RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 ZNHIT6Q9NWK9 470 aaKnown RBP17.97■□□□□ 0.47
CAPN13-203ENST00000458085 NFASCO94856 1347 aa17.97■□□□□ 0.47
CAPN13-203ENST00000458085 SOWAHBA6NEL2 793 aa17.97■□□□□ 0.47
CAPN13-203ENST00000458085 TISP43B9A030 160 aa17.97■□□□□ 0.47
CAPN13-203ENST00000458085 RPL13P26373 211 aaKnown RBP17.97■□□□□ 0.47
CAPN13-203ENST00000458085 HNRNPH3P31942 346 aaKnown RBP17.97■□□□□ 0.47
CAPN13-203ENST00000458085 Q3C1V9 767 aa17.97■□□□□ 0.47
CAPN13-203ENST00000458085 DCAF17Q5H9S7 520 aaPredicted RBP17.97■□□□□ 0.47
CAPN13-203ENST00000458085 ZNF710Q8N1W2 664 aa17.97■□□□□ 0.47
CAPN13-203ENST00000458085 DNERQ8NFT8 737 aa17.97■□□□□ 0.47
CAPN13-203ENST00000458085 RDM1Q8NG50 284 aa17.97■□□□□ 0.47
CAPN13-203ENST00000458085 IQCDQ96DY2 449 aa17.97■□□□□ 0.47
CAPN13-203ENST00000458085 CCDC43Q96MW1 224 aaKnown RBP17.97■□□□□ 0.47
CAPN13-203ENST00000458085 ARHGAP20Q9P2F6 1191 aa17.97■□□□□ 0.47
CAPN13-203ENST00000458085 SLC9A2Q9UBY0 812 aa17.97■□□□□ 0.47
CAPN13-203ENST00000458085 UBE4BO95155 1302 aa17.96■□□□□ 0.47
CAPN13-203ENST00000458085 SOX10P56693 466 aa17.96■□□□□ 0.47
CAPN13-203ENST00000458085 ACTR2P61160 394 aa17.96■□□□□ 0.47
CAPN13-203ENST00000458085 STXBP2Q15833 593 aa17.96■□□□□ 0.47
CAPN13-203ENST00000458085 DPY19L2P1Q6NXN4 242 aa17.96■□□□□ 0.47
CAPN13-203ENST00000458085 PDXDC1Q6P996 788 aa17.96■□□□□ 0.47
CAPN13-203ENST00000458085 SEPT14Q6ZU15 432 aa17.96■□□□□ 0.47
CAPN13-203ENST00000458085 SLC35C1Q96A29 364 aa17.96■□□□□ 0.47
CAPN13-203ENST00000458085 IWS1Q96ST2 819 aa17.96■□□□□ 0.47
CAPN13-203ENST00000458085 GBP3Q9H0R5 595 aa17.96■□□□□ 0.47
CAPN13-203ENST00000458085 ANKEF1Q9NU02 776 aa17.96■□□□□ 0.47
CAPN13-203ENST00000458085 LARSQ9P2J5 1176 aaKnown RBP17.96■□□□□ 0.47
CAPN13-203ENST00000458085 RBPJLQ9UBG7 517 aa17.96■□□□□ 0.47
CAPN13-203ENST00000458085 SLC16A3O15427 465 aaKnown RBP17.96■□□□□ 0.47
CAPN13-203ENST00000458085 STAM2O75886 525 aa17.96■□□□□ 0.47
CAPN13-203ENST00000458085 URI1O94763 535 aaPredicted RBP17.96■□□□□ 0.47
CAPN13-203ENST00000458085 EPB41P11171 864 aaKnown RBP17.96■□□□□ 0.47
CAPN13-203ENST00000458085 ACTN1P12814 892 aa17.96■□□□□ 0.47
CAPN13-203ENST00000458085 XRCC5P13010 732 aaKnown RBP17.96■□□□□ 0.47
CAPN13-203ENST00000458085 PLS3P13797 630 aa17.96■□□□□ 0.47
CAPN13-203ENST00000458085 CASQ1P31415 396 aa17.96■□□□□ 0.47
CAPN13-203ENST00000458085 CYP2J2P51589 502 aa17.96■□□□□ 0.47
CAPN13-203ENST00000458085 GNPTABQ3T906 1256 aa17.96■□□□□ 0.47
CAPN13-203ENST00000458085 ARHGAP29Q52LW3 1261 aa17.96■□□□□ 0.47
CAPN13-203ENST00000458085 ABHD15Q6UXT9 468 aa17.96■□□□□ 0.47
CAPN13-203ENST00000458085 CYFIP1Q7L576 1253 aa17.96■□□□□ 0.47
CAPN13-203ENST00000458085 SMAP1Q8IYB5 467 aaPredicted RBP17.96■□□□□ 0.47
CAPN13-203ENST00000458085 CDHR1Q96JP9 859 aa17.96■□□□□ 0.47
CAPN13-203ENST00000458085 FBXO40Q9UH90 709 aa17.96■□□□□ 0.47
CAPN13-203ENST00000458085 PFASO15067 1338 aa17.95■□□□□ 0.46
CAPN13-203ENST00000458085 ZNF263O14978 683 aa17.95■□□□□ 0.46
CAPN13-203ENST00000458085 EIF3JO75822 258 aaKnown RBP17.95■□□□□ 0.46
CAPN13-203ENST00000458085 AFPP02771 609 aaKnown RBP17.95■□□□□ 0.46
CAPN13-203ENST00000458085 SLC9A1P19634 815 aa17.95■□□□□ 0.46
CAPN13-203ENST00000458085 POLR2FP61218 127 aaKnown RBP17.95■□□□□ 0.46
CAPN13-203ENST00000458085 CDK17Q00537 523 aa17.95■□□□□ 0.46
CAPN13-203ENST00000458085 NFIL3Q16649 462 aa17.95■□□□□ 0.46
CAPN13-203ENST00000458085 TCERG1LQ5VWI1 586 aa17.95■□□□□ 0.46
CAPN13-203ENST00000458085 GPAT2Q6NUI2 795 aa17.95■□□□□ 0.46
CAPN13-203ENST00000458085 CACNA2D4Q7Z3S7 1137 aa17.95■□□□□ 0.46
CAPN13-203ENST00000458085 MAF1Q9H063 256 aa17.95■□□□□ 0.46
CAPN13-203ENST00000458085 DMAC2Q9NW81 257 aa17.95■□□□□ 0.46
CAPN13-203ENST00000458085 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.95■□□□□ 0.46
CAPN13-203ENST00000458085 V9GYY5 206 aaPredicted RBP17.95■□□□□ 0.46
CAPN13-203ENST00000458085 SCN4AP35499 1836 aa17.95■□□□□ 0.46
CAPN13-203ENST00000458085 RCCD1A6NED2 376 aa17.95■□□□□ 0.46
CAPN13-203ENST00000458085 POTEB2H3BUK9 544 aa17.95■□□□□ 0.46
CAPN13-203ENST00000458085 PEX3P56589 373 aa17.95■□□□□ 0.46
CAPN13-203ENST00000458085 CYP27A1Q02318 531 aa17.95■□□□□ 0.46
CAPN13-203ENST00000458085 FAM102BQ5T8I3 360 aa17.95■□□□□ 0.46
CAPN13-203ENST00000458085 STXBP4Q6ZWJ1 553 aa17.95■□□□□ 0.46
CAPN13-203ENST00000458085 ARMC9Q7Z3E5 817 aa17.95■□□□□ 0.46
CAPN13-203ENST00000458085 FAM186BQ8IYM0 893 aa17.95■□□□□ 0.46
CAPN13-203ENST00000458085 GANQ9H2C0 597 aa17.95■□□□□ 0.46
CAPN13-203ENST00000458085 CEP72Q9P209 647 aa17.95■□□□□ 0.46
CAPN13-203ENST00000458085 SLC16A4O15374 487 aa17.94■□□□□ 0.46
CAPN13-203ENST00000458085 TLR2O60603 784 aa17.94■□□□□ 0.46
CAPN13-203ENST00000458085 PGK2P07205 417 aa17.94■□□□□ 0.46
CAPN13-203ENST00000458085 PSAPP07602 524 aa17.94■□□□□ 0.46
CAPN13-203ENST00000458085 NCBP1Q09161 790 aaKnown RBP17.94■□□□□ 0.46
CAPN13-203ENST00000458085 ZNF569Q5MCW4 686 aa17.94■□□□□ 0.46
CAPN13-203ENST00000458085 LDLRAD1Q5T700 205 aa17.94■□□□□ 0.46
CAPN13-203ENST00000458085 HS2ST1Q7LGA3 356 aa17.94■□□□□ 0.46
CAPN13-203ENST00000458085 SYCP3Q8IZU3 236 aa17.94■□□□□ 0.46
CAPN13-203ENST00000458085 FAM133AQ8N9E0 248 aa17.94■□□□□ 0.46
CAPN13-203ENST00000458085 KIFC3Q9BVG8 833 aa17.94■□□□□ 0.46
CAPN13-203ENST00000458085 ZNF408Q9H9D4 720 aa17.94■□□□□ 0.46
CAPN13-203ENST00000458085 METTL14Q9HCE5 456 aaKnown RBP17.94■□□□□ 0.46
CAPN13-203ENST00000458085 MYH9P35579 1960 aaKnown RBP17.94■□□□□ 0.46
CAPN13-203ENST00000458085 ARID2Q68CP9 1835 aa17.94■□□□□ 0.46
CAPN13-203ENST00000458085 SLU7O95391 586 aaKnown RBP17.93■□□□□ 0.46
CAPN13-203ENST00000458085 EDNRBP24530 442 aa17.93■□□□□ 0.46
CAPN13-203ENST00000458085 ICAM3P32942 547 aa17.93■□□□□ 0.46
CAPN13-203ENST00000458085 MAP1SQ66K74 1059 aaPredicted RBP17.93■□□□□ 0.46
CAPN13-203ENST00000458085 EEPD1Q7L9B9 569 aa17.93■□□□□ 0.46
CAPN13-203ENST00000458085 HAUS6Q7Z4H7 955 aa17.93■□□□□ 0.46
CAPN13-203ENST00000458085 CCDC170Q8IYT3 715 aa17.93■□□□□ 0.46
CAPN13-203ENST00000458085 SLC35F6Q8N357 371 aa17.93■□□□□ 0.46
CAPN13-203ENST00000458085 BSNDQ8WZ55 320 aa17.93■□□□□ 0.46
CAPN13-203ENST00000458085 CEP170P1Q96L14 293 aa17.93■□□□□ 0.46
CAPN13-203ENST00000458085 EIF3CLB5ME19 914 aaKnown RBP17.93■□□□□ 0.46
CAPN13-203ENST00000458085 KIF5CO60282 957 aa17.93■□□□□ 0.46
CAPN13-203ENST00000458085 CYLC1P35663 651 aaPredicted RBP17.93■□□□□ 0.46
CAPN13-203ENST00000458085 PSMC2P35998 433 aaKnown RBP17.93■□□□□ 0.46
CAPN13-203ENST00000458085 EIF4A3P38919 411 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms