA1671Q9BY89 1806 aa13.98□□□□□ -0.17
GPNMB-204ENST00000459927 WDFY4Q6ZS81 3184 aa13.97□□□□□ -0.17
GPNMB-204ENST00000459927 ZSCAN20P17040 1043 aaPredicted RBP13.97□□□□□ -0.17
GPNMB-204ENST00000459927 LAG3P18627 525 aa13.97□□□□□ -0.17
GPNMB-204ENST00000459927 EIF4BP23588 611 aaKnown RBP13.97□□□□□ -0.17
GPNMB-204ENST00000459927 GNA11P29992 359 aa13.97□□□□□ -0.17
GPNMB-204ENST00000459927 PRR16Q569H4 304 aa13.97□□□□□ -0.17
GPNMB-204ENST00000459927 KCNT2Q6UVM3 1135 aa13.97□□□□□ -0.17
GPNMB-204ENST00000459927 ZNF710Q8N1W2 664 aa13.97□□□□□ -0.17
GPNMB-204ENST00000459927 RASGRP4Q8TDF6 673 aa13.97□□□□□ -0.17
GPNMB-204ENST00000459927 KCNB2Q92953 911 aa13.97□□□□□ -0.17
GPNMB-204ENST00000459927 RNF19AQ9NV58 838 aa13.97□□□□□ -0.17
GPNMB-204ENST00000459927 NAP1L2Q9ULW6 460 aaPredicted RBP13.97□□□□□ -0.17
GPNMB-204ENST00000459927 CEP131Q9UPN4 1083 aa13.97□□□□□ -0.17
GPNMB-204ENST00000459927 ZNF318Q5VUA4 2279 aa13.97□□□□□ -0.17
GPNMB-204ENST00000459927 FSD2A1L4K1 749 aa13.96□□□□□ -0.17
GPNMB-204ENST00000459927 CPA1P15085 419 aa13.96□□□□□ -0.17
GPNMB-204ENST00000459927 TMOD1P28289 359 aa13.96□□□□□ -0.17
GPNMB-204ENST00000459927 METAP2P50579 478 aaKnown RBP eCLIP13.96□□□□□ -0.17
GPNMB-204ENST00000459927 KRT17Q04695 432 aa13.96□□□□□ -0.17
GPNMB-204ENST00000459927 APOBRQ0VD83 1088 aa13.96□□□□□ -0.17
GPNMB-204ENST00000459927 ANKRD54Q6NXT1 300 aa13.96□□□□□ -0.17
GPNMB-204ENST00000459927 SYCE2Q6PIF2 218 aa13.96□□□□□ -0.17
GPNMB-204ENST00000459927 Q6ZUG5 572 aa13.96□□□□□ -0.17
GPNMB-204ENST00000459927 SKAP1Q86WV1 359 aa13.96□□□□□ -0.17
GPNMB-204ENST00000459927 LINC01465Q8N7H1 131 aa13.96□□□□□ -0.17
GPNMB-204ENST00000459927 CCDC12Q8WUD4 166 aaPredicted RBP13.96□□□□□ -0.17
GPNMB-204ENST00000459927 NGRNQ9NPE2 291 aaKnown RBP13.96□□□□□ -0.17
GPNMB-204ENST00000459927 SAMM50Q9Y512 469 aa13.96□□□□□ -0.17
GPNMB-204ENST00000459927 MYO10Q9HD67 2058 aa13.95□□□□□ -0.18
GPNMB-204ENST00000459927 HIDE1A8MVS5 230 aa13.95□□□□□ -0.18
GPNMB-204ENST00000459927 HOXA2O43364 376 aa13.95□□□□□ -0.18
GPNMB-204ENST00000459927 ZNF862O60290 1169 aa13.95□□□□□ -0.18
GPNMB-204ENST00000459927 EOMESO95936 686 aa13.95□□□□□ -0.18
GPNMB-204ENST00000459927 TECP42680 631 aa13.95□□□□□ -0.18
GPNMB-204ENST00000459927 USP11P51784 963 aa13.95□□□□□ -0.18
GPNMB-204ENST00000459927 CLCN3P51790 818 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms