RNA–Protein interactions for RNA: ENST00000458893.1

SNORD42B-201, Transcript of small nucleolar RNA, C/D box 42B, humanhuman

BASIC

Gene SNORD42B, Length 67 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42B-201ENST00000458893 ELOA2Q8IYF1 753 aaPredicted RBP0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 DCP1BQ8IZD4 617 aaKnown RBP0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 ADCY4Q8NFM4 1077 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 TTLL11Q8NHH1 800 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 DPF3Q92784 378 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 LPPQ93052 612 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 PBXIP1Q96AQ6 731 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 ZNF428Q96B54 188 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 LYZL4Q96KX0 146 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 TCF25Q9BQ70 676 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 GBP3Q9H0R5 595 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 HIPK2Q9H2X6 1198 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 FAM86C1Q9NVL1 165 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 ASB6Q9NWX5 421 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 TRPM5Q9NZQ8 1165 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 FLRT1Q9NZU1 646 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 RCAN3Q9UKA8 241 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 CDC42EP3Q9UKI2 254 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 WWC3Q9ULE0 1092 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 X6R8D5 127 aa0.71□□□□□ -2.3
SNORD42B-201ENST00000458893 GAGE12BA1L429 117 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 GAGE12HA6NDE8 117 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 ZNF839A8K0R7 811 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 LINC01565O15544 149 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 SMAD6O43541 496 aaKnown RBP0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 PPM1BO75688 479 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 C1QL1O75973 258 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 IL18BPO95998 194 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 PF4P02776 101 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 ITGAMP11215 1152 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 FAHP16930 419 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 HK1P19367 917 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 BMPR1AP36894 532 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 MPLP40238 635 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 BCL6P41182 706 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 NR4A2P43354 598 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 NOVP48745 357 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 PMS1P54277 932 aaKnown RBP0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 KRTAP10-3P60369 221 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 SSBP2P81877 361 aaPredicted RBP0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 MRPS35P82673 323 aaKnown RBP0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 HOXA4Q00056 320 aaPredicted RBP0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 HGFACQ04756 655 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 ERV3-1Q14264 604 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 EIF4HQ15056 248 aaKnown RBP0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 NPY5RQ15761 445 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 PAN2Q504Q3 1202 aaKnown RBP0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 DCAF17Q5H9S7 520 aaPredicted RBP0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 AXDND1Q5T1B0 1012 aaPredicted RBP0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 CD276Q5ZPR3 534 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 CYP4F22Q6NT55 531 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 HTR3DQ70Z44 454 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 LARP4Q71RC2 724 aaKnown RBP eCLIP0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 CXXC5Q7LFL8 322 aaKnown RBP0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 TMC7Q7Z402 723 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 KIAA0825Q8IV33 1275 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 GOLM1Q8NBJ4 401 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 PHC3Q8NDX5 983 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 MDGA1Q8NFP4 955 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 DNASE2BQ8WZ79 361 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 ST8SIA2Q92186 375 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 GCDHQ92947 438 aaPredicted RBP0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 WBP2Q969T9 261 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 RPL10LQ96L21 214 aaKnown RBP0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 DCLRE1CQ96SD1 692 aaKnown RBP0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 MCMBPQ9BTE3 642 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 KCNH6Q9H252 994 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 EPB41L1Q9H4G0 881 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 AKIP1Q9NQ31 210 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 WHRNQ9P202 907 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 ARHGAP28Q9P2N2 729 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 ARPP21Q9UBL0 812 aaPredicted RBP0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 BTBD3Q9Y2F9 522 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 SUGT1Q9Y2Z0 365 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 ZNF451Q9Y4E5 1061 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 PCDHAC2Q9Y5I4 1007 aa0.7□□□□□ -2.3
SNORD42B-201ENST00000458893 A0A0G2JNJ9 132 aa0.69□□□□□ -2.3
SNORD42B-201ENST00000458893 UBE2QL1A1L167 161 aa0.69□□□□□ -2.3
SNORD42B-201ENST00000458893 FAM90A10PA6NDY2 464 aa0.69□□□□□ -2.3
SNORD42B-201ENST00000458893 ANTXRLA6NF34 631 aa0.69□□□□□ -2.3
SNORD42B-201ENST00000458893 UNC119BA6NIH7 251 aa0.69□□□□□ -2.3
SNORD42B-201ENST00000458893 FAM90A8PA6NJQ4 464 aa0.69□□□□□ -2.3
SNORD42B-201ENST00000458893 GRXCR1A8MXD5 290 aa0.69□□□□□ -2.3
SNORD42B-201ENST00000458893 TNFRSF10CO14798 259 aa0.69□□□□□ -2.3
SNORD42B-201ENST00000458893 SLC27A2O14975 620 aa0.69□□□□□ -2.3
SNORD42B-201ENST00000458893 TLR3O15455 904 aaKnown RBP0.69□□□□□ -2.3
SNORD42B-201ENST00000458893 H2AFYO75367 372 aaKnown RBP0.69□□□□□ -2.3
SNORD42B-201ENST00000458893 NCR1O76036 304 aa0.69□□□□□ -2.3
SNORD42B-201ENST00000458893 ATE1O95260 518 aa0.69□□□□□ -2.3
SNORD42B-201ENST00000458893 ALPLP05186 524 aa0.69□□□□□ -2.3
SNORD42B-201ENST00000458893 FAM90A13PP0C7W8 464 aa0.69□□□□□ -2.3
SNORD42B-201ENST00000458893 FAM90A24PP0C7X0 464 aa0.69□□□□□ -2.3
SNORD42B-201ENST00000458893 SPATA31D3P0C874 917 aa0.69□□□□□ -2.3
SNORD42B-201ENST00000458893 GBP2P32456 591 aaPredicted RBP0.69□□□□□ -2.3
SNORD42B-201ENST00000458893 MCM4P33991 863 aa0.69□□□□□ -2.3
SNORD42B-201ENST00000458893 WASP42768 502 aa0.69□□□□□ -2.3
SNORD42B-201ENST00000458893 PTTG1IPP53801 180 aa0.69□□□□□ -2.3
SNORD42B-201ENST00000458893 SRPK2P78362 688 aaKnown RBP0.69□□□□□ -2.3
SNORD42B-201ENST00000458893 ATP2C1P98194 919 aaPredicted RBP0.69□□□□□ -2.3
SNORD42B-201ENST00000458893 GRB10Q13322 594 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms