RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	FBXO47	Q5MNV8	452 aa		11.47	□□□□□ -0.57
MRPL55-223	ENST00000459783	OTOP2	Q7RTS6	562 aa		11.47	□□□□□ -0.57
MRPL55-223	ENST00000459783	METTL13	Q8N6R0	699 aa		11.47	□□□□□ -0.57
MRPL55-223	ENST00000459783	DBF4B	Q8NFT6	615 aa		11.47	□□□□□ -0.57
MRPL55-223	ENST00000459783	SNX29	Q8TEQ0	813 aa		11.47	□□□□□ -0.57
MRPL55-223	ENST00000459783	HERVK_113	Q902F9	699 aa		11.47	□□□□□ -0.57
MRPL55-223	ENST00000459783	TNPO1	Q92973	898 aa	Known RBP	11.47	□□□□□ -0.57
MRPL55-223	ENST00000459783	CEP170P1	Q96L14	293 aa		11.47	□□□□□ -0.57
MRPL55-223	ENST00000459783	CLIC6	Q96NY7	704 aa		11.47	□□□□□ -0.57
MRPL55-223	ENST00000459783	CELF4	Q9BZC1	486 aa	Known RBP	11.47	□□□□□ -0.57
MRPL55-223	ENST00000459783	ADAMTS10	Q9H324	1103 aa		11.47	□□□□□ -0.57
MRPL55-223	ENST00000459783	SUGCT	Q9HAC7	445 aa		11.47	□□□□□ -0.57
MRPL55-223	ENST00000459783	ANKEF1	Q9NU02	776 aa		11.47	□□□□□ -0.57
MRPL55-223	ENST00000459783	TRPV2	Q9Y5S1	764 aa		11.47	□□□□□ -0.57
MRPL55-223	ENST00000459783	MYH9	P35579	1960 aa	Known RBP	11.47	□□□□□ -0.57
MRPL55-223	ENST00000459783		A0A1W2PPC1	479 aa		11.46	□□□□□ -0.57
MRPL55-223	ENST00000459783	GRXCR1	A8MXD5	290 aa		11.46	□□□□□ -0.57
MRPL55-223	ENST00000459783		E9PMD0	336 aa		11.46	□□□□□ -0.57
MRPL55-223	ENST00000459783	MAGEB2	O15479	319 aa		11.46	□□□□□ -0.57
MRPL55-223	ENST00000459783	DKC1	O60832	514 aa	Known RBP eCLIP	11.46	□□□□□ -0.57
MRPL55-223	ENST00000459783	BMP15	O95972	392 aa		11.46	□□□□□ -0.57
MRPL55-223	ENST00000459783	FGB	P02675	491 aa		11.46	□□□□□ -0.57
MRPL55-223	ENST00000459783	DNM1	Q05193	864 aa	Known RBP	11.46	□□□□□ -0.57
MRPL55-223	ENST00000459783	BECN1	Q14457	450 aa		11.46	□□□□□ -0.57
MRPL55-223	ENST00000459783	EMC2	Q15006	297 aa		11.46	□□□□□ -0.57
MRPL55-223	ENST00000459783	TMEM119	Q4V9L6	283 aa		11.46	□□□□□ -0.57
MRPL55-223	ENST00000459783	HYI	Q5T013	277 aa		11.46	□□□□□ -0.57
MRPL55-223	ENST00000459783	PSRC1	Q6PGN9	363 aa	Predicted RBP	11.46	□□□□□ -0.57
MRPL55-223	ENST00000459783	TMCO2	Q7Z6W1	182 aa	Predicted RBP	11.46	□□□□□ -0.57
MRPL55-223	ENST00000459783	KSR1	Q8IVT5	923 aa		11.46	□□□□□ -0.57
MRPL55-223	ENST00000459783	LINC00301	Q8NCQ3	95 aa		11.46	□□□□□ -0.57
MRPL55-223	ENST00000459783	LINC01599	Q8WXQ3	324 aa		11.46	□□□□□ -0.57
MRPL55-223	ENST00000459783	TMEM143	Q96AN5	459 aa		11.46	□□□□□ -0.57
MRPL55-223	ENST00000459783	RNPC3	Q96LT9	517 aa	Known RBP	11.46	□□□□□ -0.57
MRPL55-223	ENST00000459783	CSRNP2	Q9H175	543 aa		11.46	□□□□□ -0.57
MRPL55-223	ENST00000459783	DAXX	Q9UER7	740 aa	Predicted RBP	11.46	□□□□□ -0.57
MRPL55-223	ENST00000459783	KIAA1024	Q9UPX6	916 aa		11.46	□□□□□ -0.57
MRPL55-223	ENST00000459783	MORC2	Q9Y6X9	1032 aa	Predicted RBP	11.46	□□□□□ -0.57
MRPL55-223	ENST00000459783	ARID2	Q68CP9	1835 aa		11.46	□□□□□ -0.58
MRPL55-223	ENST00000459783	DLL1	O00548	723 aa		11.45	□□□□□ -0.58
MRPL55-223	ENST00000459783	PFKM	P08237	780 aa		11.45	□□□□□ -0.58
MRPL55-223	ENST00000459783	CD52	P31358	61 aa		11.45	□□□□□ -0.58
MRPL55-223	ENST00000459783	GPC3	P51654	580 aa		11.45	□□□□□ -0.58
MRPL55-223	ENST00000459783	NLRP11	P59045	1033 aa	Known RBP	11.45	□□□□□ -0.58
MRPL55-223	ENST00000459783	DEFB103A	P81534	67 aa		11.45	□□□□□ -0.58
MRPL55-223	ENST00000459783	CNKSR3	Q6P9H4	555 aa		11.45	□□□□□ -0.58
MRPL55-223	ENST00000459783	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
MRPL55-223	ENST00000459783	RSPH3	Q86UC2	560 aa		11.45	□□□□□ -0.58
MRPL55-223	ENST00000459783	RPUSD2	Q8IZ73	545 aa	Known RBP	11.45	□□□□□ -0.58
MRPL55-223	ENST00000459783	NME8	Q8N427	588 aa		11.45	□□□□□ -0.58
MRPL55-223	ENST00000459783	ERMN	Q8TAM6	284 aa		11.45	□□□□□ -0.58
MRPL55-223	ENST00000459783	ASAP3	Q8TDY4	903 aa		11.45	□□□□□ -0.58
MRPL55-223	ENST00000459783	LRCH3	Q96II8	777 aa		11.45	□□□□□ -0.58
MRPL55-223	ENST00000459783	EPSTI1	Q96J88	318 aa		11.45	□□□□□ -0.58
MRPL55-223	ENST00000459783	PLIN2	Q99541	437 aa		11.45	□□□□□ -0.58
MRPL55-223	ENST00000459783	OSMR	Q99650	979 aa		11.45	□□□□□ -0.58
MRPL55-223	ENST00000459783	TMX1	Q9H3N1	280 aa		11.45	□□□□□ -0.58
MRPL55-223	ENST00000459783	POLD4	Q9HCU8	107 aa		11.45	□□□□□ -0.58
MRPL55-223	ENST00000459783	GPRC5C	Q9NQ84	441 aa		11.45	□□□□□ -0.58
MRPL55-223	ENST00000459783	BLOC1S4	Q9NUP1	217 aa		11.45	□□□□□ -0.58
MRPL55-223	ENST00000459783	DDX19A	Q9NUU7	478 aa	Known RBP	11.45	□□□□□ -0.58
MRPL55-223	ENST00000459783	DBR1	Q9UK59	544 aa	Known RBP	11.45	□□□□□ -0.58
MRPL55-223	ENST00000459783	NOC2L	Q9Y3T9	749 aa	Known RBP	11.45	□□□□□ -0.58
MRPL55-223	ENST00000459783	SRPRB	Q9Y5M8	271 aa	Known RBP	11.45	□□□□□ -0.58
MRPL55-223	ENST00000459783	MYH15	Q9Y2K3	1946 aa		11.45	□□□□□ -0.58
MRPL55-223	ENST00000459783		A0A087X0B3	334 aa		11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	MGEA5	O60502	916 aa		11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	USO1	O60763	962 aa	Known RBP	11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	CSDE1	O75534	798 aa	Known RBP	11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	PARN	O95453	639 aa	Known RBP	11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	XRCC6	P12956	609 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	MUT	P22033	750 aa		11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	FGFR4	P22455	802 aa		11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	RFC5	P40937	340 aa		11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	FXR1	P51114	621 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	POLG	P54098	1239 aa	Predicted RBP	11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	WDR5	P61964	334 aa	Known RBP	11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	KARS	Q15046	597 aa	Known RBP	11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	LRIT3	Q3SXY7	679 aa		11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	IER5	Q5VY09	327 aa		11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	KRT79	Q5XKE5	535 aa		11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	HAUS3	Q68CZ6	603 aa		11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	TSHZ1	Q6ZSZ6	1077 aa		11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	OTUD6A	Q7L8S5	288 aa		11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	RTN4RL1	Q86UN2	441 aa	Predicted RBP	11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	CABP7	Q86V35	215 aa		11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	FAM228A	Q86W67	206 aa		11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	PRPF31	Q8WWY3	499 aa	Known RBP	11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	BSND	Q8WZ55	320 aa		11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	NACC1	Q96RE7	527 aa		11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	MAP7D2	Q96T17	732 aa		11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	RUSC1	Q9BVN2	902 aa		11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	BHMT2	Q9H2M3	363 aa		11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	ERVK-5	Q9HDB9	667 aa		11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	SUCLA2	Q9P2R7	463 aa	Predicted RBP	11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	PADI3	Q9ULW8	664 aa		11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	AKT3	Q9Y243	479 aa		11.44	□□□□□ -0.58
MRPL55-223	ENST00000459783	GINS2	Q9Y248	185 aa		11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms